Mirounga leonina (Southern elephant seal): 118008954
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Entry
118008954 CDS
T07472
Symbol
CNTN1
Name
(RefSeq) contactin-1 isoform X1
KO
K06759
contactin 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118008954 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mlx04515
]
118008954 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mlx00537
]
118008954 (CNTN1)
Cell adhesion molecules [BR:
mlx04515
]
Immunoglobulin superfamily
Contactins
118008954 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mlx00537
]
Others
118008954 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Sp38
C2-set_2
ChitinaseA_N
Ig_J_second
NDNF
Motif
Other DBs
NCBI-GeneID:
118008954
NCBI-ProteinID:
XP_034858762
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MKMWLLVSHLVIVSFTTCLSEFTWYRRYGHGVSEEDKGFGPIFEEQPINTIYPEESPEGK
VSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASNNY
GMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF
ITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPY
PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI
QLEDEGTYECEAENNRGKDKYQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIP
TIRWLKNGYAYHKGELRLYDVTFDNAGMYQCIAENTHGAIYANAELKILALAPTFEMNPM
KKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGG
IYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIW
SFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVV
RGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE
GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSN
RELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMRPSTAF
QVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVVEKIVESY
QIRYRAAQDKEAAAHRVQVTSQEYSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFT
KKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTHKH
SIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGVSTLSPSLLGLLLPALGIIVYLAV
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtggttgcttgtcagtcaccttgtgatagtatcttttacaacttgtttatca
gagtttacatggtacagaagatatggtcatggagtttctgaggaagataaaggatttgga
ccaatttttgaagagcagccaatcaataccatttatccagaggaatcaccagaaggaaaa
gtttcactaaactgtagggcacgagccagccctttcccagtttacaaatggagaatgaat
aatggggatattgatctgacaagtgatcggtacagtatggtaggtggaaaccttgttatc
aacaaccctgacaaacagaaagatgctggaatatattactgcttagcatcaaataactat
gggatggtcagaagcacggaagcaaccctgagctttggatatcttgaccctttcccacct
gaggagcgtcctgaggtcagggtgaaagaagggaagggaatggtgcttctctgtgatcct
ccataccatttcccagatgatcttagctaccgctggcttctaaatgaatttcctgtattt
atcacaatggataaacgaagatttgtgtctcagacaaatggaaatctctacattgcaaat
gtcgaggcatcagacaaaggcaattattcctgctttgtatccagtccttctattacaaag
agtgtgttcagcaaatttatcccactcattccactacctgaacgaacaacaaaaccatat
cctgctgatatcgtagttcagttcaaggacatatatgcactgatgggccaaaatgtgacg
ttagagtgtttcgcacttggcaatcctgttcctgatatccgatggcggaaggtcctagaa
ccaatgccaagtactgctgagatcagcacctctggggctgtcctcaagatcttcaatatt
cagctagaagatgaaggcacatatgaatgtgaggctgagaacaatagaggaaaggataaa
taccaggcaagaatttatgttcaagcatttcctgagtgggtagaacatatcaatgacaca
gaggtggatataggcagtgatctctattggccttgtgtggccacagggaagcccatcccc
acaatccgatggctgaaaaatggatatgcgtatcataaaggggaattgagactgtatgat
gtgacttttgacaatgccggcatgtaccagtgcatagctgaaaacacacatggagccatt
tatgcaaatgccgagttgaagatcttggctttggctccaacttttgaaatgaatcctatg
aagaaaaagatcttggctgctaaaggaggaagggtcataattgaatgcaaacctaaagca
gcacctaaaccaaaattttcatggagtaaaggaacagagtggcttgtcaatagcagcaga
atactcatttgggaagatggcagcttggaaataaataacatcacaaggaatgatggcggt
atctatacgtgctttgcagaaaataatagagggagggctaataacactggcactcttgtt
attacagatcccacccgaattatattggccccaattaatgctgatattactgttggagaa
aatgccaccatgcagtgtgctgcctcctttgatcccgccctggatctcacatttatttgg
tccttcaatggctatgtgatcgattttaacaaagagaacattcattaccagcggaatttt
atgctggattccaatggggaactgcttatccgaaatgcccagctgaagcatgctggtaga
tacacatgtaccgctcagacaatcgtggacaattcttcagcttcagctgaccttgttgtt
cgaggccctccaggccctccaggtggtctacgaatagaagacattagagccacttctgtg
gctcttacgtggagccgtggttcagacaatcatagtcctatatcgaaatacactattcag
accaagactattctttcagatgactggaaagatgcaaagacagatcccccaatcattgaa
ggaaatatggaggcagcaagagcagtggatttaatcccatggatggagtatgaatttcgt
gtggtagcaaccaatactttgggtataggagaacccagtataccatcaaacaaaattaaa
acagatggtgctgcaccaaatgtggctccttcagatgtaggaggtggaggggggagcaac
agagagctgaccataacatgggtgcctttgtcaagagaataccactacggcaacaatttt
ggttacatagtggcgtttaagccctttgatggtgaagaatggaaaaaagttacagttact
aatccagatactggccgctatgtccataaagatgagaccatgcgcccatctactgcattc
caagttaaagttaaggcctttaacaacaaaggagatggaccttacagcctcacagcagtc
attaattcagcacaagatgctcccagtgaagccccaacagaagtaggtgtaaaagtctta
tcatcttctgagatatctgttcattgggagcatgttgtagaaaaaatagtggaaagctat
cagattcggtaccgggctgcccaggacaaagaagcagctgcacacagagttcaagtcacc
agccaagagtactcagccaggctagagaaccttctgcccgatacccagtactttgtggaa
gtcagggcctgcaatagtgcagggtgtgggcctcccagtgacatgattgagaccttcacc
aagaaagcacctccaagccagccgccaaggatcatcagttccgtaaggtctggttcacgc
tacataatcacctgggatcatgtggtcgcactatcaaatgaatcgacagtgacagggtat
aaggtactctatagacctgatggccagcatgatggcaagctgtattcaactcataaacac
tccatagaagtcccaatccccagggatggagagtatgttgtagaggttcgtgcacacagt
gatggaggagatggagtagtgtctcaagtcaaaatttcaggtgtgtccaccctatcacca
agtcttctcggcttactgctgcctgcccttggcatcattgtctacttggcagtctga
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