Mirounga leonina (Southern elephant seal): 118015428
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Entry
118015428 CDS
T07472
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain
KO
K16630
collagen type XXII alpha
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118015428 (COL22A1)
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Paralog
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Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
118015428
NCBI-ProteinID:
XP_034868164
LinkDB
All DBs
Position
Unknown
AA seq
1612 aa
AA seq
DB search
MRAPERGRAVAGLRGDATACLLWLLLLWHWDPGCQAQRAGCKTVHYDLVFLLDTSSSVGK
EDFEKVRQWVANLVDTFEVGPDRTRVGVVRYSDQPTTAFELGLFGSREAVKAAARHLAYH
GGNTNTGDALRFITRHSFSPQAGGRPGDHAFKQVAILLTDGRSQDLVLDAAAAAHRAGIR
IFAVGVGEALKEELEEIASEPKSAHVFHVSDFNAIDKIRGKLRRRLCENVLCPSVRVEGD
RFKHTNGETKEITGFDLMDLFSVKEILGRRENGMQSSYVRMGSFPVVQRTEDVFPEGLPD
EYAFVTTFRFRKMSRKEDWYIWQVIDQYGIPQVSIRLDGENKAVEYDAVGAVKDAVRVIF
RGPRVSDLFDRDWHKIALSIQAQNVSLYADCALVQTLPIEERENIDIQGKTVIGKRLYDS
VPIDFDLQQIVIYCDSRHAELETCCDIPLGPCQVTVLTETSLLPQQPPTSGSEQIGFLKT
INCSCPAGEKGEKGSDGPMGLPGPKGDMGATGLVGAPGPKGEKGDMGRGPFVQGEKGEKG
SLGLPGPPGRDGSKGMRGEPGEPGLPGEVGTRGFQGPPGLPGPPGHVGAPGLQGERGEKG
ARGEKGERGPDGFPGKHGETGEQGRPGLPGVAGPQGEKGDVGPAGPPGVPGSVVQREGLK
GEQGAPGPRGHQGLPGPPGAPGLMGPGGKDGPPGLQGLRGRKGEVGPPGTPGLLGPQGPP
GPPGVPGPPGPGGPPGLPGEIGFPGKPGHPGPTGPPGKDGQHGAPGLPGPKGQPGERGEG
GLPGKPGPRGEVGEQGLAGRPGEKGEAGLPGAPGFPGMRGEKGERGEKGTLGLPGLKGDP
GEKGEAGPAGPPGLPGTTSLFTPHSRMPGEQGPKGEKGDPGVPGEPGSQGHPGELGPRGP
TGAPGAKGQEGPRGAPGTAGNPGSPGTAGPPGAGGPPGSAGSPGIRGPPGKDGERGEKGA
AGEEGSPGPAGPRGDPGAPGLPGAPGAPGQGKDGEPGLRGPPGLPGPLGIKGDQGAPGIP
GSPGNRGDPGIGVDGPPGPSGPPGDKGPPGSRGLPGFPGPQGPAGQDGVPGNPGERGPPG
KPGPASLLSPGDINLFKDICSDCPPGPQGLPGLPGFKGDKGLPGKPGREGTEGKKGDAGP
RGLPGPPGIAGPQGSKGERGADGEIGQKGDQGHPGVPGFMGPPGNPGPRGADGIAGAAGP
PGIQGPPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKMGEPGLPGLEGARGP
PGFKGRTGDSGAPGPRGEPGAVGPPGREGSPGKDGDSGPTGPQGPQGLRGPPGKNGSPGS
PGDPGPTGSPGQKGNQGDHGNPGLPGFLGPRGPQGEPGEKGVPGKEGAPGKPGEPGAKGD
RGDPGNKGDKGPPGGKGQPGDPGIPGHKGYTGLMGPQGPPGENGLAGPPGPPGQPGFPGL
RGESPSMDTLRRLIQEELEKQLGTRLAYLLAQRPPVHVKASQGRPGPPGPPGKDGLPGRA
GPIGEPGQPGQGGLEGPSGPVGPKGERGAKGDPGAPGVGLRGEMGLPGIPGQPGEPGYAK
DGLPGAPGPQGETGPSGHPGPPGPPGPPGQCDPSQCAYFASLAVQPANVKGP
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctcccgagcgcgggagagccgtggcgggcctgcgaggcgacgccacggcctgc
cttctgtggttgctgctgctgtggcattgggaccccggctgccaggcccagagggcaggt
tgcaagactgtccactacgacctggtcttcctcttggacacctcctccagcgtgggcaag
gaggactttgagaaggtccggcagtgggtggccaacctggtggacaccttcgaggtgggc
cctgaccgcacgcgcgtgggggtcgtgcgctacagcgaccagcccaccacggccttcgag
ctgggcctgttcggctcgcgggaggcagtcaaggcggcggctcggcacctggcctaccac
ggcgggaacaccaacacgggcgacgcgctgcgcttcatcacacgccacagcttttccccg
caggccggcggccgcccgggggaccatgccttcaagcaggtggccatcctcctgaccgac
ggccgcagccaggacctggtgctggacgctgcagctgccgcccaccgtgcgggcatccgc
atcttcgccgttggcgtcggggaggcgctcaaggaggagctggaggagatcgcttcggag
cccaagtccgcccacgtcttccacgtgtccgacttcaacgccatcgacaagatccgtggc
aagctgagacgccgcctgtgtgagaacgtgctgtgccccagcgtccgagtggaaggagac
cgctttaagcacaccaacggtgaaaccaaggaaatcacaggttttgacctgatggatctg
ttcagtgtgaaggagatcctggggaggagagagaacgggatgcagagctcctatgtccgg
atgggatccttccctgtggtgcagaggacagaggatgtgttccccgaaggtttgcctgat
gagtacgcttttgtcaccaccttccgcttccggaagatgtctcggaaagaagactggtat
atctggcaggtcatcgaccagtatgggatcccgcaggtctccatccggctggacggcgag
aacaaggcagtcgagtatgatgccgtgggtgccgtgaaggatgctgtcagggtgatcttc
cgaggcccccgggtcagtgacctctttgaccgggactggcacaagatcgccctgagcatc
caggcccagaacgtttccttgtacgccgactgtgcgctggtgcagacgctgcccatcgag
gagagggagaacatcgacatccaggggaagacggtgatcggcaagcgcctttacgacagc
gtgcccatcgattttgacctgcagcagattgtgatttattgtgactccagacacgcagaa
ttggagacttgctgtgatatccccttgggcccgtgccaggtgaccgtgctgacggagact
tcactcctgccccagcagcctcccacttccggcagtgaacagatcgggtttttgaagacc
atcaactgctcctgcccggctggagaaaagggcgaaaagggctctgatggccccatggga
ctccccggcccaaagggagacatgggagccactgggctggttggagctcctggacccaag
ggagaaaaaggtgacatgggcagagggccttttgtccaaggagagaagggtgaaaagggt
tccctgggcctgcccggtccccctgggagagacggcagcaaaggcatgcggggggaacca
ggagagccggggctgcctggtgaggtgggcacgcggggattccaaggaccacctggactc
cccgggcctcctggacacgttggagctcctggtctccaaggagaacgcggtgaaaaggga
gcccgaggagaaaagggggagcgaggcccggatggattccccgggaagcatggggagacg
ggagagcaggggagacctggccttcctggcgtggcaggaccccagggagagaagggtgac
gtggggcctgcaggacctcctggtgtaccgggctccgtggtgcagagagagggcctgaaa
ggcgagcagggagctccaggaccacggggtcaccagggcctacctgggccaccaggagct
ccgggtctgatgggtcctggaggcaaggacggacctcctggtttgcaaggtctccggggg
aggaaaggtgaagtgggcccgccgggaacccctggattgctggggccacagggccctcca
ggaccacctggcgtcccaggcccccctggacccggaggccccccgggtttacctggagag
atcggcttcccaggaaaacctgggcaccccgggccaacgggcccacctggaaaggatggg
cagcatggagcaccaggcctgccgggacccaagggccagccaggagagagaggagaaggc
ggtctgcctggaaaacctggccctaggggagaagttggggagcagggcctggcgggccga
cctggagagaagggagaggctggtctcccgggagctccaggattcccgggcatgagggga
gagaaaggagagcggggagagaaaggcacactgggcctcccaggactgaaaggtgaccca
ggtgaaaagggtgaagctggtcctgcaggcccccctggattacccggaactacgtccctg
ttcacaccacactcaaggatgccaggagaacaagggccaaaaggagagaagggtgatccc
ggcgtgcctggggaaccgggatcccagggccatcctggagaactggggcctcggggaccc
actggagcgccgggtgccaagggacaagaaggcccacgtggggcacctggaacagctgga
aaccctggcagtcctggaactgcgggcccacctggtgccggcggccccccaggaagtgcg
ggctcccctggcatcagagggccccctgggaaagacggggagcgtggagagaagggagcg
gcaggtgaagaagggagtccaggaccagctggtcccaggggtgatcccggggctcccggg
ctccctggagcacctggagcacctggacagggaaaggacggagagccggggcttcgtggg
ccacctggattacctggacctctaggaatcaagggggaccaaggtgcacctgggatccct
ggctctcctggcaaccgtggtgacccgggcatcggggtggatggccctcctggcccttct
ggaccaccaggagacaaagggcccccgggatcccgaggcttacctggattccctggcccc
cagggacccgccggccaggatggcgtaccaggaaatccaggagaaagagggcctcctggc
aagccaggccccgcttcactactgtctccaggggacataaatctctttaaggacatatgc
agtgactgccctcctggtccccagggcctccctggtctgccaggttttaaaggggacaaa
ggtctcccaggaaagccagggagagaaggcacagaagggaaaaagggagatgctgggccc
aggggcctcccagggcctccaggaatagccggaccacagggaagtaaaggggaacgtggt
gcagatggtgaaattggacagaaaggtgatcagggtcatcctggagttcctggtttcatg
gggcccccagggaaccctgggccacggggagcagacggaattgctggagctgctggccct
ccaggaatccaagggccgccggggaaagaaggtcctcctggcccccaaggtccatctgga
ttacccggaatcccaggagaagaagggaaagagggcagagatggaaaaccaggtccccct
ggcgagccgggcaaaatgggagagcctggtctgccaggactggagggagcccgaggccca
cctggcttcaaaggacgcaccggcgactctggcgcacccggtccccggggagagcctggt
gccgtggggccccctggccgggaagggtcacccggaaaagatggtgattctggacccaca
gggccacagggtccccaaggactgagggggcccccgggtaagaatggatcaccgggatct
ccaggagaccctggccccacaggaagtcctggccagaaggggaaccaaggagaccacggc
aacccaggactccctggctttctgggtccccgggggccccagggagagccaggagagaag
ggagtcccaggcaaggagggagcccccgggaagcccggagagccaggagccaaaggagac
aggggagatcccgggaacaaaggtgacaaaggacctcctggtggaaagggccagcctggg
gaccctggaatccctggtcacaaaggctacacgggcctgatgggcccccaaggacctccc
ggggagaatggactggctgggcccccggggcctccgggccagccaggatttccaggactg
aggggggagtccccctccatggacaccctgcgacggctcatccaagaagagctagagaaa
cagctgggaaccagactcgcctatctcctggcccagaggcccccagtgcatgtgaaggca
tctcaaggccgacccgggcccccggggccccctggaaaagatgggcttccgggccgggcg
ggccccatcggggagccaggacagcccgggcaggggggtctggaaggaccctctggacca
gtgggtcccaaaggtgagcgaggagccaaaggagacccaggtgcacctggcgttggcctc
cgaggcgagatgggcctgcccggcatcccaggtcaacccggggaacctggctatgcaaaa
gacgggctccccggggctcccggccctcaaggggagacaggaccatcaggacaccccgga
cccccaggcccgcccgggccccctggccagtgtgacccctcccaatgtgcctacttcgcc
agcctcgctgtccagcccgctaacgtgaagggcccctag
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integrated database retrieval system
