Mirounga leonina (Southern elephant seal): 118012394
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Entry
118012394 CDS
T07472
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04622
RIG-I-like receptor signaling pathway
mlx05161
Hepatitis B
mlx05162
Measles
mlx05164
Influenza A
mlx05168
Herpes simplex virus 1 infection
mlx05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118012394 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
118012394 (IFIH1)
05171 Coronavirus disease - COVID-19
118012394 (IFIH1)
05164 Influenza A
118012394 (IFIH1)
05162 Measles
118012394 (IFIH1)
05168 Herpes simplex virus 1 infection
118012394 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mlx04054
]
118012394 (IFIH1)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118012394 (IFIH1)
Pattern recognition receptors [BR:
mlx04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
118012394 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SNF2-rel_dom
SWI2_SNF2
Cas3-like_C_2
DUF3638
Motif
Other DBs
NCBI-GeneID:
118012394
NCBI-ProteinID:
XP_034863781
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MSNGYSADRSFRYLISCFRARVKTYIQVEPVLDYLNFLPDEVKEQIQRTAINAGNMQAAD
QLLSTLEKGGWPPGWTRQFLVALQRAGSVLAARYLNPELTDLPSPSSENVHDECLQLLNL
LQPTLVDKLLVRDILDKCVEKELLTNEDRNRISAAESNGNESGVRELLKRIVQKENWFSA
FLIVLHQTENHALIQELTGTTCFESNAETENLSQEGGPDIQEAVLLATGQPSPEREGWDE
ESDSLESSLVDSSVVSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEENVAERA
SSEPELHLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVI
VLVNKVPLVEQLFRKEFEPFLKKWYHTIGLSGDTQLKISFPEVVKTYDVIISTAQILENS
LLNSEKGEDDGVQFSDFSLIVIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKECKPVIP
LPQILGLTASPGVGGAKRQAEAKEHILKICANLDACTIKTVKENIDQLKDQIKEPCKKFA
IADDTREDPFKDKLLEIMNKIQSFCQMTPMSDFGTQPYEQWTTQMEKKAAREGNRKERVC
AEHLRKYNEALQINDTIRTIDAYNHLEAFYNDEKEKKYAVQEDDSDESGEDGDGDGDEDE
DDEKKPLSLDRTDRFLMDLFFENRRLLKKLAENPKHENEKLTKLRNTIMEQYTRTEESAR
GIIFTKTRQSAYALSQWITENKKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRT
GKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSNSGV
IEREIVNDFREKMMYKAIDHVQNMNPEEYARKILELQMQSIMEKKMKIKRSIAKYCKENP
SSINFLCKNCSVLACSGEDIHVIEKMHHVNMTPVFKELYIVRENKALRKKFVDYQTNGEI
ICKKCGQAWGTMMVHKGLDLPCLKIKNFVVVFKNNMPKKQYKKWVELPITFPDLDYSQYC
LCSDED
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacggctactcggcagacaggagtttccgctatctcatctcgtgtttcagggcc
agagtgaaaacgtacatccaggtggagcccgtactggactacctgaactttctgcccgat
gaggtgaaggagcagattcagaggacggccatcaacgctgggaacatgcaggcagctgat
caacttctgagcactttggagaagggaggctggccccctggctggaccagacaatttctg
gtggctcttcagagagcaggcagcgttttagccgcccgctacctgaacccggagctcacc
gacttgccttctccatcctctgagaacgttcatgatgagtgtctccagctactgaacctc
ctccagcccacgctggtggacaaacttctggttagagatatcttggacaagtgtgtggag
aaggaactgttgacaaatgaagacagaaaccggatttctgctgcagaaagcaatggaaat
gaatcaggtgtaagagagctactgaaaaggatcgtgcagaaagaaaactggttttctgca
tttctgattgttctgcatcaaacagaaaaccacgcccttatccaagagctaacaggcacc
acttgctttgaaagcaatgcagagactgagaacttatcccaagaaggtggccccgacatt
caagaggcagttcttttagccacaggtcaaccaagtccagagagagagggctgggacgag
gagagtgattcgctggaatcgtctttggtggattcttctgttgtttcagaatcagacaca
agtttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatg
ggcagtgattcaggcaccatgggaagtgattcagatgaagaaaatgtggcagaaagagca
tcttctgagccagaactgcatctcaggccttaccaaatggaagtcgcccaaccagccttg
gaggggaaaaatatcattatatgcctccctacagggagtgggaaaaccagagtggctgtt
tacattgccaaggatcacttggacaagaagaaaaaagcatctgaacctggaaaagttata
gtccttgtcaataaggtgccactggttgaacagctcttccgcaaagagtttgaaccattt
ttgaagaaatggtatcatacaattggattaagtggagatacccaattaaaaatatcattt
ccagaagttgtcaaaacctatgatgttatcatcagtacagctcaaatccttgaaaactcc
cttttaaattcagaaaaaggagaagatgatggtgtccagttttcagacttttccctcatc
gtcattgatgaatgccatcacaccaacaaagaagcagtctataataacatcatgaggcgt
tacttgaaacagaagttgaaaaacaataaactcaagaaagaatgcaaaccagtgattcct
ctacctcagatactaggactaacagcttcaccaggtgttggaggagccaaaaggcaagct
gaagccaaggaacacattttaaaaatatgtgccaatctcgatgcatgtaccattaaaact
gtgaaagaaaatattgatcaactcaaagaccaaataaaagagccatgcaaaaagtttgca
attgcagatgacaccagagaagatccatttaaagataaacttttagaaataatgaacaag
attcaaagtttttgccaaatgactccaatgtcagattttggaactcaaccctatgaacaa
tggaccactcaaatggaaaaaaaagctgcacgagaaggaaatcgcaaagaacgtgtttgt
gcagagcatttgaggaagtacaatgaggccctacaaattaatgatacaattcgaacaatt
gatgcatataatcaccttgaagctttctataatgatgagaaagagaagaagtatgcggtc
caagaagatgatagtgatgagagtggtgaggatggtgatggtgatggtgatgaagatgaa
gatgatgaaaagaaacctttgagcctggataggacagatagatttctcatggatttattt
tttgaaaacaggagactgttgaaaaagctggctgaaaacccaaaacatgaaaatgaaaag
ctgaccaaattaagaaacaccataatggaacaatatacaaggactgaggaatcggcccga
ggaataattttcacaaaaacaagacagagtgcatatgccctttctcagtggattactgaa
aataaaaaatttgcagaagtaggagtcaaagcccatcatctgattggagctggacacagc
agtgagttcaagcccatgacacagaatgaacaaaaagaagtcattagtaaattccgcaca
ggaaaaataaatctgctcatcgctaccacagtggctgaagaaggtctggatattaaagaa
tgtaatatcgttattcgttacggcctcgtcactaatgaaatagccatggtccaggcccgt
ggtcgagccagagctgatgagagcacctacgtcctggttgcccacagtaactcaggagtt
attgaacgtgagatagttaacgatttccgagagaaaatgatgtataaagctatagaccat
gttcaaaatatgaacccagaggagtatgctcgtaagattttggaattacagatgcaaagt
ataatggaaaagaaaatgaaaatcaagagaagtattgcaaagtactgcaaggaaaaccca
tcatcaataaatttcctctgcaaaaactgcagtgtgctagcctgctctggagaagatatc
cacgttattgagaagatgcaccacgtcaacatgacaccagtattcaaggaactctacatt
gtgagagaaaacaaagcactacgaaagaaatttgtagactatcaaacaaatggcgagatt
atctgcaaaaaatgtggccaagcttgggggacgatgatggtgcacaaaggcttagatttg
ccttgtctcaaaataaagaattttgtagtggttttcaaaaataatatgccaaagaaacaa
tacaaaaagtgggtagaattacctatcacatttcccgatcttgactattcacaatattgt
ttgtgtagtgatgaagattga
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