Mirounga leonina (Southern elephant seal): 118012076
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Entry
118012076 CDS
T07472
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118012076 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118012076 (BARD1)
04121 Ubiquitin system [BR:
mlx04121
]
118012076 (BARD1)
03036 Chromosome and associated proteins [BR:
mlx03036
]
118012076 (BARD1)
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118012076 (BARD1)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
118012076 (BARD1)
Ubiquitin system [BR:
mlx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
118012076 (BARD1)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
118012076 (BARD1)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
118012076 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
ANK_LRRK2
zf-C3HC4
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
118012076
NCBI-ProteinID:
XP_034863109
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MPGNRPPRVRSGNEPRPAPTMEPEGRRAWAHSRAALDRLEKLLRCSRCTHILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDDKLSDLKE
DTSRENLFNDAENKKNSIKMWFSPRSKKVRYVMSKVSVQTQPQVINDENAQQASMYEFVS
TSPPTSVSEKAKKASARSGKKQKKKTLAEINQKWNLEAEKEDGELDSKEELKEKLVSFCN
QPSVIPNPQTNGEIDLLASGSAVESQGCGSLTEVSLPVAEHIESPATESRNEEVTPKKKL
CANPHPSKQCLLSGPSGQCACRSRRSSPVPKRCRSSIPGTSRQHIVLSENKPSPGCPSPP
SSKLKVGDTLRRRKSNVSDESMSLSRGMPPAALNSPSYRRMMSSPSAAKLSPTSLMAVKR
NHRGETLLHIASIKGDVPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK
ALVNTTGYQNDSPLHDAAKNGHLDIVKLLISYGASRNAVNIFGLRPVDYADGENMKSLLL
LPEKNESSSTRHYSVMNTGQHRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCAEFDNTV
THVIVPGDTVQSTLKCMLGILNGCWILKFEWVKACLQRKACEQEEKYEIPEGPRQSRLNK
EQLLPKLFDGCYFYFGGTFKHHPKDNLIKLVAAAGGQVLSRKPKPDSDVTQTINTVAYHA
RPDSDQRFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaccggccgccgagggtccgctccgggaacgagcctcgtcctgcgcccacc
atggagccggaggggcgcagggcctgggcccacagccgcgccgcgctcgaccggctggag
aagctgctgcgctgctcgcgttgcactcatattctgagggagcctgtgtgtttagggggg
tgtgagcacatcttctgtagtaattgcgtaagtgactgcattggaaccggatgtccagtg
tgttataccccagcctggatacaagatgtgaagataaatagacaattggacagcatgatc
cagctttgtagtaagcttcggaatttgctacatgatgataagctttcagatttgaaagaa
gatacatctagggaaaatttatttaatgatgcagaaaataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcagatatgtcatgagtaaagtttcagtgcaaacc
cagcctcaagtgataaatgatgagaatgctcagcaggcttccatgtacgaatttgtttct
acaagtcctccaacaagtgtttctgagaaggctaaaaaggcttctgcaagatctggaaaa
aaacagaagaagaaaactttagctgaaatcaaccaaaaatggaacttagaggcagaaaaa
gaagatggtgaacttgactccaaagaggaattaaaggaaaagctggtgtccttctgcaac
cagccgtctgttatccctaatcctcagacaaatggtgagatagacttactcgccagtggc
tctgccgtggaatcacagggttgtggcagcctaactgaagtctctttaccagtggctgag
cacatagagtccccagcaacggagagcaggaatgaagaagtgactcccaagaagaagctc
tgtgcaaatcctcatccatctaagcagtgcttgctgtcaggtcccagtgggcaatgtgcg
tgtcgcagcagacggtccagtcccgtccctaagagatgcaggagcagcattcctggcacc
agcaggcagcacatagtgctttcggaaaacaaaccgtcgcctggctgcccctcaccaccc
tcaagcaaactcaaagttggtgacacattaaggcggagaaagagtaatgtatcggacgag
tccatgagcctctcacgaggtatgccacctgctgcactgaacagcccaagttacagacgg
atgatgtctagcccctcagcagcgaagctgtcacccactagccttatggctgtgaaaaga
aatcatagaggagagactctgctccatattgcttccattaagggcgatgtaccttctgtt
gagtacctcttacaaaatggaagcgacccaaatgttaaagatcatgctggatggacacca
ttgcatgaagcctgcaatcatgggcacctgaaggtagtggagttgttgctacagcacaag
gcattggtgaacaccactggctatcagaacgactcaccgcttcatgatgccgccaagaac
gggcacctggatatagtcaagctcttaatttcctacggagcctccaggaacgccgttaac
atatttggtttgcggcctgtggattatgcagacggtgaaaatatgaaatcactattgctg
ctgccagagaagaatgaatcatcatcaactcgccattactcagtaatgaacactggtcag
catagggatggacctcttgtgcttataggcagtgggctttcttcagaacaacaaaaaatg
ctcagtgagcttgcagcaattcttaaggctaaaaaatgtgctgaatttgacaatacagta
actcatgtcattgttcctggggatacagttcaaagtaccctaaaatgtatgcttgggatt
ctcaatggatgttggatcttaaaatttgaatgggtgaaagcatgtctacagagaaaagca
tgtgaacaggaggaaaaatacgagatccctgaaggtccacggcaaagcaggctcaacaag
gaacagctgttgccaaagctgtttgatggatgctacttctattttgggggaaccttcaaa
caccatccaaaggacaaccttattaagcttgtcgctgcagcagggggccaggtccttagt
agaaagcccaagccagacagtgacgtgactcagaccatcaatacagttgcgtaccacgcg
agacctgattccgatcagcgcttctgcacacagtatatcatctacgaagatttgtctaat
catcgcccagagagggttcggcagggcaaagtctggatggctccttccagctggtttatt
gattgtgtgatgtcctttgagttgctccctcttgacagctga
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