Mirounga leonina (Southern elephant seal): 118009349
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Entry
118009349 CDS
T07472
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118009349 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mlx01009
]
118009349 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mlx04515
]
118009349 (PCDH20)
Protein phosphatases and associated proteins [BR:
mlx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118009349 (PCDH20)
Cell adhesion molecules [BR:
mlx04515
]
Cadherins
Protocadherins
118009349 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
118009349
NCBI-ProteinID:
XP_034859146
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MRGRGNARSSRALAVSWRPATWLLRLDMGRLSRPRSSTSHRNLPHLFLFFLFVGPFTCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPRAAGRQDQLSQLPERPVAERTPPLSFS
LASRGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGAWGGSISISSSPSSDSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENAPINTRLAIEHAAMDPDIG
TNGVQTYRLLDYHRMFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGGSPPL
LGSATLTIGITDINDNCPLFTDSQINVTVFGNATVGTPVAAVQALDRDLGTNAQITYAYS
QKVPQASKDLFHLDETTGVIKLFSKIGGSVLQTHKLTILANGPGCIPAVTTALVTIIKVI
FRPPEIVPRYIANEVDGVVYLRELEPINTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSPY
KPYNNEYLLETTKPMDYELQQFYEIAVVAWNSEGFHVKKIIKVQLLDDNDNAPIFLQPLL
ELTIEENNAPHAFLTKLYATDADSEERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDRE
EKEKYRYTVRAVDSGKPPRESVATVVLTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGEP
ALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVEAASCVPTLVTLSVISLGS
VTLVTGMGIYICLRRGKKHHREDENLEVQIPLKGKTGLHMRERKPMAISNI
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgagggaatgcgcgcagctcgcgggccctagcagtgagctggcgcccggcg
acctggctcctgcgcctggatatggggcgtctaagtcgtcccaggagcagcaccagccac
agaaacctgccgcatctgtttctgtttttcctcttcgtgggacccttcacctgcctcgcg
agttacagccgggccacggagcttctgtacagcctgaacgagggactgcccgcgggggtg
ctcatcggcagcctggccgaggacctgcggctggtgccccgcgccgccgggaggcaggac
cagttgtcgcagctgccggagcgccccgtcgcggagcggaccccccctctctccttcagc
ctggcctcccggggactgagtggccagtacgtgaccctggacaaccgttccggggagctg
cacacttctgcccaggagatcgaccgggaggccctgtgtcttgaaggaggtggaggagcg
tggggtggcagcatttccatctcctcctccccttcctctgactcttgtcttttgcttttg
gatgtactggtcctgcctcaggaatactttaggtttgtgaaggtgaaaatcgctatccgg
gacatcaatgacaatgccccgcagttccccgtttcccaaatctcggtttgggtcccagaa
aatgcacctataaacacccggctggccatagagcatgctgccatggacccagatataggc
acgaacggggtgcagacctaccgcttactggactaccatcgcatgttcaccctggacgtg
gaggagaatgagaatggggagcgcactccctacctaattgtcatgggactgttggatagg
gagacccaggaccagtacgtgagcatcatcatagcggaggatggcgggtctccaccactg
ttgggcagcgccaccctcaccatcggcataactgacattaatgacaattgccctctcttc
acggactcacaaatcaatgtcactgtgttcgggaatgctacagtgggcaccccggttgca
gctgtccaggccctggatagagacttgggaaccaatgctcagatcacttacgcctacagc
cagaaagttccacaagcatccaaggatttattccatctggatgaaaccaccggagtcatt
aaacttttcagtaagattgggggcagtgttctgcaaacgcacaagctcaccatccttgct
aacgggccaggctgcatccctgctgtgaccacggccctggtgaccattatcaaagtcatt
ttcagaccacctgaaattgttcctcgttatatagcaaatgaggtagatggtgttgtttac
ctgagagaactggagcctattaacactccgattgcattcttcaccataagagatccagaa
ggtaaatacaaggtgaactgctacctggacggtgaaggaccatttaggctatcaccctac
aaaccgtacaataatgaatatttgctggaaaccacaaaaccgatggactatgagctacag
cagttctatgaaatagctgtggtggcctggaactctgagggatttcatgtcaaaaaaatt
attaaagtgcaacttttagatgacaatgacaatgctcctattttcctgcagcccttgctg
gaactaactattgaagaaaacaacgcaccccatgcctttttgactaagctgtatgcgacg
gatgctgacagtgaagagagaggccaagtttcctatttcctgggacctgatgccccctca
tatttttccttagacagtgtgacaggaattctgacagtttccactcagctggaccgagaa
gagaaagaaaagtacaggtacacagtcagagctgttgactctgggaagccgcccagagaa
tcagttgccactgtggttctcaccgtgctggataaaaatgacaatagccctaggtttatc
aacaaggacttcagcttttttgtgccagaaaacttcccaggatatggtgaaatcggggta
attagtgtcacagatgccgatgctggacgaaatggatgggttgccctctcggtggtgaac
cagagtgatatttttgtcatagacacaggaaagggcatgttgagagctaaagtctctttg
gacagagagcagcaaagctcctatacgttgtgggtcgaagctgttgatgggggtgagcct
gccctctcttcgactgcaaaaatcacaattctccttctagatatcaatgacaaccctcct
ctggttctatttcctcagtccaacatgtcctacctgttggtcctgccttctactctcccc
ggctccccagttacagaggtctatgctgttgacaaagacacaggcatgaacgctgtcata
gcctacagcatcataggaagaagaggtccgaggcctgagtcctttaggattgaccctaaa
accggcaacattactttggaagaggcattgctgcagacagactatgggctccatcgttta
ctggtgaaagtgagtgaccatggttatcccgaacctctccattccacggtcatggtgaac
ctgtttgtcaatgacacggtcagtaacgagagctacattgagagtcttttaagaaaggag
ccagaaattaatatagaggagaaagaaccacagatctcaatagaaccaactcataggaaa
gtcgaggctgcgtcctgtgtgcccaccctagtgactctgtctgtcataagcttgggttct
gtcacactggtaacagggatgggcatatacatctgtttaaggagagggaaaaagcatcac
agggaagacgaaaatttggaagtacaaattccactcaaaggaaaaactggcttgcatatg
agagagaggaaaccaatggctatttctaatatttga
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