Mirounga leonina (Southern elephant seal): 118011311
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Entry
118011311 CDS
T07472
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04140
Autophagy - animal
mlx04148
Efferocytosis
mlx05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118011311 (VPS16)
04148 Efferocytosis
118011311 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118011311 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlx04131
]
118011311 (VPS16)
Membrane trafficking [BR:
mlx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118011311 (VPS16)
Hops complex
118011311 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
118011311
NCBI-ProteinID:
XP_034861895
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MDCYTADWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
SIRPVLEIYSASGLPLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSCSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHRPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQMAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGHFVDLSLHDTVTTLVLGGHSKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAELTLVLSHCTGTADAATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcggattggaacccgctcggggattctgctttttaccggaagtat
gagctgtacagcatggactgggacctgaaggaggaactcagggactgcctggtagccgct
gcgccctatgggggccccattgcactgttgaggaacccgtggcggaaggagaaggcggcc
agcatacggccagtgcttgagatctactctgcctctggcctgcctctggccagtctactg
tggaagagtgggcccgtggtgtccctaggctggtcagctgaggaggagctgctctgcgtg
caggaagatggtgtagtgctggtctatgggcttcatggcgacttccggagacacttcagc
atgggcaatgaggtgctccagaaccgggtcctagacgcccggatcttccatactgagttt
ggttcgggggtggccatcctcactggggcccaccgctttacgctcagcgccaatgtgggt
gatctcaaacttcgccggatgccggaggtgccgggtctgcagagtgcaccctcgtgttgg
accacactgtgccaggaccgagttgcacacattcttctggccgtggggcctgatctttac
ctccttgaccatgcagcctgctcggcagtgacgccccctggcctggcccccggagtgagc
agtttcctgcagatggcagtctccttcacctaccgccatctggcactcttcacagacaca
ggctacatctggatggggacggcatcactcaaggagaagctgtgtgagttcaactgcaac
atccgggccccccccaagcagatggtctggtgcagccgtcctcggagcaaagagagggct
gtcgtggtggcctgggagaggcggctaatggtggtgggtgacgcacctgagagcatccag
tttgtgctggatgaagattcctacctggtgcctgagctggatggggtccgcatcttctct
tgtagcacccacgagttcctgcatgaggttccagtggccagcgaggagatcttcaaaatt
gcctcgatggcccctggagcactgttgttggaggcccagaaagagtacgagaaagagagc
cagaaggcagatgagtacctacgggagatccaggagctggggcagctgacccaggccgtg
cagcagtgcatcgaggctgcgggacatgagcatcggccagacatgcagaagagtctgctc
agggcggcctcctttggaaagtgtttcctcgacagatttccacctgacagcttcgtgcgc
atgtgtcaggacctgcgtgtgctgaatgccattcgggactaccacattgggatccccctc
acttatagccaatacaagcagctcaccatccaggtgctgctggacaggctggtgttgagg
aggctttaccccctggcgatccagatctgtgagtacctgcgccttcctgaagtgcagggc
gtcagcaggatcctggcccactgggcctgctacaaggtgcaacagaaggatgtgtccgac
gaggatgttgctcgggccattaaccagaagctgggagacacaccaggcgtctcttactcc
gacattgctgcacgggcctatggctgtggccgcacggagctggccatcaagctgctggag
tatgagccacgctctggggagcaggtaccccttctcctaaagatgaagagaagcaaactg
gcactgagcaaggccatcgagagtggagacactgatctggtgttcacggtgttgctgcac
ctgaagaatgagctaaaccgaggagactttttcatgactcttcggaaccagcccatggcc
ctgagtttgtaccgacagttctgtaagcatcaggagctagagacactgaaggacctttac
aatcaggatgacaaccaccaggagctgggcagcttccacatccgagccagctatgctgca
gaggagcgtatcgaggggcgagtcgcggctctgcagatggcagctgacgccttctacaag
gccaagaatgagttcgcagccaaggccacggaggatcaaatgcggctcctgcggctgcag
cggcgcctggaagatgagctggggggccacttcgtggacctgtctctgcacgacacggtc
accaccctcgtcctcggcggccacagcaagcgcgcagagcagctggcacgtgacttccgc
attccggacaagaggctctggtggctgaagctgaccgccctggcggatctggaagactgg
gaggagctagagaagttttctaagagcaagaaatcgcccattggctacctgccctttgtc
gagatctgcatgaaacaacacaacaaatatgaggccaagaagtatgcctcccgcgtgggt
cctgagcagaaggtcaaggccttgcttctcgttggggatgtggctcaggccgcagatgtg
gccattgagcaccggaacgaagcagagctgactcttgtgttgtcccactgcactggaacg
gcagacgcggccacggccgacaagattcagcgggctagggcacaagcccagaagaagtga
DBGET
integrated database retrieval system
