Mirounga leonina (Southern elephant seal): 118016032
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Entry
118016032 CDS
T07472
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04120
Ubiquitin mediated proteolysis
mlx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118016032 (SYVN1)
04120 Ubiquitin mediated proteolysis
118016032 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mlx04121
]
118016032 (SYVN1)
Enzymes [BR:
mlx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118016032 (SYVN1)
Ubiquitin system [BR:
mlx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118016032 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
U-box_ZFPL1
zf-HC5HC2H
zf-C3H2C3
zf-Nse
zf-RING_Vps41
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
118016032
NCBI-ProteinID:
XP_034869088
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPPPPEPADQGPPPAAHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAAALSRPSGA
ASAAASAASASAPGPGSAPAPEAGPTPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLT
PEELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVSPTEE
TAPAVVPAAPPTSISSSETTTPPPGVSPPAPEPEKPPAPESVGMEELPEDGEPDAAELRR
RRLQKLESPVAH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgaccggggccgtggtggct
catgcctactacctcaagcaccagttctaccccactgtggtgtacttgaccaagtccagc
cccagcatggcagtcctctacatccaggcctttgtccttgtctttctcttgggcaaagtg
atgggcaaggtgttctttggacagttgagggcagcagagatggagcaccttctggaacgt
tcctggtacgctgtcactgagacttgtctggccttcaccgtctttcgggacgacttcagc
ccccgctttgttgcactcttcactctccttctcttcctcaagtgttttcactggctggct
gaggaccgtgtggactttatggaacgcagccccaatatctcctggctctttcactgccgc
attgtctcccttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtatgccatc
ctgatgactatggtgctcaccatcttcatcaagtatgtactgcactctgtggacctccag
agcgagaacccctgggacaataaggccgtgtacatgctctacacggagctgtttacaggc
ttcatcaaggttttgctctacatggccttcatgactatcatgatcaaggtgcacaccttc
cctctctttgccatccggcctatgtacctggccatgaggcagttcaagaaggctgtgacg
gatgccatcatgtctcgccgagccatccgcaacatgaacacactgtatccagatgccacc
ccagaggaactccaggcaatggacaatgtctgcatcatctgccgagaagagatggtgact
ggtgccaagaggctgccctgcaaccacattttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgccctacctgccgtatggatgtcctccgggcatcactgccgacc
cagtcaccaccgcccccagaacctgcggatcaagggccaccgccagccgctcacccccca
ccactcctgccgcagccccccaacttcccccagggcctcctgcctccctttcctccaggc
atgttcccgctatggccccccatgggccccttcccacctgtcccacctccccccagctca
ggagaggctgtggcccctccatccactagtgcagcagccctttctcggcccagtggagca
gccagcgctgctgcttctgcagcctctgcctcggcccccggccctggctccgccccggcc
cctgaggctggccccaccccgggcttccccttcccgcccccctggatgggcatgccgctg
cctccaccttttgccttccccccaatgcccgtgccccctgcgggctttgccgggctgacc
ccggaggagctgcgggctctggaaggccacgagcgacagcacctggaggctcggctgcag
agcctgcgcaacatccacacgctgctggacgccgccatgctgcagatcaaccagtacctc
accgtgctcgcctccttggggcccccccggcctgccacctcagtcagccccactgaggag
actgcccctgcagttgtccctgctgccccccccaccagcatctccagctctgagaccacc
accccacccccaggagtctccccaccagcccctgagcctgaaaagcctccagctcctgag
tcagttggcatggaggagctgcctgaggatggggagcccgatgcagcagagctccgtcgc
cgccgcctgcaaaagttggagtcccccgtcgcccactga
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