Mirounga leonina (Southern elephant seal): 118010082
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Entry
118010082 CDS
T07472
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04613
Neutrophil extracellular trap formation
mlx05014
Amyotrophic lateral sclerosis
mlx05034
Alcoholism
mlx05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
118010082 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
118010082 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118010082 (HDAC6)
09165 Substance dependence
05034 Alcoholism
118010082 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mlx01009
]
118010082 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118010082 (HDAC6)
04131 Membrane trafficking [BR:
mlx04131
]
118010082 (HDAC6)
03036 Chromosome and associated proteins [BR:
mlx03036
]
118010082 (HDAC6)
Enzymes [BR:
mlx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
118010082 (HDAC6)
Protein phosphatases and associated proteins [BR:
mlx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118010082 (HDAC6)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118010082 (HDAC6)
Membrane trafficking [BR:
mlx04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
118010082 (HDAC6)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
118010082 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
118010082
NCBI-ProteinID:
XP_034860170
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRHNPHSPPHDSSVTSKRGVKKGALLHSSPSLAELKKKGRMKKLS
QAAEQDLVVGLKELDVNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNS
YTCACLASGSVLSLVDAVLGNEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQK
KHAIQRVLIVDWDVHHGHGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGRG
QGYTMNVPWNQVGMRDADYIAAFLYLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAKGVSASLHTLLGDPCPTLESPGAPCPSA
QASLSCALEALEPFWEVLVRSAETLEEDFLEEENVEKEEEGPWQPPALPIPMWPVLQART
GLVYDQRMMGHYNLWDKYPPEMPQRVFRIMRRLEELGLAGRCLTLPARPATDAELLTCHS
AEYVGRLRATAKMKTRELHREGSSFDSIYICPDTFACAQLATGAACRLVEAVLAGEVLNG
TAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAVSGHALRILIVDWDVHHGNGTQHIFE
QDPSVLYISLHRYDHGTFFPMGDEGASSQIGRATGTGFTVNVAWNGPRVGDADYLAAWHR
LVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGG
YNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSLRAMKVED
KEGPSSSKSIPKKLTQPANRGSAVGMTAPDGNILDADAGKATSASSMEVATPDQAKSETA
VVELSQDQTSEAPPGEATADQTPSEAATGGATLDQTIVESATVGATPGQTTSEEAVGGAA
VIQTPPALCTDNQTPPASPAQGATAQIAPSKLTENLRTLDLNSEAQEAPESQMAEEEGLL
GEAARGQDRDDSVLIQSFGDHANADQVMFYAVTPLPWCPHLVAVRPIPESGLDVTQPCQD
CGTLQENWVCLSCYQVHCGRYVSAHMLQHHEVSGHPLVLSYVDLSTWCYNCEAYVHHQAL
LDVKNIAHQNKFGENMPHSH
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggattccaccacaaccaggcagcgaaggagtaggcataacccc
cattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggtgcctta
ctccactccagccctagtttagcagagctaaagaagaaaggcagaatgaagaagctcagc
caagcagcagagcaagacctagtcgtgggcctgaaagagctggatgtgaaccttgaggcc
aagacactgtctggcactggcttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgagcggctccatgccatcaaggaacagctgatc
caggagggccttctggaccgctgcgtgtccttccaggctcggtttgctgaaaaggaggag
ctgatgttggttcacagcctagaatacattgatctgatggaaacgacccagtacatgaat
gaaggagagctccgcatcctagcagacacctatgactcagtttacctgcatccgaactca
tatacctgtgcctgcctggcctcgggctctgtcctcagcctggtggatgcggtcctgggg
aacgagatccggaatggcatggccatcatcaggcctcctggacaccatgcccagcacagt
cttatggatggatattgcatgttcaaccacgtggccgtggctgcccgctacgctcaaaag
aagcatgccattcagagggtgctcatcgtggactgggatgtgcaccatggtcacggtaca
cagtttacctttgaccaggaccccagcgtcctctatttctccatccaccgctatgagcag
ggccggttctggccccacctgaaggcctctaactggtccaccataggttttggccgaggc
cagggatataccatgaatgtgccttggaaccaggtggggatgcgagacgccgactacatt
gccgccttcctgtacctccttctgccagtcgcccttgagttccagccccagctggtcctg
gtggccgctggatttgatgccctccaaggggaccccaagggtgagatggccgccactccg
gcagggttcgctcagctaacccacctgctcatgggtctggcaggaggcaaactgatcctg
tctctggagggtggctacaacctccgctccctggccaagggcgtcagcgcctccctccac
acccttctgggagacccttgccccacgctggagtctcctggtgccccctgcccaagtgcc
caggcgtcactctcctgcgctctggaagccctggagcccttctgggaggtccttgtaaga
tcagctgagaccctggaggaggacttcctggaggaggagaacgtggagaaggaagaagag
ggaccgtggcagcccccggcgctcccaatcccgatgtggccggtgctacaggctcgaaca
gggctggtctatgaccagcgaatgatgggtcactacaacttgtgggacaagtacccccca
gagatgccccagcgagtctttcggatcatgcgccgtttggaagaactgggccttgcgggc
cgctgcctcacgttgcccgcacgccccgccacggatgccgaactgctcacctgccacagt
gctgagtacgtgggtcgtctgcgggccacagcgaagatgaaaacccgggagctgcaccgc
gagggctccagcttcgactccatctacatctgccccgacaccttcgcctgcgcacagctg
gccactggcgccgcctgccgcctggtggaagccgtgctggccggcgaggttttgaatggc
actgctgtggtgcgtcccccaggacaccatgcagagcgggatgccgcgtgtggtttttgc
tttttcaactctgtggctgtggctgctcgccatgcccaagccgtcagtgggcatgcgctg
cggatcctcatagtggactgggacgtccatcatggtaatggaactcaacacatatttgag
caagaccccagcgtgctgtacatttccctgcaccgatatgatcacggcaccttctttccc
atgggggatgagggcgccagcagccagataggccgggccacgggcaccggcttcaccgtc
aacgtggcctggaacgggccccgcgtgggcgacgccgactacctggctgcctggcatcgt
ctggtgctccctattgcctacgagtttaacccagaactggtgctggtctcggctggcttt
gatgctgcacggggggacccgctggggggctgccaggtgtcacccgagggctatgcacac
ctcacccacctgctgatgggccttgccaatggccgtatcatcctgatcctagagggtggc
tacaacctgacatccatctcggagtccatggctgcctgcacccgttccctccttggggac
ccaccaccactgctaaccctgtcgcggcccccgctgtcaggggccctggcctccatcacc
gagaccatccaagtccatcgcagatactggcgcagcttgcgggccatgaaggtcgaagac
aaggagggaccctccagttctaagtcgatccccaagaagctgacccagccagccaaccgt
gggtcagctgtggggatgaccgcaccagatgggaacattctggatgcggacgcagggaag
gctacctcagcatcatccatggaagtggccactccagaccaagctaagtcagagactgcc
gtggtggagctcagtcaggaccaaacctcggaggctccccctggggaagccacggcggac
cagacaccctcagaggcagccacaggaggggccacgctggaccagaccatcgtggagtct
gccacagttggagccacgccgggccagaccacctcagaggaagccgtggggggagctgcg
gtgatccaaacccctccagccttatgtactgacaaccagactcctccagcctcacctgcg
caaggagccacggcccagatagcccccagtaagctgactgagaatctcaggaccttggac
ctaaacagcgaggctcaggaggcaccagaatctcagatggcagaagaggaggggctgcta
ggagaggcagctagaggtcaggacagggatgattccgtgctgattcagagctttggggac
catgccaacgctgaccaggtcatgttttatgccgtgacaccgctgccctggtgtccccat
ctggtggcagtacgtcccatacctgaatcgggcctggacgtgacccaaccttgtcaggac
tgtggaacactccaggagaactgggtgtgtctatcttgctatcaggtccactgtggccgt
tacgtcagtgcccatatgctccaacaccacgaagtctcaggacacccgctggtcctcagc
tacgtcgacctgtctacctggtgttacaactgtgaggcctatgtccaccaccaggctctc
ctggatgtgaagaacatcgctcaccagaacaagttcggggaaaacatgccccactcacac
taa
DBGET
integrated database retrieval system
