KEGG   Mirounga leonina (Southern elephant seal): 118010027
Entry
118010027         CDS       T07472                                 
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II isoform X1
  KO
K06558  macrophage scavenger receptor 1
Organism
mlx  Mirounga leonina (Southern elephant seal)
Pathway
mlx04145  Phagosome
Brite
KEGG Orthology (KO) [BR:mlx00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118010027 (MSR1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mlx04131]
    118010027 (MSR1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:mlx04090]
    118010027 (MSR1)
Membrane trafficking [BR:mlx04131]
 Endocytosis
  Phagocytosis
   Scavenger receptors
    118010027 (MSR1)
CD molecules [BR:mlx04090]
 Proteins
  118010027 (MSR1)
SSDB
Motif
Pfam: SRCR Macscav_rec Collagen SRCR_2 THOC7
Other DBs
NCBI-GeneID: 118010027
NCBI-ProteinID: XP_034860029
LinkDB
Position
Unknown
AA seq 487 aa
MDQMLKYYVIKILGLNCKEREVDKSVLLSLGQTMERWNSFLDQQDDTDNCSESVKFDARS
MTALLPLYPKNGPTLQEKLKSLKAALIVLYLLVFVVLIPIIGIMAAQLLKREMKNCTVGP
INANEISQSLTGKGNDSEDEMRFREAVTEQMSNMEKRIQYISDTEANLIDSLHFQNFSLV
TDQRFNDVLLQLSTLVSSVQGHGNVIDEISKSLISLNTTLLDLQLSIETLNGKVQDNTLK
QQEGMSRFEEFVYKASAEITSVKEKQVNLEQEIKGEVKVLNNITNDLRLKDWEHSQTLKN
ITLIQGPPGPRGEKGDRGPAGERGPQGIPGAVGSPGLKGDQGAVGFSGPRGFPGPPGKTG
RTGNPGPKGQKGDKGSGSILTSLKTVRLIGGRAPHEGRVEIFHNGQWGTVCDDHWELRGG
QVICRSLGYQGVQAVHKGAYFGQGTGPIWLNEVFCFGRESSIEDCKIRQWGVRGCSHSED
AGVTCTS
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggaccagatgctgaaatactatgtgataaagattttaggtctcaactgtaaagagaga
gaagtggataaatcagtgctgctgtctttaggacaaacgatggaacggtggaatagcttt
ctcgatcaacaggatgacactgataactgctcagaatccgtgaagtttgatgcccgctcc
atgacagccttgctccctctgtatcctaaaaatggcccaacccttcaagagaaactgaag
tccctcaaagctgcactgattgtcctttatcttcttgtgtttgtagttctcatacccatc
atcggaataatggcagcacagcttctgaagagggaaatgaagaattgcacagttggtcca
attaatgcaaatgaaatatctcaaagtctcacaggaaaaggaaatgacagtgaagatgag
atgagatttcgagaagctgttacggaacaaatgagcaacatggagaagagaatccaatat
atttcagatacagaagccaatctcatagattcattgcatttccaaaattttagtctggtg
actgatcaaagatttaatgatgttcttctccagttgagtaccttggtttcctcagttcag
ggacacggaaacgtgatagatgaaatctccaagtcgttaataagtctgaataccacattg
cttgatttgcagctcagtatcgaaacactgaatggcaaagtccaagacaatacattaaaa
cagcaagagggcatgagtagattcgaagagtttgtgtacaaggcatcagcagaaattacg
tctgtgaaagaaaaacaagtgaatctggaacaggaaataaaaggagaagtgaaagtactg
aataacatcactaatgatctcagactgaaagactgggaacactctcagacattgaaaaat
atcactttaattcaaggtcctcctggaccccgcggtgaaaaaggagatagaggtcccgct
ggagaacgtggtccacaaggcattccaggtgcagtaggttctccaggtcttaaaggtgat
cagggagcagttggcttttctggacctcgaggattcccagggccaccggggaagaccggg
aggacaggaaatcctggaccaaaaggccagaagggggacaaagggagtggaagcatacta
acttcacttaagacagtacgactgattggtggtagagctcctcatgagggcagagtggag
attttccacaatggtcagtggggcacagtttgtgatgaccactgggaactgcgaggtgga
caggtcatctgtaggagtctgggataccaaggtgttcaagctgtgcataaaggagcttac
tttggacaaggtactggtccaatttggctgaatgaagtattttgttttgggagagaatca
tctatcgaagactgtaaaattagacaatggggtgtgagaggctgctcacactctgaagat
gctggagtcacttgtacttcataa

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