Mirounga leonina (Southern elephant seal): 118009920
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Entry
118009920 CDS
T07472
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03410
Base excision repair
mlx05166
Human T-cell leukemia virus 1 infection
mlx05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118009920 (POLB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
118009920 (POLB)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
118009920 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118009920 (POLB)
Enzymes [BR:
mlx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118009920 (POLB)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
118009920 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
118009920 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
HHH
Cdd1
HHH_2
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
118009920
NCBI-ProteinID:
XP_034859835
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESTKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgcaaggcgccgcaggagacgctcaacgggggaatcaccgacatgctcaca
gaactcgcaaactttgagaagaacgtgaaccaggcaatccacaagtacaatgcttacaga
aaagcagcatctgtgatagcaaagtacccacacaaaataaagagtggagcagaagctaag
aaattgcctggagtaggaacaaaaattgctgaaaagattgatgaatttttagcgactgga
aaattgcgtaagctggaaaagattcggcaggatgacacgagttcatctatcaattttctg
actcgagttagtggcattggtccatctgctgcaaggaagtttgtagatgaaggaattaaa
acattagaagatctcagaaaaaatgaagataagttgaaccatcatcagcgaattgggttg
aaatattttgaggactttgagaaaagaattcctcgtgaagagatgttacaaatgcaagat
attgtactaaatgaagttaaaaaagtggattctgagtacattgctacagtctgtggcagt
ttcagaagaggtgcagagtccagtggtgacatggatgttcttctgacccatccaagcttt
acctctgaatcaaccaaacagccaaaactgttacatcgtgttgtggagcagttacagaag
gtccattttattacagatactctgtcaaaaggtgaaacaaagttcatgggtgtttgccag
cttccaagtaaaaatgatgaaaaggagtatccacacaggagaattgatataaggttgata
cccaaggatcagtattactgtggtgttctctatttcactgggagtgatattttcaataag
aatatgagagctcatgccctagaaaagggcttcacaatcaatgagtacacaatccgtccc
ttgggagtcactggagtcgctggagaacctctgccggtggatagtgagaaagacatcttt
gactacatccagtggaaataccgagaacccaaggatcggagtgaataa
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