Mirounga leonina (Southern elephant seal): 118010633
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Entry
118010633 CDS
T07472
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118010633 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mlx01009
]
118010633 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mlx04515
]
118010633 (PCDH7)
Protein phosphatases and associated proteins [BR:
mlx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118010633 (PCDH7)
Cell adhesion molecules [BR:
mlx04515
]
Cadherins
Protocadherins
118010633 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
Cadherin_pro
LYRIC
KIAA1549
MLANA
EphA2_TM
Adeno_E3_CR2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
118010633
NCBI-ProteinID:
XP_034861055
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MLRMRTAGWARGWCLGCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGGGGEGRRAGPADSAPYPGGGGNGGSRRRPDAPEGGGGTNAGGRSGVF
ELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDN
SPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETS
GWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRKIGRIP
LKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGDQNKKK
YFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLVVKVGDTNDNPPVFGQSVVEVYF
PENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPDSGDILVNTVLDREQTDR
YEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVM
DADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSA
TATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLARDSDEGINADLNYSIV
GGNPFKLFEIDSTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVS
NATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYC
RSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKPNGQRY
DSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDL
PPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQDTVIALGYLDNPGKSPYFKPFRRVTF
SVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEA
EHMENDSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGS
QEKLANGEAAIMGDRNRNLLNKKLTSSYETFSAASFSKNEEANPEDIPLTKTGEYKPSPV
NTLTRREVYL
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccgcgggatgggcgcggggctggtgcctgggctgctgtctcctc
ctgccgctctcgctcagcctggcggccgccaagcagctgctccgataccggctggccgag
gagggcccagcggacgtccgcatcggcaacgtcgcctcggacttgggcatcgtgaccggc
tcgggtgaggtgactttcagcctcgagtcgggctcggagtacctgaagatcgacaacctc
accggcgagctgagcacgagcgagcggcgcatcgaccgcgagaagctgccccagtgtcag
atgatcttcgacgagaacgagtgctttctggacttcgaagtgtcggtgatcgggccctcg
cagagctgggtggacctgttcgagggccgggtcatcgtactcgatatcaacgacaacacg
cccaccttcccgtcacccgtgctcacgctcacggtggaggagaacaggccggtgggcacg
ctctacctgctacccaccgccactgaccgcgacttcggccgcaacggcatcgagcgctac
gagctgctccaggagcccgggggcgggggcggcggcggcggcggcggcgagggccggcgt
gctgggcccgccgacagcgccccctaccccgggggcggcgggaacggcggctcgaggagg
cggccggacgccccagagggcggcggcggcaccaacgccggtggccgcagcggcgtgttc
gaactgcaggtggccgacaccccggatggcgagaagcagccacagctgatcgtgaagggg
gcgctggatcgggaacaacgcgactcctacgagctgaccctgcgggtgcgcgacggtggc
gacccgcctcgctcctcgcaggccatcctgagggtgctcatcaccgacgtgaacgacaac
agtccccgtttcgagaagagcgtgtacgaagctgacctggccgagaatagcgccccaggg
actcccatcctgcagctgcgtgccgccgacctggacgtgggggtcaacggacagatcgag
tatgtgttcggagcggctaccgaatccgtgcggcggctgctgcgcctggacgagacgtcc
ggctggctcagtgtcctgcaccgtatcgaccgcgaggaggtgaaccagctgcgcttcacc
gtcatggcccgcgaccgcgggcagccccccaagaccgacaaggccacggtggtcctcaac
atcaaggacgagaacgataacgttccgtccattgaaatccgcaagatcgggcgtatccca
ctcaaggatggggtggccaacgtggccgaggatgttctggtggacacccccattgctctg
gtacaggtgtccgaccgagaccaaggcgagaatggggtagtcacctgcaccgtggtgggt
gacgtgcccttccagctcaagccggccagcgacacagagggcgaccagaacaagaaaaag
tactttctgcacacctcggcccctttggactatgagaccacccgggaattcaacgtggtc
attgtggcggtggactcgggcagccccagcctctccagcaacaactccctggttgtcaag
gtaggagacaccaatgacaacccgccggtcttcggccagtccgtggtggaggtttacttt
ccagagaacaacatccctggggagagggtggccacggtgctggcgacagacgcggacagt
gggaaaaatgcagagattgcctactctctggattcctccgtgatggggatctttgccatc
gatcctgattctggggacatccttgtcaatacggtgctggaccgagagcagacagacagg
tatgagtttaaagttaatgccaaagacaaaggcatcccggtgctgcagggcagcaccacg
gtgattgtgcaggtggctgacaagaatgacaatgaccctaagtttatgcaggacgtcttt
accttttatgtgaaagaaaacttgcagcccaacagcccggtggggatggtcacggtgatg
gatgcagacaaggggcgcaatgcggagatgagcctctacatagaggaaaacagtaacatt
ttttccattgaaaacgacacagggaccatttactccacaatgtcttttgaccgggaacat
cagaccacatacaccttcagagtcaaggctgtggatgggggggatcctcccagatcagcc
acagccacagtctctctctttgtgatggatgagaatgacaatgctcccacagttaccctt
cccagaaacatttcctacactttactgccaccttcaagtaatgtcaggacagtagtagct
acagtgttggcaagggacagtgatgagggcatcaatgcagaccttaactacagcattgtg
ggagggaatcccttcaagctgtttgagattgattccaccagtggtgtggtttccttagtg
ggaaaactcacccaaaagcattatggcttgcacaggttggtggtgcaagtgaatgacagt
ggacagccttcccagtccaccacgactctggtgcatgtgtttgtcaatgaaagtgtttcc
aatgcaactgtgattgactcccagatagccagaagtttgcacaccccactcacccaggac
atagctggtgacccaagttatgaaattagcaaacagagactcagtattgtcattggggtg
gttgctggaattatgacagtgattctcatcatcttaattgtagtgatggcaaggtactgc
cggtccaaaaataaaaatggctatgaagctggcaaaaaagatcatgaagacttttttaca
ccccagcagcacgacaaatctaaaaagcctaaaaaggacaagaaaaacaaaaagtctaag
cagcctctctacagcagcattgtcactgtagaagcttctaagccaaatggacagaggtat
gatagcgtcaatgagaagctgtcagacagcccaagcatggggcgataccgatcagttaat
ggggggcccggcagtcctgacctggccaggcattacaaatctagttctccgttgcctact
gtccagcttcacccccagtcaccaactgcaggaaaaaaacaccaggccgtacaagatcta
ccaccagccaacacatttgtgggagcaggagacaacatttcaattggatcagatcactgc
tctgaatacagctgtcaaaccaataacaagtacagcaaacaggacactgtgattgcattg
ggctacttggataatccaggaaaatctccttattttaagccgtttcgtagagtgacgttt
tctgttgtgagtcagcctcaggacccacatcaggggtcactgcagagttgctatgacagc
gggctggaggagtcagagacaccaagcagtaagagttcatcagggccaaggctgggtgcc
cttccactcccagaggacaactatgaaaggaccacgccggatggcagtgttggtgaggca
gagcatatggaaaatgattcaagacctcttccagatgtagccctgactgggaagtgtacc
cgtgagtgtgatgaatatggccactcagactcctgctggatgccggtccgcacttctcca
gagaggaagaagagccagcccaaactctccactttcatgcctgttgatgaacgaggaagc
caggaaaagctggccaatggtgaggccgccatcatgggtgaccgcaacagaaacctcctg
aacaaaaagttgacctcgtcctatgagaccttcagtgcagctagtttcagcaaaaatgag
gaagccaaccctgaggatattccccttacaaaaacaggggaatacaagccatctcctgtc
aatactctcactagaagagaagtttacctgtag
DBGET
integrated database retrieval system
