Mirounga leonina (Southern elephant seal): 118013904
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Entry
118013904 CDS
T07472
Symbol
SMG5
Name
(RefSeq) protein SMG5 isoform X1
KO
K11125
protein SMG5
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118013904 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118013904 (SMG5)
03032 DNA replication proteins [BR:
mlx03032
]
118013904 (SMG5)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
118013904 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
118013904 (SMG5)
DNA replication proteins [BR:
mlx03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
118013904 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
118013904
NCBI-ProteinID:
XP_034865697
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MERGWRRVVLVWKGHEGLAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLRELCVKLM
FLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIGFYQHLLL
YIQSHYQLELQCCIDWTHVTDPLIGCRKPVSASGKEMDWAQMACHRCLMYLGDLSRYQNE
LAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGGKYYSVEAMYCYLRCIQSEVSFEG
AYGNLKRLYDKAAKMYHQLKKCEARKLSPSKKRCKDIKRLLVNFMYLQSLLQPRSSPVDS
ELTSLCQSVLEDFNLCLFYLPPSPSLSLASEGEEDYEGGYAFLPDLLIFQMVIICLMGVH
SLKRAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPTFQSEGTDEPLEKEEA
PGPEPPPAAPPAAPPSGEVRKSRKFSRLSCLRRRRHPPRAGEDSDLSEGFDSDSSHDSAR
ASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESRSDLEDMEDEEGTRSPALEPARPRSEA
PESLNGPLGPGEDSIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPPSEPHTVASRTPCV
NGDADKPSEPASEEGSESEGSESSGRSCRNERSVQEKLQVLAAEGLLPAVKVFLDWLRAN
PDLIVVCAQSSQSLWNRLSVLLNLLPAAGELQESGLALCPEVQDLLEGCELPDLPSSLLL
PEDTALRNLPPLRAAHRRFNFDTDRSLLSTLEESVVRICCIRSFGHFVARLQGSILQFST
EAGIFVSIAQSEQEGVLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPK
AQSAMSPYLVPDTQALCHHLPVIRQLATSGRFIVIIPRTVIDGLDLLKKEHPGARDGIRY
LEAEFKKGNRYIRCQKEVGKSFERHKLKRQDADAWTLYKILDSCKQLTLAQGAGEEDPSG
MVTIVTGLPLDNPGALSGPMQAALQAAAHASVDIKNVLDFYKQWKEIG
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggagcggggctggagacgcgttgtgttggtctggaagggccacgaagggctggctgtg
gtggaggctgtgcatcgacttgacctcatcctttgcaacaaaaccgcttatcaagaagtg
ttcaaaccagagaacattagcctgaggaacaagctgcgcgagctctgcgtcaagcttatg
ttcctgcacccagtggactatgggaggaaggctgaggagctgctatggagaaaggtatac
tacgaagttattcagcttatcaagactaacaaaaagcacatccacagccggagcaccttg
gaatgtgcctacaggacgcacctggtcgctgggattggcttctaccagcatctgcttctc
tatatccagtcccactaccagctggaacttcagtgctgcattgactggacccatgtcacc
gaccccctcataggatgcaggaagccagtgtcggcttcgggaaaggagatggactgggca
cagatggcgtgtcaccgatgtctcatgtacctgggggacttgtcgcgatatcagaatgaa
ttagctggtgtagacaccgagctgctagctgagagattttactaccaagccttgtcagta
gctccccagattggaatgcccttcaaccagctgggcacgcttgcaggcggcaagtactac
agcgtggaggccatgtactgttacctgcgctgcatccagtcggaagtgtcctttgagggg
gcctatgggaatctcaagcggctgtatgacaaggcagccaaaatgtaccaccagttgaag
aagtgcgaggctcggaaactgtctcccagcaagaagcgatgtaaagatatcaagaggttg
ctagtgaacttcatgtacctgcaaagcctcctgcagcccaggagcagcccggtggactca
gagctgacgtcactctgccagtcagtcctggaggacttcaacctctgcctcttctacctg
cccccgtcccccagcctcagcctggccagcgagggtgaggaggactatgagggcggctac
gctttcctcccggacctcctcatctttcagatggtcatcatctgtctcatgggcgtgcac
agcttgaagagagcaggctccaagcaatacagcgcggccattgccttcaccctggccctc
ttctcccacctggtcaaccacgtcaatatacggctgcaggctgagctggaggagggcgag
aaccccgtgccgacgttccagagcgaaggcacagatgagcccttggagaaggaggaggcg
ccaggccctgagccccctcccgcagcacctcctgcagcacctccctcaggtgaggtcaga
aagagccggaagttctcccgtctctcctgcctccgccgtcgccgccacccacccagagct
ggagaggacagtgacctgagtgaaggcttcgactcagactccagccacgactcggccagg
gccagcgagggctcggacagtgggtctgacaagagtctcgaaggtgggggaacggccttt
gatgctgagacagactcagaaatgaacagccaggagtcccggtcagacctggaagacatg
gaggatgaggaggggacacggtccccagccctggagcctgctcggcccaggtcagaggct
cccgagtctctcaatggccccctgggccccggtgaagatagcattgccagcaacctgcaa
gccatgtccacccagatgttccagaccaagcgctgcttccgactggcccccaccttcagc
aacctgctcctccagccccccagcgaacctcacaccgtggccagccgcacaccctgtgtc
aacggagatgcggacaagccctcggagccagcctctgaggagggctccgagtcggagggc
agtgagtccagcgggcgctcctgtcggaatgagcgcagcgtccaggagaagctacaagtt
ttggcggccgaaggcctgcttccggccgtgaaggtcttcctggactggttgcgggccaac
cctgacctcatcgtcgtgtgtgcgcagagctctcaaagtctgtggaatcgcctgtctgtg
ttgctgaacctgttgccagctgctggtgagctccaggagtctggcctggccctgtgtccc
gaggtccaagaccttctcgaaggttgtgaactgcctgacctgccctccagcctgctgctc
ccagaggacacagcccttcgtaatctgcctcccctccgggctgcccatcgacgctttaac
tttgacacggatcggtccctgcttagcaccttagaggagtcggtcgtgcgcatttgctgc
atccgcagctttggccacttcgtggcccgcctgcaaggcagcatcctgcagttcagcacg
gaggccggcattttcgtgagcatcgcccagtcggagcaggagggcgtgctgcaacaggcc
caggcgcagttccgcatggcacaggaggaagcccgtcggaacaggctgatgagagacatg
gcccagctgcgacttcagctcgaggtctctcagctggaagggagcctgcagcagcccaag
gcccagtcggcaatgtctccctacctcgtccccgacacccaggccctctgccaccacctc
ccggtcatccgccagctggccaccagcggccgcttcattgtcatcatcccaaggacggtg
atcgatggcctggacttgctgaagaaggaacacccaggggcccgggatgggatccgatac
ttggaggcagagtttaagaaaggaaacaggtatattcgctgccagaaagaggtgggaaag
agcttcgagcggcataagctgaagaggcaggatgcagacgcctggactctctataagatc
ctggacagctgcaaacagttgactctggcccagggggcaggtgaggaggacccgagcggc
atggtgaccatcgtcacaggccttccactggacaaccccggtgcgctctcaggccctatg
caggcagctctgcaggccgctgcacacgccagtgtggacatcaagaatgttctggacttc
tacaagcagtggaaggagattggttga
DBGET
integrated database retrieval system
