Mirounga leonina (Southern elephant seal): 118010027
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Entry
118010027 CDS
T07472
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II isoform X1
KO
K06558
macrophage scavenger receptor 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118010027 (MSR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlx04131
]
118010027 (MSR1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mlx04090
]
118010027 (MSR1)
Membrane trafficking [BR:
mlx04131
]
Endocytosis
Phagocytosis
Scavenger receptors
118010027 (MSR1)
CD molecules [BR:
mlx04090
]
Proteins
118010027 (MSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRCR
Macscav_rec
Collagen
SRCR_2
THOC7
Motif
Other DBs
NCBI-GeneID:
118010027
NCBI-ProteinID:
XP_034860029
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MDQMLKYYVIKILGLNCKEREVDKSVLLSLGQTMERWNSFLDQQDDTDNCSESVKFDARS
MTALLPLYPKNGPTLQEKLKSLKAALIVLYLLVFVVLIPIIGIMAAQLLKREMKNCTVGP
INANEISQSLTGKGNDSEDEMRFREAVTEQMSNMEKRIQYISDTEANLIDSLHFQNFSLV
TDQRFNDVLLQLSTLVSSVQGHGNVIDEISKSLISLNTTLLDLQLSIETLNGKVQDNTLK
QQEGMSRFEEFVYKASAEITSVKEKQVNLEQEIKGEVKVLNNITNDLRLKDWEHSQTLKN
ITLIQGPPGPRGEKGDRGPAGERGPQGIPGAVGSPGLKGDQGAVGFSGPRGFPGPPGKTG
RTGNPGPKGQKGDKGSGSILTSLKTVRLIGGRAPHEGRVEIFHNGQWGTVCDDHWELRGG
QVICRSLGYQGVQAVHKGAYFGQGTGPIWLNEVFCFGRESSIEDCKIRQWGVRGCSHSED
AGVTCTS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaccagatgctgaaatactatgtgataaagattttaggtctcaactgtaaagagaga
gaagtggataaatcagtgctgctgtctttaggacaaacgatggaacggtggaatagcttt
ctcgatcaacaggatgacactgataactgctcagaatccgtgaagtttgatgcccgctcc
atgacagccttgctccctctgtatcctaaaaatggcccaacccttcaagagaaactgaag
tccctcaaagctgcactgattgtcctttatcttcttgtgtttgtagttctcatacccatc
atcggaataatggcagcacagcttctgaagagggaaatgaagaattgcacagttggtcca
attaatgcaaatgaaatatctcaaagtctcacaggaaaaggaaatgacagtgaagatgag
atgagatttcgagaagctgttacggaacaaatgagcaacatggagaagagaatccaatat
atttcagatacagaagccaatctcatagattcattgcatttccaaaattttagtctggtg
actgatcaaagatttaatgatgttcttctccagttgagtaccttggtttcctcagttcag
ggacacggaaacgtgatagatgaaatctccaagtcgttaataagtctgaataccacattg
cttgatttgcagctcagtatcgaaacactgaatggcaaagtccaagacaatacattaaaa
cagcaagagggcatgagtagattcgaagagtttgtgtacaaggcatcagcagaaattacg
tctgtgaaagaaaaacaagtgaatctggaacaggaaataaaaggagaagtgaaagtactg
aataacatcactaatgatctcagactgaaagactgggaacactctcagacattgaaaaat
atcactttaattcaaggtcctcctggaccccgcggtgaaaaaggagatagaggtcccgct
ggagaacgtggtccacaaggcattccaggtgcagtaggttctccaggtcttaaaggtgat
cagggagcagttggcttttctggacctcgaggattcccagggccaccggggaagaccggg
aggacaggaaatcctggaccaaaaggccagaagggggacaaagggagtggaagcatacta
acttcacttaagacagtacgactgattggtggtagagctcctcatgagggcagagtggag
attttccacaatggtcagtggggcacagtttgtgatgaccactgggaactgcgaggtgga
caggtcatctgtaggagtctgggataccaaggtgttcaagctgtgcataaaggagcttac
tttggacaaggtactggtccaatttggctgaatgaagtattttgttttgggagagaatca
tctatcgaagactgtaaaattagacaatggggtgtgagaggctgctcacactctgaagat
gctggagtcacttgtacttcataa
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integrated database retrieval system