Mirounga leonina (Southern elephant seal): 118011976
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Entry
118011976 CDS
T07472
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04151
PI3K-Akt signaling pathway
mlx04510
Focal adhesion
mlx04512
ECM-receptor interaction
mlx04820
Cytoskeleton in muscle cells
mlx04926
Relaxin signaling pathway
mlx04933
AGE-RAGE signaling pathway in diabetic complications
mlx04974
Protein digestion and absorption
mlx05146
Amoebiasis
mlx05165
Human papillomavirus infection
mlx05200
Pathways in cancer
mlx05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118011976 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118011976 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118011976 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118011976 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
118011976 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
118011976 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118011976 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
118011976 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
118011976 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
118011976 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
118011976 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlx04147
]
118011976 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
mlx00536
]
118011976 (COL4A6)
Exosome [BR:
mlx04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118011976 (COL4A6)
Glycosaminoglycan binding proteins [BR:
mlx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118011976 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118011976
NCBI-ProteinID:
XP_034862865
LinkDB
All DBs
Position
Unknown
AA seq
1706 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKSYGKPCGGQDCSGGCKCFPEKGARGRPGPIGIQGP
TGPQGFAGPSGLAGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGPDGCNGTRGAVGYPGPDGYPGLLGPPGLPGQKGFKGEPVLTQGTFKGMKGEPGLPGLD
GITGPPGAPGSPGAVGPMGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGLPGFPGISGPPGLPGFGTAGEKGEKGIPGLPGPRG
PMGLEGRQGLPGSQGKKGSSGFPGLNGFPGIKGEKGGIGLPGPDVFIDTDGAVISGYPGD
PGMPGLPGLKGDEGIQGLLGPSGIPGLPALPGVPGALGPQGVPGLKGDQGNPGRTTVGTA
GPPGRDGLPGLPGLPGPPGPAFETGTLQNAEPGFPGLRGEQGPRGNPGLKGMKGDSGFCA
CDGGVPNTGPPGEPGLPGPPGLIGLPGLKGTRGDPGSGGAQGPSGTPGLFGPPGPAGPKG
EKGEPTLSSRSGVPGEQGDPGPQGLPGETGVPGKDGIPGLPGLPGLPGDGGQGFPGEKGL
PGLPGEKGHSGPTGPPGIGLPGSPGPRGLPGDQGIDGLPGQQGLPGLPGDCCCRESVGKG
HLVTEGGITLPCIIPGSYGPSGLPGAPGFPGPKGARGLPGTPGQPGLRGNKGEPGSPGLV
HLPELPGFPGPRGEKGLPGFPGFPGKDGLPGELGSPGLPGSKGAPGDIFGAEDGAPGEQG
LRGLPGDRGFPGDSGLPGPKGLLGKSGLLGPKGERGSPGTPGHVGQPGPPGLDGLFGVKG
KPGLPGAPGFPGPSGHPGKKGVRGETGPPSSAGKRGLPGLKGLPGSPGLVGFLGSSGLPG
NTGLPGLPGPKGEKGSVGLAGFPGMPGLPGIPGASGLKGISGSAGRVGPSGRAGSAGEKG
ERGDPGPAGIPSPRPPTLNIRFKGDKGSRGSSGSAGFPGPRGDKGEVGPPGPPGLPGAPG
FPSTIKGLIGRAGLPGSAGRRGLPGLKGSPGITGFPGIPGESGSQGLNGTPGLPGTSGLP
GSKGDQGQTFGISGSPGPKGQPGESGFKGEKGTDGFVGDVGFPGSKGEDGNVGISGDVGL
PGSPGLPGIAGMRGNPGFPGSPGHPGATGPLGPSGLMGTKGFPGLPGLHGLNGLPGTKGT
HGTPGPSITGVPGPAGLPGPKGERGSPGTGLGAPGKPGMKGQKGGRGFPGLQGPAGLPGA
PGLSLPSVIVGQPGDPGRPGLDGERGRPGSPGPPGPPGPSSDQGDPGDPGFPGVPGPQGP
KGDQGIPGFSGLPGELGLKGVRGEPGFMGIPGKVGPPGDPGLPGMKGKAGPRGFSGPRGA
PGQTPIAEAVQVPPGPMGLPGIDGIPGLTGDPGVQGPVGLQGSKGFPGIPGKNGLNGLPG
PPGALGDPGLPGLQGPPGFEGAPGKKGPFGRAGVPGQSVRVGYTLVKHSQSEQVPLCPVG
MSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNVDEVCHYARRNDKSYWL
STTAPIPMMPVGQAQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFRE
EPVSETLKAGRLHTRVSRCQVCMKSL
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgaccgaggaactggcagga
gccggcgagaagaagtcctatggaaagccatgtgggggccaagactgtagtggtggctgt
aaatgctttcctgagaaaggagcgagagggcgaccgggaccaatcggaattcaaggtcca
acaggtccacaaggatttgccggccctagtggtttagcagggttgaaaggagaaagaggc
tccccaggccccctgggaccatatggaccaaaaggagataagggtcccatgggagttcct
ggctttctcggcatcaatgggattccgggccaccccggacagccagggcccaggggccca
cctggcccggatggctgcaatggcactcgaggagctgttggatatccgggccctgatggc
tatcctgggcttctcggaccacccgggcttcctggtcagaaaggctttaaaggtgaacct
gtcctcacccaaggtactttcaaaggaatgaagggggagcctgggctgcctggactggat
ggaataactggcccaccaggagcacccgggtccccaggagctgtaggacccatggggcca
ccaggattgcaaggtcctccaggcccccccggcttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggagatgttggcctcccaggccctgcagga
cccccaccatctaccggggagctggaatttatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcttccgggtttcccaggaataagtggccctccaggtctcccggga
tttggaactgctggagaaaagggagaaaagggaatccctggtttgccaggacctagggga
cccatgggtttagaaggacgccaaggccttccagggagtcagggcaagaaggggtcctca
ggtttccctgggcttaatggatttccaggaattaagggtgaaaagggtggcattggcctg
ccaggcccagatgttttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cccgggatgccaggcctcccaggacttaaaggagatgaaggtatccagggcctgcttggc
ccttctggcatccctggcttaccggctttaccaggtgtcccaggtgccctagggccccaa
ggagttccaggtctgaagggggaccaaggaaacccaggccgcaccacagttgggacagct
ggtccccctggcagagatggtttgccaggcctgcccggcctaccgggcccacccggtcca
gcatttgagactggaaccctacagaatgcagagccaggcttccctggtctccgaggagaa
caaggtccaagaggaaacccaggcctcaaaggaatgaaaggggactcgggcttttgtgcc
tgtgacggtggtgtcccaaacaccggaccacctggggagccaggcctgcccgggccacct
ggcctcataggccttccaggccttaaaggaaccagaggagatccaggctctgggggtgca
cagggcccatcagggactccaggtttatttgggcctcctggtcctgcgggccccaaagga
gagaaaggggaaccgactctcagttcaagatcaggggtgccgggggagcagggtgatcct
ggcccccaggggctccctggggagaccggagtcccaggcaaggatggaataccaggtttg
ccaggtctgccaggcctcccgggtgacggtggacagggcttcccaggtgaaaaggggtta
ccaggacttcctggtgaaaagggccacagtggtccaactggccccccaggaattgggctg
ccgggctctcctggacctcgtgggcttcctggagatcaaggaattgatggattaccaggg
caacaaggcctccctgggcttcccggtgattgctgctgcagggagagcgttggtaaagga
cacttagtcacagagggaggcatcaccttgccgtgtataattcctgggtcctatggtcca
tcaggcttaccaggagctcccggattcccaggccctaaaggggcccgtggcctccctggg
accccgggccagcctggactgcgtggaaataaaggagagcccggaagtccaggattggtt
caccttcctgaattgccaggatttcctggacctcgtggggagaagggcttgcccgggttt
cctgggttccctgggaaagatggcttgcccggggaacttggcagtccaggtttacccggt
tccaaaggagcccctggtgacatctttggtgctgaggatggtgcaccgggggagcaaggc
ctacggggattgccaggggacagaggatttcctggagactctggccttccgggacccaag
ggtttgcttgggaagtcgggcctgctaggccccaaaggtgaacggggcagccccggcaca
ccgggccacgtgggacagccagggccccctgggcttgatggtctcttcggcgtcaagggc
aaacccgggctcccgggtgcaccaggctttccgggcccttcaggacatcctggaaagaaa
ggtgtaagaggcgagacaggtcccccttcatcagctggaaagagaggcctgccggggctg
aaaggccttccaggatctccagggctggttggcttcttggggagctcaggcttgccaggg
aacactgggttgccaggcctgccgggtccgaagggtgagaaggggtctgttgggctggcc
ggtttcccggggatgcctggtctccctggtattcctggcgcaagtggattaaagggcatt
tctgggtcagccggaagagtgggaccatctggacgggccggtagtgcgggtgaaaaagga
gaaagaggcgacccagggccagctggaatacccagcccaagacctcccacactgaacatc
cggttcaaaggagacaaaggctcaagaggctcatctggatccgccggatttcctgggccc
agaggtgacaaaggagaggttggccccccggggccaccaggattgcctggagctcccggc
ttccccagtaccatcaagggactcattgggagagcaggcctccctggctccgcaggacga
cggggcttacctggcctgaaggggtcccctggaatcacgggtttcccaggaataccaggg
gaaagcggttcacagggtctcaatggtactcccggactcccaggaacatctggtctccca
ggttcaaaaggagatcaaggtcagacatttggaatttccggtagcccaggacccaaggga
caacctggggagtctggttttaaaggcgagaaaggaacagatggattcgttggtgatgtg
ggtttcccaggaagcaaaggtgaagatgggaatgttggtatttctggagatgttggcctt
cctggctccccaggactccccgggattgcaggcatgagaggaaatccagggtttccgggt
tctccaggccatccaggggcaactgggcccctgggaccctctggcctaatgggaaccaaa
ggtttccctggacttcctggtttacatggactgaatgggcttccaggaaccaagggaacc
catggaactccgggacctagtataaccggcgtgcctgggccagctggcctgcctggtccc
aaaggggaaagaggttctccaggaactggcctcggtgccccagggaagccaggcatgaaa
ggacaaaaaggtggccgaggtttcccaggtctccagggccctgctggtctgcccggtgcc
cccggcctctccttgccctcagtcatagtgggacagcctggcgaccctgggcgaccaggc
ctagatggagagcgaggccgcccaggctccccggggcccccggggccccctgggccgtcc
tccgatcaaggtgaccctggagaccctggcttccctggagttcctggccctcaagggccc
aagggagaccaaggaattccaggtttctccggcctccctggagagctgggactgaaaggc
gtgagaggtgagcctggcttcatggggattccaggcaaggtcgggccacccggagaccca
ggacttcccgggatgaaggggaaggcagggcccagaggcttttctggaccccgaggtgct
cctggacaaacaccaattgcagaagctgtccaggttcctcctggacccatgggtctaccg
ggcatcgatggcatccctggcctcacgggagaccctggggttcaaggccctgtaggcctc
caaggctccaaaggtttccctggcatccctggcaaaaatggtctcaacggactccccggc
ccgcctggggctctcggtgaccctggtctccccggactgcaaggccctccaggatttgaa
ggtgctccagggaagaagggtcccttcgggagggctggagtgcctgggcagagcgtgaga
gtggggtacaccttggtgaagcacagccagtcggaacaggtgcccctgtgccccgtcggg
atgagccagctgtgggtgggttacagcttgctgttcgtggaggggcaggagaaagcccac
aaccaggacctgggctttgctggctcctgcctgccccgcttcagcaccatgcccttcatc
tactgcaacgtcgacgaagtgtgccactatgccaggcgcaacgataaatcctactggctc
tccaccactgcccccatccccatgatgcccgtcggccaggcccagatcccccagtacatc
agccgctgttccgtgtgcgaggcgccctcgcaggccatcgccgtgcacagccaggacatc
accatccctcagtgccccctgggctggcgcagcctctggatcgggtactccttcctcatg
cacacggcggcgggcgccgagggcggcggccagtccctggtctccccgggctcctgcctg
gaggatttccgagccactcccttcatcgagtgcagtggggcccgcggcacctgccactac
tttgccaacaagtacagtttctggctgacgacggtggaagagaggcagcagttcagggag
gagccggtatctgaaacgctcaaggccgggcggctccacacgcgggtcagccgctgccag
gtgtgtatgaaaagcctgtag
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integrated database retrieval system
