Mirounga leonina (Southern elephant seal): 118015744
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Entry
118015744 CDS
T07472
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118015744 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118015744 (CSTF3)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
118015744 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
118015744
NCBI-ProteinID:
XP_034868424
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MSGDGAPEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNAVLTKAVKRPNEDSDDDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacggcgccccggagcaggcagctgagtatgtcccagagaaggtgaagaaa
gccgaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactatacattgaagcagagataaaagctaaaaat
tatgacaaggttgaaaagctatttcagagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatatgttcgagaaaccaagggtaaactgccaagttacaaagaa
aaaatggctcaagcatatgactttgcactagataaaattggaatggaaattatgtcttat
cagatttgggtggattacatcaatttcttaaaaggcgtggaagctgttggatcttacgca
gaaaatcagagaataacagctgtccgaagagtttatcaacgaggttgtgttaatccaatg
atcaacattgaacaactctggagagactataacaagtatgaagagggtatcaatattcat
ttagctaaaaaaatgattgaagatcggagtcgagattacatgaatgctaggcgtgtagca
aaggaatatgagacagtaatgaaaggtttggaccgcaatgctccctcagtgcctcctcag
aatactccccaagaagcccagcaggtggatatgtggaagaaatacatacagtgggaaaag
agcaaccctcttcgtacagaagatcagacgcttatcacaaaaagagttatgtttgcttat
gaacagtgcctgcttgtactgggccatcaccctgatatttggtatgaagccgcccagtat
cttgaacagtcaagtaaactgcttgcggaaaagggggatatgaataatgccaaattattt
agtgatgaagctgctaatatatatgaaagagccataagcactttattaaagaagaatatg
cttctttattttgcatatgcagattatgaagagagtcgcatgaaatatgagaaagttcac
agtatatataacagacttctggcaattgaggatattgaccccaccttggtatatatccaa
tatatgaaatttgcaagaagagcagaaggtatcaaatctggaagaatgatatttaaaaaa
gcaagagaagataccagaacccgccaccatgtctatgttactgcagcactcatggagtat
tactgtagtaaggacaaatctgttgcctttaagatttttgagctgggtctaaagaaatat
ggagacattccagaatatgtcttggcctatattgactatctttctcacctcaatgaggac
aataatacccgagttttgtttgaacgagtcttaacttctggaagccttcctcctgagaag
tctggagaaatctgggcccgatttctagctttcgaaagtaacattggtgatctagctagc
atactcaaagtggagaaaagacggtttacagcattcaaagaagagtatgaaggcaaagaa
acagctttactggtggacagatataagttcatggacttatatccttgctcggcgagtgaa
ctaaaagcgcttggttataaggatgtctcccgtgctaagctagcagctataattccagac
ccagttgtagctccttccatagtgcctgttctgaaagatgaagtggatagaaaaccagag
taccccaaaccagacactcagcagatgattccatttcagccacgacatttagcaccaccc
ggcttacaccctgttcccgggggcgtgttcccagtgccgcctgcagccgtcgttctaatg
aaacttctccctcctcccatctgcttccagggtccttttgtacaagtggatgaactgatg
gaaattttccgaagatgcaagataccaaatactgttgaggaagctgttcggatcatcacg
ggcggcgccccggagctggccgtcgaggggaacggcccggtggagagcaacgccgtactc
accaaggcggtcaagaggcccaacgaggattccgatgacgatgaagaaaagggagctgtc
gtcccccctgttcatgacatctaccgagcgcggcagcagaagcgaattcggtga
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