Mirounga leonina (Southern elephant seal): 118010607
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Entry
118010607 CDS
T07472
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03030
DNA replication
mlx03410
Base excision repair
mlx03420
Nucleotide excision repair
mlx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118010607 (RFC1)
03410 Base excision repair
118010607 (RFC1)
03420 Nucleotide excision repair
118010607 (RFC1)
03430 Mismatch repair
118010607 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlx03032
]
118010607 (RFC1)
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118010607 (RFC1)
DNA replication proteins [BR:
mlx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118010607 (RFC1)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118010607 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
BRCT_2
Rad17
RuvB_N
AAA_17
AAA_5
AAA_30
AAA_14
AAA_33
AAA_18
AAA_16
SKI
AAA_19
nSTAND3
Zeta_toxin
AAA_7
RNA_helicase
NTPase_1
NPHP3_N
TIP49
AAA_28
Motif
Other DBs
NCBI-GeneID:
118010607
NCBI-ProteinID:
XP_034861011
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MKNHLVILKVKLRCETFISSRSNKDIRKFFGVIPSGKKPVSEAVKKNEKTKSAEETLKAK
KGIKEIKVNSSCKEDDSKQKQPNKKKRIIYDSDSESEETVQVKNAKKQPEKLPLSSKPGK
ILRQDPVTYISETDEEDDFMCKKAASKSKENGGSANSYLGAANMKKIEENTKTKNKPLSP
IKLTPTSVLDYFGTGSVQRSDKKMVASKRKEPSQNADDSRLNDEVIAKQLQLDEDAELER
QLHEDEEFARTLAMLDEEPKTKKVRKDPREREAFSSVQGNLSKAEKHKSPHKVKTEQFSD
DRKNCSPKKQTKIGSQQHLKSSPHKIEETSPKTSSKVALLKKKGESSYKETEPVSSKRKE
NAVELKGQTKTPKKPKSSPAKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKG
AENCLEGLTFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKA
AALGTNIIDEDGLLNLIRTMPGKKSKYEIAVEAEMKKEKSKLERTPQKKDQGKRKISPTK
KESESKKSRLTPKKDSSIKSVKKETSVFWRCLDFEEQVAEETNGDSRARNLADDSSESKV
ENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLQNWHKSPSEDKKHAAKFGKFAGKDDG
SSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEVVAESLNNTSITG
FYSTSQHRSGGAAHSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDR
NHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKVPPPAMNEIILGANQDIRQVL
HNLSMWCARSKALTYDQAKADSHRAKKDIRLGPFDVARKVFAAGEETAHMSLVDKSDLFF
HDYSIAPLFVQENYIHVKPVAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLP
AQAIYASVLPGELMRGYMTQFPTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVN
MDYLSHVRDALVQPLTSQGVEGVQDVIALMDTYYLMKEDFENIMEISSWGGKSSPFSKLD
PKVKAAFTRTYNKEVHLTPYSLQAVKTPRHSTGPALDSEYNEELNEDDSQSDEKDQDSME
TDAMIKKKTKSSKPSKSEKDKESRKGKGKSSKK
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatcatttggtaattttaaaagtgaaactccgatgtgaaaccttcatttcctcc
agaagcaataaagatattcggaaattctttggggttataccaagtggaaagaaacctgta
agtgaagcagtaaagaagaatgagaaaacaaagtccgctgaagaaaccttaaaagcaaag
aaaggaataaaggaaatcaaggtaaatagttcttgtaaagaagatgactctaaacagaag
caaccaaacaagaaaaagaggatcatctatgattcagattcagaatccgaggagacagtg
caggtaaaaaatgccaaaaagcaaccagagaaattgccattgtcttctaaacctggtaaa
attctacgccaggatcctgttacatacatttcagaaacagatgaagaagatgacttcatg
tgtaagaaggcagcctctaaatcaaaagagaatggaggatctgcaaatagttatcttgga
gcagcaaacatgaaaaagattgaagaaaacactaagaccaagaataaacctttatcacca
ataaaacttacccccacgtcagtgcttgattattttggaactggaagtgtccaaagatca
gataagaagatggtagcaagcaaaagaaaagagccttcacaaaatgcagatgattccaga
ttaaatgatgaagtcatcgccaagcagttgcaacttgatgaggatgcagagctggagaga
caactacatgaagatgaagagtttgccagaacgttagccatgttggatgaagaacccaag
accaaaaaggttcggaaggacccaagagagagagaagcgttttcatctgtccaaggcaat
ttaagtaaagcagaaaaacataaatctcctcataaagtaaaaacagaacaattttcagat
gacagaaagaactgcagtcccaagaagcaaactaaaataggatctcagcaacatttgaag
tcatcccctcacaaaatagaagaaacttctccaaaaaccagttccaaggtagcccttttg
aaaaaaaagggagagagttcttataaagaaacagagcctgtgtcttcaaaaagaaaagaa
aatgctgttgaattaaaaggacagacaaaaactcctaagaaacccaaaagttctccagct
aaaaaagagtctgtaagtcctgaagattctgagaagagacgcactaattatcaagcttat
cgaagctacttaaatagagaaggccccaaagctctgggctccaaagaaataccaaaggga
gctgaaaattgcttggagggccttacatttgtaatcacaggagtgctggagtccattgaa
cgagatgaggccaagtctctaattgagcgttacgggggcaaagtaacaggaaatgtcagc
aagaaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgataaggca
gcagccttggggacaaatattattgatgaagatggcctattgaatctgattcgaactatg
ccaggcaagaagtctaagtatgaaatagcagttgaagctgagatgaagaaagagaagtcc
aaattggaaagaacacctcaaaaaaaagaccaaggaaaaagaaaaattagcccaactaaa
aaagagtcagaatctaaaaaaagcagactgactcccaaaaaggacagctccataaagtca
gtaaaaaaggaaaccagtgtgttttggagatgcctggacttcgaggagcaggtggctgag
gagacaaacggtgacagccgggctaggaatttggctgatgacagcagtgaaagcaaagtg
gaaaatttgctctgggtggataaatataagccaacctcgctcaagaccataattggacag
caaggtgaccagagctgtgcaaacaaactcctccgctggctccagaactggcacaagagt
ccatccgaagataagaaacacgcagcgaagtttggtaagtttgctggcaaagatgatggc
tctagttttaaagcagcgctgctctcgggccctccaggtgttggcaagacaaccacagcc
tctctggtttgtcaggaattgggatatagctacgtggaactgaatgcaagtgacactcgg
agtaagaacagtttgaaggaggttgttgctgaatcactgaataataccagcatcacaggc
ttttattcaacttctcagcatcggtcaggcggagcagcccattcagtaagcacgaaacat
gctctcatcatggatgaagtagatggcatggcaggcaatgaggacaggggaggaattcag
gaattaattggtctgataaaacatacaaaaattcccattatttgtatgtgcaatgataga
aatcatcccaagattcgttctttggttcattattgttttgatcttcgttttcaaagacct
cgagttgaacagattaagggtgctatgatgtctattgcatttaaagagggtttgaaggtc
ccccctccagctatgaatgaaataattttgggagccaatcaagatatcagacaggtttta
cacaatctgagtatgtggtgtgcacgaagtaaggcactaacctatgaccaggccaaggct
gattctcatagagccaagaaggatatcagactgggcccatttgatgttgcccggaaggtg
tttgcagctggagaggagactgctcatatgtcacttgtggacaagtccgatctgttcttt
catgattactcaatagcacccctctttgtccaggagaactacatacacgtgaagcctgta
gctgcagggggtgacatgaaaaagcacctgatgcttttaagcagagcagcagatagcata
tgcgatggtgacctagtggaccgtcagatccggagtaagcaaaactggagtcttctgccc
gcacaggccatttatgccagtgttcttcctggagagttaatgagggggtacatgactcag
tttcctaccttcccaagctggttggggaagcactcatctaccggcaaacatgatcgtatt
gtacaggacctagcactgcacatgagtcttagaacttattccagcaaaaggactgtaaac
atggattatctgtcccatgtaagggatgcacttgtacagcccttgacctcacaaggggta
gaaggagtacaggacgttattgctcttatggacacctactacttgatgaaagaagacttt
gagaatatcatggaaattagcagctggggaggcaaatctagtcccttctccaagctggac
cccaaggtgaaagcagccttcacaagaacttacaataaggaagtccaccttactccatat
tcacttcaggcagtaaagacacctagacacagcacaggcccagcactggattctgaatac
aatgaagagttaaatgaagatgactctcaatctgatgagaaagaccaagactctatggaa
actgatgcaatgatcaagaaaaagacaaaatcttcaaagccttcaaaatcagaaaaagat
aaggagtccagaaaaggaaaaggaaaaagttcaaagaaatga
DBGET
integrated database retrieval system
