KEGG   Mirounga leonina (Southern elephant seal): 118015863
Entry
118015863         CDS       T07472                                 
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
  KO
K13133  gem associated protein 5
Organism
mlx  Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:mlx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlx03019]
    118015863 (GEMIN5)
   03041 Spliceosome [BR:mlx03041]
    118015863 (GEMIN5)
Messenger RNA biogenesis [BR:mlx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     118015863 (GEMIN5)
   mRNA cycle factors
    P-body specific factors
     118015863 (GEMIN5)
Spliceosome [BR:mlx03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    118015863 (GEMIN5)
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_RIG_2nd Beta-prop_WDR5 WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_RIG_1st Beta-prop_IFT140_1st Beta-prop_Aladin WD40_Gbeta Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_EIPR1 MIOS_WD40 NBCH_WD40 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_Nup120_160 Tricorn_2nd Beta-prop_SCAP
Other DBs
NCBI-GeneID: 118015863
NCBI-ProteinID: XP_034868779
LinkDB
Position
Unknown
AA seq 1509 aa
MGQEPRTLPPSPNWYCARCSDAVPGGLFGFAARTSVFLVRVGPSAGAIPGTPPFRVIGEL
VGHTERVSGFTFSHYPGQYNLCATSSDDGTVKIWDVETRTVVTEHALHQHTISALHWSPQ
VKDLIVSGDEKGVVFCYWLNRNDSQHLFIEPRTIFCLTCSPHHEDLVAIGYKDGIVVIID
ISKKGEVVHRLRGHDDEIHSIAWCPLLGEDCLSINQEENSEELEIPNGKVIAQTAVTKGC
YLATGSKDQTIRIWSCSRGRGVMILKLPFLKRRGGGIDPTVKERLWLTLHWPKDQPTQLV
SSCFGGELLLWDLTQSWRRKYTLFSASSEGQNHSRIVFNLCPLQTEDDKQLLLSTSMDRD
VKCWDMATLECCWTLPSLGGFAYSLAFSPVDMGCLAIGVGDGMIRVWNTLSIKNNYDVKN
FWQGVKSKVTALCWHPTKEGCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGP
PLPPISLGGEGDRPSLTLYSCGGEGIVLQHNPWKLGGEAYDINKLIRDTNSIKYKLPVHT
EISWKADGKIMALGNEDGSIEIFQVPSLKLICTIQQHHKLVNTISWHHEHGSQPELSYLM
ASGSNNAVIYVHNLKTVIESNPESPVTITEPYRTLSGHTAKITSVAWSPHHDGRLVSASY
DGTAQVWDTLREEPLCNFRGHRGRLLCVAWSPLDPDCIYSGADDFCVYKWLTSMQEHSRP
PQGKKSIELEKKRLSQPKPKPKKKKKPTSRAPVKQEGYDGNEDESIRESSGPVENGVSDQ
EGEEEAREPEFPSGIVSVASREPVTCTPVSLGFEKSKVTVNNKVTLLKKEPPKEKPESLT
KKRKARSMLPLTTSLDHRSKEELHQDCLVLATAKHSKAELNEEVCTDLEERFHLGLFTDR
AALYRMIEVEGKGHLENGHPELFHQLMLWKGDLKGVLQTAAERGELTDSLVAMAPVAGYH
VWLWAVEAFAKQLCFQDQYVKAASHLLSIHKVYEAVELLKSNHFYREAISVAKARLRPED
PILKDLYLTWGAILEKDGHYAVAAKCYLGAASAYDAAKVLAKKGDAASLKTAAELASIVG
ENELSSSLALRCAQELLLARNWVGAQEALKLHESLKGQRLVFCLLELLSKHLEERQLSEA
RSSSYNAWAAGTEGPFVERVTAVWKSTFSLDSPEQYQAALQQLQSIQYPSATNNTPSKQL
LLHICHDLTLAVLSQQVACWDAAVEALLRAVVRSYDSGNFTIMQEVHSAFLPEGCDHLRD
KLGEHQSPTTPAFKSLEAFFIYGHLYEFWWSLSRPCPKSSVWVRAAHRRTTSVEQSQQIN
NASPEETDPKVSQPETSRPPELDVRLTEESEQMLITCKELFSEKHASLQNSQRTVAEVQE
TLAEMIRQHQKSQVCKSTTNGPDKNESEQVAEKSLSSPPSECKEEKNQPLSLPELTKRLT
EANEKIAKFPESVKTWPFPDVLECCLILLHIGSQCPGSVTQDMQQQAQELLQKYGNTKVY
KRYCQTFCT
NT seq 4530 nt   +upstreamnt  +downstreamnt
atgggacaggagccgcgcacgctgccgccttctcctaactggtactgcgcccgatgcagc
gatgccgtgcccgggggccttttcggcttcgcagcgcggacctccgtcttccttgtccgc
gtgggcccgagcgccggcgcgatccctgggacgcccccatttcgagtcataggggagttg
gtgggacacaccgaaagggtctctggcttcaccttttctcattacccgggtcaatacaac
ctctgtgccaccagctctgatgatggaactgtgaaaatctgggatgtagagacaagaaca
gtcgtgacagaacatgcactccatcagcatacaatatcagcattgcattggtctcctcaa
gtaaaggatttaatagtatctggagatgaaaaaggagtagttttctgttactggcttaac
agaaatgacagccagcacctctttatagaacccaggacaattttctgtcttacttgctca
cctcatcatgaagatttagtagccattggctacaaggatggcatagtggttataattgac
atcagtaagaaaggagaagttgttcacaggcttcgaggccatgatgatgaaatccactcc
atagcctggtgtcccctgcttggtgaagactgtttatccatcaatcaagaggaaaattca
gaagaacttgaaattcccaacggtaaagttatagcacaaactgcagtaacaaaaggctgc
tacttagccactggaagcaaagatcagaccattcgaatctggagctgctctagaggccga
ggggtgatgattttgaaattaccctttctgaagagaagaggagggggtatagacccaact
gttaaagaacgcctttggttgacactccattggcccaaggatcaaccaacacagctggta
tccagctgttttggaggcgagctgttgctgtgggatctcactcagtcttggagacggaaa
tataccctttttagtgcctcatcagaagggcagaatcattcaagaattgtatttaattta
tgtcctttacaaactgaggatgacaaacagctgctgctctccacatcaatggatagagat
gtaaaatgttgggacatggccacccttgagtgctgctggaccctgccttccctcggtggg
tttgcctatagcctggctttctctcctgtggacatgggctgtttggccataggcgttggg
gatggcatgatccgcgtatggaatacactctccatcaagaacaactatgatgtgaaaaat
ttttggcagggtgtcaagtccaaggttacagcgctgtgctggcacccaaccaaggaaggc
tgcttagcttttggcactgatgacgggaaggtgggattgtacgacacctactccaacaaa
cctccacagatttctagcacatatcataagaagactgtatacactttagcctgggggcca
ccactaccccccatttcactcggaggagaaggagacagaccttccctcactttatacagc
tgtggaggggaagggattgtcttacagcataacccctggaagcttggtggagaggcctat
gatatcaacaaactcatcagggacaccaattcaatcaaatacaaattgcctgtacacaca
gagatcagctggaaagcagatggcaaaatcatggctcttggcaacgaagacggatcaata
gaaatatttcaggttcccagcctgaaactgatatgcaccatccagcagcatcacaagctt
gtgaataccattagctggcatcatgagcatggcagtcagccggagctgagctatctgatg
gcctctgggtccaacaatgcagtcatttatgtgcacaacctaaagactgtcatagagagc
aatcctgaatctccagtgaccattacagagccctaccggaccctgtcagggcacacagcc
aagattaccagtgtggcatggagcccacatcatgatggaaggctggtatctgcttcctac
gatggtacagctcaggtgtgggatactctccgagaagagcctctttgcaatttccgagga
catcgaggtcgacttctttgtgtggcatggtccccactggatccagactgcatctactca
ggggcagatgacttctgtgtgtacaaatggctcacttccatgcaagaacattcccggcct
cctcaaggtaagaaaagtattgaattagagaaaaaaaggctctctcaacctaagccaaag
cccaaaaagaagaaaaagcccacctcgagagctcctgtaaagcaggaaggatatgatgga
aatgaagacgagagcatcagggagagctcgggacctgttgagaatggcgtgtcggaccag
gagggtgaggaggaagcccgggagccagagttccccagtggcattgtctcagtggcttct
agagaaccagttacctgcactccggtttcgttaggctttgaaaagtcaaaggtcactgtt
aacaacaaagtcactttactgaagaaggagccacctaaagagaagccagaatccttaacc
aagaagcgaaaagctcgttccatgcttccactgactaccagcctggaccacaggtccaag
gaggagcttcatcaggactgtttggtattagcaactgcaaaacactccaaagcagagcta
aatgaggaggtgtgtactgatcttgaggaaagatttcacctggggcttttcacagaccgg
gctgccctgtacagaatgattgaggttgaaggaaaaggtcacttggaaaatggccacccc
gagttatttcaccagctcatgctttggaagggagatctaaaaggtgttcttcagacggca
gcagaaagaggggagctgacagacagtctggtggctatggcaccagttgctggctaccat
gtgtggctgtgggccgtggaagcttttgccaaacagctgtgttttcaagatcagtatgtc
aaggctgcctctcacctcctttctatccacaaagtgtatgaagctgtagagctgctcaag
tcaaaccatttctacagggaagctatttcagttgccaaggcccgactgcgcccagaggac
ccgatcctgaaggacctgtatctcacctggggagccatcctggaaaaagatggccattat
gctgtagccgccaaatgctatttaggggctgcttctgcctatgatgcagccaaagtcttg
gccaagaagggagatgcagcatcacttaagacggctgcagagttggcttccattgtagga
gagaatgagttgtcctcttccctggctctccgatgtgcccaggagctgcttttggccagg
aactgggtgggagcccaggaagccctgaagctgcatgaaagtctaaaggggcagagactg
gtgttttgccttcttgagctactgtccaagcacctggaggaaaggcagctttcagaggcc
agaagctcttcctacaacgcctgggctgcgggcactgaagggcccttcgtggagagggtg
actgctgtatggaagagtaccttcagcctggatagcccagagcagtatcaggcagcactg
cagcaactgcagagtatccagtacccatctgctacaaacaacactccctccaaacagctt
ctgcttcacatttgccatgacctgaccttggcagtgctgagccagcaggtggcctgctgg
gacgcggctgtggaagccctgcttcgagctgtggtccggagctatgactccggaaacttc
accatcatgcaggaagtgcactcagcctttcttcctgaaggctgtgaccatctaagagac
aaactaggtgaacatcagtcccccaccacaccagctttcaaaagtttggaggcctttttt
atttatggacatctgtatgaattctggtggtctctctccaggccttgccccaaatccagt
gtttgggtaagagctgctcacagaaggacaacctctgttgagcaaagccagcagataaac
aatgccagccctgaagaaacagaccccaaagtttctcagccagagacaagcaggcctcca
gaattagatgtgagactcacagaagaaagcgagcagatgctgatcacttgtaaagagctt
ttttcagaaaagcacgccagtctccaaaactcacagagaaccgttgccgaagtccaagag
accttggcagaaatgatccgccaacaccagaagagtcaagtctgtaagtctacaacaaat
ggtcctgataagaatgaatctgaacaggtggcagaaaagtccctctctagtcctccgagc
gagtgtaaagaagaaaaaaatcagccactttctctgcctgagttaaccaaaaggcttacg
gaggcaaatgagaaaatagctaaatttcctgagagtgttaagacctggcccttcccagat
gtgctggagtgctgccttatcctgcttcacatcgggtcccagtgtcctggcagcgtgacc
caggacatgcagcaacaggcccaagagctccttcagaaatacggcaacactaaagtttac
aaaagatactgccagaccttctgcacgtga

DBGET integrated database retrieval system