Mirounga leonina (Southern elephant seal): 118014452
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Entry
118014452 CDS
T07472
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mlx03000
]
118014452 (RC3H1)
04121 Ubiquitin system [BR:
mlx04121
]
118014452 (RC3H1)
Transcription factors [BR:
mlx03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
118014452 (RC3H1)
Ubiquitin system [BR:
mlx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118014452 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
zf-CCCH_4
FYVE
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
118014452
NCBI-ProteinID:
XP_034866659
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQPPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAVLPDE
GAVDLPSRKTPALPNGIVSAGNTVTQLIPRGTDATYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPVPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQADVYYQDPRGAA
PPFEPAPYQQGMYYTTPPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQMEGYYP
VAPHPTQIRPSYMRDPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPTFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGGGPMQAMA
PQGAPTKPINISDYSPYGTHGGWGGSPYSPHQNIPSQGHFSERERLSMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREVNTLAGQSQPPPPPPKWPGMIS
SEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLTL
TFSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRVGVTPTSAP
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctctcctgcccgatttgcactcagacc
tttgatgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataagctccaccgcaaggcttgcccctttgaccagaccactatcaacacagac
attgagctcctccccgtgaactcagctctgctgcagctagtgggtgctcaggtcccggag
cagccccccattactttgtgtagtggggttgaagatacaaagcattatgaggaagccaag
aaatgtgtagaagagttagcattgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaatagcactactcagagtgttctgagtcgcccaatgcagaggaagctggtgactctg
gtccactgccaactagtggaagaagaaggcaggattcgtgctatgagagcagctcgatct
ttaggtgaacgaacagttacagagctcattcttcagcaccagaatcctcagcaactctcc
tctaatctttgggcagcagtcagggctaggggctgccagttccttggaccagcaatgcag
gaggaagctttaaagctggttctcctggccttggaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttggagccgcggtttcctcaggcctctaaaact
agcattgggcatgttgtccagctcctttatagagcttcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctaaaagaagaatttagaacctatgaagctttgcgg
cgagaacatgactcccagatagtgcaaattgccatggaagcaggcttacgaattgcacca
gaccaatggtcctctttactttatggagaccagtctcacaagtctcatatgcagtcaatt
attgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaactaacaattgct
ctccagcgaactggagatccagcaaatttgaaccgactaagaccccatttggagctattg
gcaaacattgaccctagtccagatgctcctcctcctacttgggagcagctggaaaatgga
ctggttgctgtgcggactgtggtacatgggctagtagactatatccagaaccatagcaaa
aagggagcagatcaacagcagcctccacagcatagcaaatataaaacatacatgtgtcga
gatatgaagcagaggggaggatgccctcgtggggccagctgtacgtttgcacactcacag
gaggaactggagaagtttcgtaaaatgaacaaacgcctagttcccagaagacccctcagt
gcctctttgggtcaacttaatgaggtgggcctgccttcagcagctgtccttccagatgaa
ggtgcagtggatctgcctagcagaaaaacccctgctctgccaaatggaattgtatcagca
gggaatacggtaacacagctgattccccgagggacagacgccacctacgattctagcctc
aagccaggaaagatagatcatctgagcagtagtgcccctggatcccctcctgacctgcta
gaatctgtccctaagagtatttctgccttacctgtgaatccacatcctgtacctccaagg
gggccaacagatttgcctcctatgcctgtcaccaaaccacttcagatggtaccacgaggt
tctcagttatacccagcacaacaggcagatgtttattatcaggatcctcgaggagctgcg
ccaccatttgaaccagcaccttatcagcagggtatgtactatactacaccaccacagtgt
gtatctcgctttgtcagacctccaccgtctgctcctgaacctggtcctccctacttggat
cattatccaccctatctccaagatcgtgtagtaaactctcagtatggcacacagccacaa
caatacccacctatgtacccaccacactatgatggccgccgagtataccctgctcagtct
tacacaagagaggagattttccgagaaagtcctatacccattgagattccacctgcagca
gtaccatcctatgtaccagaatccagagaaagataccaacagatggagggttactatcca
gtggctcctcatccaactcagatcagaccttcgtacatgagagaccctccgtatagccgg
cttcctcctcctcctcagccccatcctagtctagatgagctacatcgcagacgaaaggaa
ataatggcccagctcgaggaaaggaaggttatctctccacctccttttgcaccttcacca
acattgcctcctacctttcatcaagaggaatttttggatgaagacttgaaggtagctggg
aaatacaaaggaaatgattatagccagtattctccctggtcatgcgacaccatcggctcc
tacattggaaccaaagatgcaaaacccaaagatgtggtggcagcagggagtgtggaaatg
atgaatgtggagagtaaaggaatgagagatcaacgactggatcttcagagaagagctgca
gaaaccagtgatgatgaccttatcccatttggagaccgaccaactgtatcgcggtttggt
gccatctctcgaacctccaaaacaatatatcagggtggtggtccaatgcaggctatggca
cctcagggagctcccacaaaacctattaatatttcagattatagtccatatggaacccac
ggtggctggggaggatctccatattcacctcatcaaaacataccttctcagggacacttc
agtgagagggagagactgtccatgtcagaagtggccagtcatggaaaaccccttccgtct
gctgagagggaacagctacgattggaattgcaacaactaaaccatcaaatcagccaacag
actcagctccgtggactagaggctgttagtaacaggctggtgttgcagagggaggtgaac
accctggcaggccagtcacagcccccaccaccacctccaaaatggcctggaatgatttca
agtgagcagttgagcttggaactgcaccaggtggaaagggaaatcgggaagagaacccgg
gaactgagtatggagaaccagtgttctctggacatgaaaagcaaattgaatacaagcaag
caagccgaaaacggacaaccagaaccacaaaataaggttccagctgaggaccttacattg
acatttagtgatgtaccaaatggctcagcgttgacacaagagaatatcagcctcctgtca
aacaagaccagctctctgaacctgtcagaggaccccgagggaggaggtgacaacaatgac
tcccagagagtgggagtcacacccacttctgctccctaa
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integrated database retrieval system
