Mirounga leonina (Southern elephant seal): 118012405
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Entry
118012405 CDS
T07472
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03013
Nucleocytoplasmic transport
mlx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118012405 (UPF3B)
03015 mRNA surveillance pathway
118012405 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118012405 (UPF3B)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118012405 (UPF3B)
mRNA cycle factors
P-body specific factors
118012405 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
118012405
NCBI-ProteinID:
XP_034863810
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGATGSGGGASGDSTKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLNDERASGQSCTLPKRSDGEPKDEKPKRPEEESGRDYRERERDYERDQERIL
RERERERLKRQEEERRRQKERYEKEKAFKRKEEELKKEKEAVRDKGKKTESTESVGSSEK
TEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIEKKQESGISHRK
EGGEE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggagcataggcctaaagagaagcgagtaaccctgttgactcccccg
ggggccacaggcagcggcggtggggcttcgggggacagcaccaaaggggaagataagcag
gatcgaaataaggagaagaaagaggcgctgagcaaggtggtaattcggagattacctccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgccggagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcgaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagaaggagg
cgagaaatagaaaggaaaagacaaagagaagaagagaggagaaaatggaaagaagaagaa
aaacgaaaaaggaaagatatagaaaagctaaagaagatagacagagttccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctactcaagaagccagaaaaaggagatgaaaaagaattagataaaagagaaaaa
gccaagaaactggacaaagagaatctgaatgatgaaagagccagtgggcagagttgtaca
ctgcccaagcgctctgatggcgaacctaaagatgaaaagcctaagaggcctgaagaggag
agtggcagagactacagggagcgggagcgggactatgagcgagaccaagagcgcatcctg
cgggaaagggagagggagaggctgaagcggcaggaagaggagcgccgcaggcagaaggag
cgctacgagaaggagaaggcttttaaaagaaaggaagaagaattgaaaaaagagaaagaa
gcggttcgggataaaggaaagaagactgaaagtacagaatcagtaggcagctcagaaaaa
actgaaaagaaagaggaagtggttaagagagatcgcataagaaacaaggatcgcccagca
atgcagctttaccaaccaggagctcgaagccgaaatcgactctgtccgcctgatgacagc
accaagtctggagattcagcaatagaaaaaaagcaggaaagtggtattagccatagaaaa
gaaggaggagaggagtga
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