Mirounga leonina (Southern elephant seal): 118012228
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Entry
118012228 CDS
T07472
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04611
Platelet activation
mlx04820
Cytoskeleton in muscle cells
mlx04926
Relaxin signaling pathway
mlx04933
AGE-RAGE signaling pathway in diabetic complications
mlx04974
Protein digestion and absorption
mlx05146
Amoebiasis
mlx05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118012228 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
118012228 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
118012228 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
118012228 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
118012228 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
118012228 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
118012228 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mlx00536
]
118012228 (COL3A1)
Glycosaminoglycan binding proteins [BR:
mlx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118012228 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
118012228
NCBI-ProteinID:
XP_034863446
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MMSFVQKGTWLLLALLHPTVILAQPQAVDGGCSHLGQSYADRDVWKPEPCQICVCDSGSV
LCDDIICDEQELDCPNPEIPFGECCAVCPQPPTAPPRPPNGHGPQGPKGDPGPPGIPGRN
GDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQFESYDVKAGVGGGGITGYPGPAGPPG
PPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPG
ERGLPGPPGIKGPAGMPGFPGMKGHRGFDGRNGEKGDTGAPGLKGENGLPGENGAPGPMG
PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPG
SSGSPGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGEMGPAGIPGAPGLIGARGPPGPAG
TNGAPGQRGGAGEPGKNGAKGEPGPRGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPG
AAGERGVPGFRGPAGANGLPGEKGPSGERGGPGPAGPRGAPGEPGRDGVPGGPGMRGMPG
SPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG
GPGPQGPAGKNGETGPQGPPGPTGPGGDKGDPGPPGPQGLQGLPGTSGPPGENGKPGEPG
PKGESGSPGTPGGKGDSGAPGERGPPGAVGPMGPRGGAGPPGPEGGKGAAGPPGPAGSAG
TPGLQGMPGERGGPGGLGPKGDKGEPGSAGADGAPGKDGPRGPTGPIGPPGPAGQPGDKG
EGGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPG
IAGPPGGAGPAGPPGPQGVKGERGSPGGPGSAGFPGARGLPGPPGNNGNPGPPGPSGAPG
KDGATGPPGNNGAPGNPGVSGPKGDAGQPGEKGSPGSQGPPGLPGPLGSAGITGARGLAG
PPGIPGPRGSPGPQGVKGESGKPGAAGHNGERGPPGPQGLPGLAGTAGEPGRDGNPGSDG
LPGRDGAPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPSGAPGPAG
SRGPPGPQGPRGDKGETGERGSSGIKGHRGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRG
PVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGG
AAAMGSIGGAEKAGGFAPYYGDEPMDFKINTEEIMTSLKSVNGQLESLLSPDGSRKHPAR
NCRDLKFCHPELKSGEYWVDPNQGCKLDAIKVFCNMETGETCINASPWTVPRKNWWTDSS
AEKKHVWFGESMDGGFQFSYGNPELPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYMD
HASGNVKKALRLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWGKTVFEYRTRKAVRLP
IVDIAPYDIGGPDQEFGVDIGPVCFL
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaggggacctggttacttcttgctctgcttcatcccactgtt
attttggcacaaccgcaagctgttgacgggggatgctcccatcttggtcagtcctatgcg
gatagagatgtctggaagccagaaccttgccaaatatgtgtctgtgactcaggatctgtt
ctctgtgatgacataatatgtgacgaacaagaattggactgtcccaacccagaaatccca
tttggagaatgttgtgcagtgtgcccccagcctccaacagctcctcctcgccctcctaat
ggtcatggacctcaaggccctaagggagatccaggcccacctggtattcctgggagaaat
ggtgatcctggtattccaggacaaccaggttcccctgggtctcctggcccccctggaatc
tgtgaatcatgccctactggtcctcagaactattctccccagtttgagtcatatgacgtc
aaggctggagtaggaggaggaggaatcacaggctatcctgggccagctggtccccctggc
cctcctggtccccctggtacatctggtcatcctggctccccgggttctccaggataccaa
ggtccccccggtgaacctgggcaagctggtccatcaggccctccaggaccccctggtgct
ataggtccatctggtcctgctggaaaagatggagaatcaggaagacccggacgacctgga
gagcgagggttgcctggacctccaggtataaaaggtccagctggtatgcctggattccct
ggtatgaaaggacatagaggctttgatggacgaaatggagaaaagggtgatacaggtgct
cctggattaaagggtgaaaatggcctcccaggtgaaaatggagcccctggacccatgggt
cccagaggagctcctggtgagagaggacggccaggactgccaggagctgcgggggctcga
ggtaatgatggtgctcgcggaagtgatggacaaccaggtcctcctggtccccctggaact
gcaggattccctggttctcctggtgctaagggtgaagttggacctgctggatctcctggt
tcaagcggctcccccggacaaagaggagaacctggacctcagggccatgctggtgctcca
ggtcctcctggccctcctgggagcaatggtagtcctggtgggaaaggtgaaatgggtcct
gctggcattcctggagctcctggactgataggagcccggggtcctcctggaccagctggt
accaatggtgctcctggacagcgaggtggtgcaggtgaacctggtaaaaatggtgccaaa
ggagagccagggccacgcggtgaacgtggggaagctggttctccaggtattccaggacct
aaaggtgaagatggcaaagatggttcacctggagaacctggtgcaaacggacttccagga
gctgcaggagaaaggggtgtgcctggattccgagggcctgctggagccaacggccttcca
ggagaaaagggtccctctggggagcgtggtggtcccggccccgcagggcccagaggagct
cccggagaacctggccgagatggtgtccctggaggtccaggaatgaggggtatgcccgga
agcccaggagggccaggcagcgatggaaaaccagggcctcccggaagtcaaggagaaagt
ggtcgaccaggtcctccaggcccatctggtccccgaggtcagcctggtgtcatgggtttc
cctggtcctaaaggaaatgatggtgcacctggcaagaatggagaacgaggtggccctgga
ggtcctggccctcagggtcctgctggaaagaatggtgaaactggacctcagggtccccca
ggacctactgggccaggtggtgacaaaggagatccaggaccccctggtccacaaggattg
caaggtttgcctggaaccagtggacctccaggagaaaatggaaaacctggtgaaccaggt
ccaaagggtgaatctggttcacctggaactccaggaggcaagggtgattcgggagcccca
ggcgaacgaggacctcccggagccgtggggcccatgggaccgagaggtggagccggcccc
cctggtcccgaaggaggaaagggtgctgctggaccccctgggccagctgggtctgctggg
actcctggtctgcaagggatgcctggggaaagaggaggtcctggaggcctcgggccaaag
ggtgacaagggcgaaccaggcagcgcaggggcggatggtgctccagggaaagacgggccg
cggggtcctactggtcccattggtccccctggcccagctggtcagcctggagataagggt
gaaggtggtgcccctggacttccgggtatagctggtcctcgtggtggccctggtgagaga
ggcgaacacgggcctccaggacctgctggcttccctggtgctcctggacagaatggtgag
cctggtgctaaaggagaaagaggtgctcctggtgagaaaggtgaaggagggccccctggc
atcgcaggaccccctgggggtgctgggcctgctggtccccctggtccccagggcgtcaaa
ggtgaacgcggcagtcctggtggtcctggttctgctggctttcctggtgctcgtggtctt
cctggtcctcctggtaataatggtaacccaggccccccgggccccagcggtgctccaggc
aaggacggggccaccggtccacctggtaataatggtgctcccggcaaccctggagtgtct
ggacctaaaggtgatgctggccaacctggcgagaagggatcccccggctcccagggcccc
ccgggacttccaggcccactgggaagtgccgggattaccggagccaggggtcttgcggga
ccaccgggcatcccgggtcctaggggaagcccaggcccacagggtgtcaagggtgaaagt
gggaaaccaggagctgctggtcacaatggagaacgtggtcctcctggaccccagggtctt
cctggtctggctggtacagctggtgaacctggaagagacggaaacccaggatcggatggt
cttccaggccgagatggagctcctggtggcaagggtgatcgtggagaaaatggttcccct
ggtgcccccggtgctcctggtcatccaggcccccctggtcccgttggtccagctggaaag
agtggtgacagaggagaaactggccccgctggcccttctggtgctccaggtcctgctggt
tcccgaggtcctcctggtccccaaggtccacgtggtgacaaaggtgaaacaggtgaacgt
ggttctagtggcatcaaaggacatcgaggattccctggtaatccaggtgccccaggttct
ccaggtcctgctggtcaccaaggtgccgttggtagcccaggacctgcaggcccgcgagga
cctgttggacccagtgggcccccaggcaaagatggcacgagcggacatccgggtcccatt
ggaccgccagggcctcgagggaacagaggtgaaagagggtctgagggctccccaggccac
ccaggacaaccgggccctcctggacctcctggtgctcctggtccgtgctgtggtggtggg
gctgctgccatgggttctatcggaggggctgaaaaagctggtggttttgccccatattat
ggagatgaaccgatggatttcaaaatcaacaccgaggagattatgacttcactcaaatcg
gtcaacggacaactggaaagcctccttagtcctgatgggtcccgtaaacaccctgctcgg
aactgccgagacctgaaattttgccatcctgaactcaagagcggagaatattgggttgat
cctaaccaaggttgcaagttggatgctattaaagtattctgcaatatggaaactggggaa
acgtgcataaatgccagtccttggactgttccacgtaagaactggtggacagattctagt
gctgagaagaaacatgtttggtttggagaatctatggatggtggttttcagtttagctat
ggcaatcctgaacttcctgaagatgtcctcgatgtccagctggccttcctccgacttctc
tccagccgggcctcccagaacatcacgtatcactgcaagaatagcattgcatacatggat
catgccagtgggaatgtaaagaaagccttgaggctgatgggctcaaatgaaggtgaattc
aaggctgaaggaaatagcaaattcacatacacagtcctggaggatggttgcactaaacac
actggggaatggggcaaaacagtcttcgaatatcgaacacgcaaggccgtgagactacct
attgtagatattgcaccctatgatattggtggtcctgatcaagaatttggtgtggacatt
ggccctgtttgctttttataa
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integrated database retrieval system
