Mirounga leonina (Southern elephant seal): 118009335
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Entry
118009335 CDS
T07472
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04622
RIG-I-like receptor signaling pathway
mlx05161
Hepatitis B
mlx05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118009335 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
118009335 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
118009335 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118009335 (DDX3X)
03041 Spliceosome [BR:
mlx03041
]
118009335 (DDX3X)
03036 Chromosome and associated proteins [BR:
mlx03036
]
118009335 (DDX3X)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118009335 (DDX3X)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118009335 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
118009335 (DDX3X)
Spliceosome [BR:
mlx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118009335 (DDX3X)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
118009335 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
118009335
NCBI-ProteinID:
XP_034859129
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRSGFGKFE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEEDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSSFSSSRASSSRSGGGGHGSSRAFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttccgataatcagagtggaggaagtacagcaagcaaggggcgctatattcct
cctcacttaaggaacagagaagctactaaaggattctacgataaagacagttcagggtgg
agttctagtaaggataaggatgcgtacagcagttttggatctcgtagtgattcaagaggg
aagtctagtttctttagtgatcgtggaagtggatcaaggggaaggtttgatgatcgtgga
cggagtgactatgatggcattggcagccgtggtgacagaagtggttttggcaaatttgaa
cgtggtggaaatagtcgctggtgtgacaaatcagatgaagatgattggtcaaaaccactc
ccaccaagtgaacgcttggaacaggaactcttttctggaggaaacactgggattaacttt
gagaaatatgacgacattccagttgaggcaacaggcaacaactgtcctccacacattgaa
agtttcagtgatgttgagatgggagaaattattatgggaaacattgagcttactcgttat
actcgcccaactccagtgcaaaagcatgctattcctattatcaaagagaaaagagacttg
atggcttgtgctcaaacagggtctggaaaaactgcagcgtttctcttacccatcttgagt
cagatttattcagatggtccaggcgaggctttgagggccatgaaggaaaatggaaggtac
ggacgtcgcaagcaatacccaatctccttggtattagcaccaactagagaattggcagta
cagatctacgaggaagccaggaaattttcataccgatctagagttcgaccttgcgtggtt
tatggtggtgctgatattggtcaacagattcgagacttagagcgtggatgccacttgtta
gtagctactccaggacgtctagtggatatgatggaaagaggaaagattggattagacttt
tgcaaatacttggtgttagatgaagctgatcggatgttggatatgggttttgaacctcag
atacgtagaatagttgaagaagatactatgccaccaaagggtgtccgccacactatgatg
tttagtgctactttccctaaggaaatacagatgctggctcgtgatttcttagatgagtat
atctttttagctgtaggaagagttggctctacctctgagaatattacacaaaaagtagtt
tgggtggaagagtccgacaaacggtcatttttgcttgaccttctgaatgcaacaggcaag
gattcactgaccttagtgtttgtggagaccaaaaagggtgcagattctctggaagatttc
ttgtaccacgaaggatatgcttgtaccagtattcatggagaccgatctcagagagataga
gaagaggcccttcaccagttccgctcaggaaaaagcccaattctagtggctacagcagta
gcagcaagaggactggatatttcaaatgtgaaacatgttatcaattttgacttgccaagt
gatattgaagaatatgtacatcgcattggccgtacaggacgtgtagggaaccttggcctt
gccacctcattctttaacgagaggaatataaatattaccaaggatttgttggatcttctt
gttgaagcaaaacaagaagtgccatcttggttagaaaacatggcttatgaacaccactac
aagggtagcagtcgtggacgatctaagagtagtagattcagtggaggattcggcgcccga
gactatcgacaaagcagcggtgccagcagttccagcttcagcagcagccgcgcaagcagc
agccgcagtggtggaggcggccacggcagcagcagggcatttggtggaggtggctatgga
ggcttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtgg
ggtaactga
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