Mirounga leonina (Southern elephant seal): 118013071
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Entry
118013071 CDS
T07472
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mlx04515
]
118013071 (DSCAML1)
Cell adhesion molecules [BR:
mlx04515
]
Immunoglobulin superfamily
DSCAM family
118013071 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
C2-set_3
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
118013071
NCBI-ProteinID:
XP_034864617
LinkDB
All DBs
Position
Unknown
AA seq
1917 aa
AA seq
DB search
MRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITHHGGLYISDVQKEDALSTY
RCITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWAGHTVELPCTASGYPIPA
IRWLKDGRPLPADSRWTKRITGLTISDLRTEDSGTYICEVTNTFGSAEATGTLTVIDPLH
VTLTPKKLKTGIGSTVILSCALLGSPEFTIRWYRNTELVLPDEAVSIRGLSNETLLITSA
QKSHSGAYQCFATRKTQTAQDFAIIVLEDGTPRIVSSFSEKVVNPGEQFSLMCAAKGAPP
PTVTWALDDEPIVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNSVGSAEY
QARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFEN
GTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVSVKVPPLIQPFEFPPASIGQLLYIP
CVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAA
TVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGSPQQYH
PVPLTGRTQILANSSLLIRHVLEEDMGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPN
TTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAITTKDNGDEVVSTLKLKP
ADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSI
ITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKE
LTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQ
YSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPEN
VRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNITTTRERVELRG
MEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPSSASSVVVSWLPPAK
PNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNS
SEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSM
DGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTSA
SSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSGERSFKLDSLKCGTWYKVKLA
AKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWNNGGCPITAIVLE
YRPKGTWAWQGLRANSSGEVFLTELREATWYELRMRACNSAGCGNETAQFATLDYDGSTI
PPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKRLKRLRDAKSLAEMLIS
KNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTDAEFSQAVNPQ
SFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKSVKAAHSTRNRYSSQWTLTKCQAS
TPARTLASDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYE
HAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEPGICRFTASPPKP
QDADRGKNVAVPIPHRANKSDYCNLPLYAKSEAFFRKADGREPCPVVPPREASVRNLART
YHTQARHLTLDPASKPLGLPHPGGPAAAATATLPQRTLAMPAPPAGTAPPAPGPTPAEPP
AAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQGAGAYSKSYTLV
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggaaacgtggccgtcttcaagtgcctcatcccctcttcagtgcaggaatatgtt
agcgttgtgtcctgggagaaggacacggtctccatcatcccagaaaacaggttttttatt
acacaccacggcgggctgtacatctctgacgtgcagaaggaggatgccctctccacctac
cgctgcatcaccaagcacaagtatagtggggagacccggcagagcaatggggcccgcctc
tccgtaacagaccctgccgagtcgatccccaccatcctggatggcttccactcccaggaa
gtgtgggcgggccacaccgtggagctgccctgcactgcctccggctaccccatccctgcc
atccgctggctcaaggacggccggcccctcccggccgacagccgctggaccaagcgcatc
acggggctgaccatcagtgacctgcggacggaggacagtggcacctacatttgtgaggtc
accaacaccttcggctctgcagaggccacgggtaccctcacagtcattgacccccttcac
gtgaccctgacaccaaagaagctgaagaccgggattggcagcacagtcatcctttcctgt
gccctgctgggctccccggaattcaccatccgctggtatcgcaacactgagctggtgctg
cccgacgaggccgtctccatccgcgggctcagcaacgagactctgctcatcacctcagcc
cagaagagccactccggggcctaccaatgctttgccacccgcaagacccagaccgcgcag
gacttcgccatcattgtgctggaggatggcacgccccgcatcgtctcgtccttcagcgag
aaggtggtcaaccccggggagcagttctcgctgatgtgtgcggccaagggcgccccgccc
cccactgtcacctgggccctggacgacgagcccatcgtgcgggatgggagccaccgcacc
aaccagtacaccatgtcggacggcaccaccatcagccacatgaacgtcacgggcccccag
atccgcgacgggggcgtataccgatgcacggcgcggaactcggtgggcagtgctgaatat
caggcgcgaataaacgtaagaggcccccccagcatccgggcgatgaggaacatcaccgcc
gtcgccgggcgggacaccctcatcaactgcagggtcatcggctacccctactactccatc
aagtggtataaggacgccctgctgctgcccgacaaccaccggcaggtggtgttcgagaac
gggacgctgaagctgaccgacgtgcagaagggcatggatgagggggagtacctgtgcagt
gtcctcatccagccccagctgtccatcagccagagcgtccacgtgtctgtcaaagtgccc
cctctaatccagccctttgagttcccacccgcctccatcggccaactgctctatatcccc
tgcgtggtgtcctcgggggacatgcccatccgcatcacctggaggaaggacggacaggtg
atcatctcaggctcgggcgtgaccatcgagagcaaggaattcatgagctccctgcagatc
tccagcgtctccctcaagcacaacggcaactacacgtgcatcgccagcaacgcggcggcc
accgtgagccgggagcgccagctcatcgtgcgtgtgcccccgcgatttgtggtgcagccc
aacaaccaggacggcatctacggcaaagctggcgtgctcaactgctcagtggatggctac
cccccgcccaaggtcatgtggaagcatgccaaggggagcgggagcccacagcagtaccac
ccggtacccctcaccggccgcacccagatcctggccaacagctcgctgctgatccgccac
gtcctggaagaggacatgggctactacctctgccaggccagcaacggcgtgggcaccgac
atcagcaagtccatgttcctcaccgtcaagatcccagccatgatcacctcccaccccaac
accaccatcgccatcaagggtcacgcgaaggagctcaactgcacagcgcggggtgagcgg
cccatcatcatccgctgggagaagggggacacggttatcgaccccgaccgagtcatgcgg
tacgccatcaccaccaaggacaacggcgacgaggttgtctccacgttgaagctcaagcca
gctgaccgtggggactctgtgttcttcagctgccatgccatcaactcatatggggaggac
cggggcttgatccaactcactgtgcaagagccccctgaccccccagagctggagatccgg
gaggtgaaggcccggagcatgaacctgcgctggacccagcgattcgacgggaacagcatc
atcacaggcttcgacattgaatacaagaacaaatcagattcctgggacttcaagcagtcc
acacgcaacatctcccccaccatcaaccaggccaacatcgtggacttgcacccagcatct
gtgtacagcatccgcatgtactccttcaacaagattggccgcagcgagccgagcaaagag
ctcaccatcagcacggaggaggctgctcccgatgggccccccatggatgtcaccttgcag
ccagtaacctcacagagtatccaagtgacctggaaggcgcccaagaaggagctgcagaat
ggcgtcatacggggctaccagattggctacagggagaacagccctggcagcaacggacag
tatagcatcgtggagatgaaagccaccggggacagtgaggtctacaccctggacaacctc
aagaagttcgcccaatatggggtggtggtccaggccttcaatcgggctggcacagggccc
tcatccagcgagatcaatgccaccaccctggaggacgtgcccagccagccccccgagaat
gtccgggccctgtccatcacctccgatgtggctgtcatctcctggtcggagcccccacgc
agcacgctcaatggagtcctcaaaggctatcgggtcatcttctggtcactctatgtggat
ggggagtggggcgagatgcagaacatcaccaccacacgggagcgggtggagctgcgaggt
atggagaagttcaccaactacagcgtgcaggtgctggcctacacccaagccggggacggc
gtgcgcagcagcgtgctctacatccagaccaaggaggatgttccaggtccccctgctggc
atcaaagctgtcccttcctccgccagcagtgtggtcgtgtcttggctccccccagccaag
cccaatggggtgatccgcaagtacaccatcttctgctccagccctgggtctggccagccg
gctcccagcgagtacgagacgagtccggagcagctcttctaccggatcgcccacctgaac
cgtgggcagcagtatttgctgtgggtggctgctgtcacctctgctggccggggcaacagc
agcgagaaggtcaccattgagcccgcaggcaaggccccagcaaagatcatctcatttgga
ggcaccgtgacaaccccctggatgaaagatgtccgactgccttgcaattcggtgggagat
ccagcccctgctgtgaagtggaccaaggacagtgaagactcagccatccccgtgtccatg
gatgggcaccggctcatccataccaatggcacgctgctgctgcgtgctgtgaaggctgag
gactcgggctactacacctgcacggccaccaacactgggggctttgacaccatcatcgtc
aaccttctggtgcaagttcccccggaccagccccgcctcactgtctctaaaacctccgct
tcgtccatcaccctgacctggattccaggtgacaatgggggcagctccatccgaggcttc
gtgctgcagtactcggtagacaacagcgaggaatggaaggacgtgttcatcagctcaggc
gagcggtccttcaagctggacagcctcaagtgtggcacgtggtacaaggtgaaactggca
gccaagaacagcgtgggctccgggcgcatcagcgagatcatcgaggccaagacccacggg
cgggagccctccttcagcaaagaccagcacctgttcacgcacatcaactccacgcatgct
cggcttaacctgcagggctggaacaacgggggctgcccgatcacagccatcgtgctggag
taccggcccaagggcacctgggcctggcaggggctgcgggccaacagctccggggaggtg
tttctgaccgagctgcgcgaggccacgtggtacgagctgcgcatgcgggcttgcaacagc
gctggctgcggcaacgagactgcgcagttcgccaccctggactatgacggcagtaccatc
cctcccatcaagtctgctcaaggggagggggatgatgtgaagaagctgttcaccatcggc
tgcccggtcatcctggccactctgggggtggcactgctcttcatcgttcgcaagaagagg
aaggagaagcggctgaagcgtctccgagatgcaaagagtctggcagaaatgttgataagt
aagaacaaccgaagttttgacacccctgtgaaggggccacctcagggcccgaggctacac
attgacatccccagagtccagctgctcatcgaggacaaggagggcatcaagcagctggga
gatgacaaagccaccatccccgtgacggatgctgagttcagccaagctgtcaacccacag
agtttctgcactggtgtctccttgcaccacccagccctcatccagagcacgggacccctc
atcgacatgtctgacatccggccaggcaccaacccagtgtccaggaagagtgtgaaggca
gcccacagcacccggaaccggtactcgagccagtggactctgaccaagtgccaggcctcc
acccctgcccgcaccctcgcctctgactggcgcactgtggggtcccagcacggggtcact
gtcacggagagtgacagctacagtgccagcctgtcccaggacacagacaaaggacggaac
agcatggtgtccactgagagcgcctcgtccacctatgaggagctggcccgggcctatgag
cacgccaagctggaggagcagctgcagcatgccaagttcgagatcaccgagtgcttcatc
tcggacagctcctccgaccagatgaccacaggcaccaacgagaacgccgacagcatgacg
tccatgagcacaccctcggagcccggcatctgtcgcttcaccgcctccccgcccaagccc
caggatgccgaccgaggcaagaacgtggcagtgcccatcccgcaccgggccaacaagagt
gactactgtaacctgcccctgtacgccaagtcggaggccttcttccgaaaggcagatggc
cgtgagccctgtccggtggtcccaccccgagaggcttccgtccggaacctggctcgaacc
taccacacccaggctcgccacctgaccttggaccctgccagcaagcccctgggcctcccg
cacccggggggccctgctgccgccgccacagccactttacctcagaggactctggccatg
ccagcacccccagccggcacagccccgccagctcccggccccacccctgccgagccccca
gctgcccccagcgctgcccctccggcccccagcaccgagcctccgcgggccgggggccca
cacaccaaaatggggggctccagggactcacttctcgagatgagcacatcgggggtaggg
aggtctcagaagcagggggcaggggcctactccaaatcctataccctggtgtag
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