Mirounga leonina (Southern elephant seal): 118012567
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Entry
118012567 CDS
T07472
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03022
Basal transcription factors
mlx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118012567 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
118012567 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlx03021
]
118012567 (ERCC3)
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118012567 (ERCC3)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118012567 (ERCC3)
Transcription machinery [BR:
mlx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118012567 (ERCC3)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118012567 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
118012567
NCBI-ProteinID:
XP_034864130
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MGKRDRGDRDKKKSKKRHYEDEEDDEDDVPGNDSQEAVPSAAGKQVDESGTKVDEYGAKD
YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA
YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIQHLLQDPVIRECRLRNSEGEATELITETFTSKSAIAKTAEGSGGPSTSRVTDPQG
KSDIPTDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND
SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKAQFKMWSAIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRS
WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGLEDEELAFSTREEQQQLLQKVLAAT
DLDAEEEVVAGEFASRSSQVSRRFGTMSSMSGADDTVYMEYHSARSKASTKHVHPLFKRF
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaagagaccggggggaccgcgataagaagaagtccaagaagcggcactacgag
gatgaagaagatgatgaagacgacgtccctgggaacgactctcaggaagcggtcccctcg
gcggccgggaagcaggtggatgagtccggcaccaaagtggatgaatatggagccaaggac
tacaggctgcagatgccgctgaaggacgaccacacctcgaggcctctctgggtggctcct
gatggccacatcttcttagaagccttctctccagtttacaaatatgctcaagacttcctg
gtggccatcgcagagccagtgtgccgaccaacccacgtgcatgagtacaaactgactgcc
tactccctgtatgcagctgtcagtgttgggttgcaaaccagtgacatcactgagtacctc
aggaagctcagcaagacgggagtccctgatggaattattcagtttattaagttgtgtact
gtcagctatggaaaagtcaagctggtcctgaagcacaacaggtacttcgttgaaagttcc
caccctgatgtcatccagcatcttctccaggatccagtgatccgggaatgccgcctgcgg
aactctgagggggaggctacagagctcatcacagagaccttcaccagcaagtctgctatt
gccaagactgctgaaggcagtggtgggccttctacttcccgggtgacagacccacagggt
aaatctgacatccccacggacctgtttgacttttatgaacaaatggacaaggatgaagaa
gaagaagaagagacccagacagtgtcttttgaagtcaagcaggaaatgattgaggaactc
cagaaacgttgcatccacctggagtaccctctgttggcagaatatgacttccggaatgat
tctgttaaccctgatatcaacattgacctgaaacccacagctgtccttagaccttatcag
gagaagagcttgcggaagatgtttgggaatggacgtgctcgttctggggtcattgttctt
ccttgtggtgctgggaagtccctggttggcgtgacagctgcatgcacggtgagaaagcgc
tgtctggtgctgggcaactcagctgtgtctgtggagcagtggaaagcccagttcaagatg
tggtccgccatcgacgacagccagatctgccgcttcacctccgacgccaaggacaagccc
ataggctgctccattgccattagcacctactccatgctgggccacaccaccaaaaggtcc
tgggaggctgagcgagtcatggagtggctcaaaactcaggagtggggcctcatgatcctg
gatgaagtccataccataccagccaagatgttccgacgggtgctcaccatcgtgcaggcc
cactgcaagctgggtttgactgcaaccctcgtccgggaagatgacaaaatcgtcgattta
aattttctgattgggcccaagctctacgaagccaactggatggagctgcagaacaacggc
tacatagccaaagtccagtgtgctgaggtctggtgcccaatgtctcctgagttttaccgg
gagtatgtggcaattaaaaccaagaaacgaatcttgctgtacaccatgaaccccaacaaa
ttcagagcttgccagtttctgatcaagtttcatgaaaggaggaatgacaagattattgtc
tttgctgacaacgtgtttgccctgaaggaatatgccattaggctgaacaaaccctatatc
tatggtcctacatcccaaggagagaggatgcagattctccagaatttcaagcacaacccc
aaaatcaacaccatcttcatatccaaggtgggcgacacatcgtttgatctgccagaagca
aatgttctcattcagatctcatctcatggtggctcccggcggcaggaggcccagaggctg
gggcgagtgctccgagccaaaaaagggatggttgccgaggagtacaatgccttcttctac
tcgttggtgtcccaggacacacaggaaatggcttactcgaccaagcggcagaggtttttg
gtagatcagggttatagctttaaggtgatcacaaagcttgctggcctggaggacgaagag
ctggcattttccacgagggaagagcagcagcagctcttacagaaagtcctggcggccacc
gacctggatgctgaggaggaggtggtggcaggggagtttgcctccagatccagccaggta
tctcggcgctttggaaccatgagctccatgtctggggctgacgacactgtgtacatggag
taccactcggctcggagcaaggcttccacgaagcacgtgcacccgcttttcaagcgcttc
aggaaatga
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integrated database retrieval system
