Mirounga leonina (Southern elephant seal): 118015911
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Entry
118015911 CDS
T07472
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03420
Nucleotide excision repair
mlx04120
Ubiquitin mediated proteolysis
mlx05161
Hepatitis B
mlx05170
Human immunodeficiency virus 1 infection
mlx05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118015911 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
118015911 (DDB1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
118015911 (DDB1)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
118015911 (DDB1)
05161 Hepatitis B
118015911 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mlx04121
]
118015911 (DDB1)
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118015911 (DDB1)
Ubiquitin system [BR:
mlx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
118015911 (DDB1)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
118015911 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
118015911 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Beta_propel
Motif
Other DBs
NCBI-GeneID:
118015911
NCBI-ProteinID:
XP_034868847
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVGEWKEPQGKNISVASCNCSQVVVAVGRALYYLQIRPQELRQISHTEMEHEVAC
LDITPLGDSSGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaactacgtggtaacggcacagaagcccaccgccgtgaacggctgcgtaacc
ggacactttacttcagctgaagacttgaacctgttgatcgccaaaaacacgagattagag
atctatgtggtcactgctgaggggcttcggcccgtcaaagaggtgggcatgtatgggaag
attgcagtcatggagcttttcaggcccaagggcgagagcaaggacctactgtttatcctg
acagctaaatacaatgcctgcatcctggagtataagcagagtggcgagagcattgatatc
ataacacgagcccatggcaatgtccaggaccgtattggccgcccctcggagacgggcatt
attggcatcatcgaccctgagtgccggatgattggcctgcgactctatgatggccttttc
aaggttattccgctagatcgggacaataaagagctcaaggcctttaacatccgcctcgag
gagctgcatgtcatcgacgtcaagtttctatatggttgccaagcacctaccatctgcttt
gtctaccaggaccctcaggggcggcacgtgaaaacctacgaggtatctctccgagagaag
gagttcaataagggcccttggaaacaggaaaacgtagaagctgaagcttccatggtgatt
gcagtcccagagcccttcggaggggccatcatcattggacaggaatccatcacctatcac
aatggtgacaagtacctggcaattgcccctcctatcatcaagcaaagcacgattgtgtgt
cacaatcgtgtggaccccaatggttcccgctatctgctgggagacatggaaggacggctc
ttcatgctgcttttggagaaggaggaacagatggatggcactgtcaccctcaaagatctc
cgtgtggagctcctcggagagacctctattgctgaatgcttgacatacctcgataacggt
gttgtgttcgttgggtctcgccttggggactcccagcttgtgaagctcaatgttgacagc
aatgaacaaggctcctatgtagtggccatggaaacgtttaccaatttaggacccatcgtg
gacatgtgcgtagtggacctggagaggcaggggcagggacagctggttacttgctctggg
gctttcaaggaaggttccttgaggatcatccggaacggaattggaatccatgagcatgcc
agcattgacttacccggcatcaaaggtctgtggccactgcgctctgaccctaaccgggag
actgatgacactctggtgctctcttttgtgggccaaacaagagttctcatgttaaacgga
gaagaggtggaagaaaccgaactgatgggtttcgtggatgatcagcagactttcttctgt
ggcaacgtggctcatcagcaactcatccagatcacttcagcatctgtgaggttggtctct
caggaacctaaggctctggtcggtgagtggaaggagcctcagggcaagaacatcagtgtg
gcctcctgcaactgcagccaggtggtggtggcggtgggaagggccctctactacctgcag
atccgtcctcaggagctccggcagatcagccacacagagatggaacatgaagtggcctgc
ttggacatcaccccactgggggacagcagtgggctgtcccctctttgtgccattggcctc
tggaccgacatctccgcgcgtatcttgaagctgccttcttttgagctactgcacaaagag
atgctgggtggagagatcattcctcgttccatcctgatgaccacttttgagagtagccac
tacctcctttgtgccttgggagatggggcgcttttctacttcgggctcaacattgagaca
ggcctgttgagcgaccgtaagaaggtgactctgggcacccagcccacggtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgtcccactgtcatctac
agcagcaaccacaaactggtcttctccaatgtcaacctcaaggaagtcaactacatgtgt
cccctcaactctgatggctatcctgacagcctggcactggccaacaacagcaccctcacc
atcggcaccatcgacgagatccagaagctgcacatccgcacggttcccctctacgagtct
cccaggaagatctgctatcaggaagtgtcccagtgctttggggtcctctccagccggatc
gaagtccaggacacgagtggcggcacaacggccctgaggcccagtgccagcacccaggcc
ctgtccagcagcgtcagctctagcaagctgttctccagcagcacagcaccgcacgagacc
tcctttggagaagaggtggaggtgcacaatctcctcatcatcgaccagcacaccttcgaa
gtgcttcatgcccaccagttcctgcagaatgaatatgccctcagcctggtctcctgcaag
ctgggcaaagaccccaacacgtacttcatcgtgggaacagccatggtgtatcctgaagag
gcggagcccaagcagggtcgaatcgtggtctttcagtattctgacggaaaactacagact
gtggccgagaaggaagtgaaaggagctgtgtactccatggtggagttcaacggcaagctc
ttagccagcatcaacagcacggtgcggctttatgagtggacaacagaaaaggagcttcgc
accgagtgcaatcactacaacaacatcatggccctctacctgaagaccaagggtgacttc
atcctggtgggcgacctgatgcgctcagtgctgctgcttgcctacaagcccatggagggg
aactttgaagagattgctcgagactttaatcctaactggatgagtgctgtggaaatcttg
gatgatgacaatttcctgggggctgaaaatgcctttaacttgtttgtgtgtcagaaggat
agcgctgccaccaccgacgaggagcggcaacacctccaggaggtcggtctcttccacctg
ggcgagttcgtcaacgtcttttgccacggctccctggtcatgcagaatctgggcgagacg
tccacccccacacagggctcggtgctcttcggcacagtcaacggcatgatcgggctggtg
acctcactgtcagagagctggtacaacctcctgctggacatgcagaatcgactcaataaa
gtcatcaagagtgtgggcaagatcgagcactccttctggagatcttttcatactgagcga
aagacagaaccagccacgggcttcatcgatggagacttgatcgagagtttcctggacatc
agccggcccaagatgcaggaggttgtggcaaacctgcagtatgatgatggcagcgggatg
aagcgagaggccacggcagatgacctgatcaaggttgtggaggagctgacgcggatccat
tag
DBGET
integrated database retrieval system
