Mirounga leonina (Southern elephant seal): 118016622
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Entry
118016622 CDS
T07472
Symbol
RAD50
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03440
Homologous recombination
mlx03450
Non-homologous end-joining
mlx04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118016622 (RAD50)
03450 Non-homologous end-joining
118016622 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118016622 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlx03032
]
118016622 (RAD50)
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118016622 (RAD50)
DNA replication proteins [BR:
mlx03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
118016622 (RAD50)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
118016622 (RAD50)
BRCA1-C complex
118016622 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
118016622 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
118016622
NCBI-ProteinID:
XP_034869993
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSVSSKCAEIDREMISSLGVSRSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QELIQARDSLIQSLATQLELDGFERGPFNERHIKNFHKLVRERQEREAEIASQLMNDFTE
KETLKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELRNVKYELQQLEGSSDRILELDQE
LSKAERELSKAEKNSNVEALKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPVRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEDSAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD
TVSSKMELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LFREIKDAKEQLSPLETTLEKFQQEKEELINKKNKSNKIAQDKMNDIKEKVKNIHGYMKD
IENYIQDGKDDYXKQKENELNKVIAQLSECERHKENINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDSIKRNHSLAIGRQRG
YEEEITHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLSYVH
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattttgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcacttttttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcagtttcgtgatgtcaatggagaacttatagctgtacagaggtctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtgtcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaggtctgtgctaaataatgtcattttttgtcaccaagaa
gactctaattggcctttaagtgaaggaaaggctctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacataaaagccttggaaacactgcggcaggtacgacagacacagggt
cagaaagtaaaagaatgtcaaacagaactaaaatatttgaagcaaaataaggaaaaagct
tgtgagatacgtgaccagattactagtaaggaagcccagttaacatcatcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagacttgacaatgaaattaaagccttggatagccggaagaag
caaatggagaaagataatagtgaactggaacagaaaatggagaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccaaagaacagtaagggagaaagaaagg
agactggtagactgtcagcgtgaactggaaaagttaaataaagaatcaaggcttctcaat
caggaaaaatcagaactgcttgttgagcagggtcgtctgcagctacaagcggatcgccat
caagaacttatccaagcgagagattcattaattcagtctttggcaacacagctagaatta
gatggctttgagcgtggaccattcaatgaaagacatattaaaaattttcacaaacttgtg
agagagaggcaagaaagggaagcagaaattgccagccagctgatgaatgactttacagaa
aaagagactctgaaacaaaaacagatagatgagataagggataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaactaagaagcagaatgagctgagaaatgtg
aagtatgaattacagcagttggaaggatcttcggacaggattcttgaactggaccaggag
ctctcaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaagctcta
aaaacagaagtaataagtcttcaaaatgagaaagcagacctagacaggaccctgcgtaag
ttggaccaggagatggaacagttaaaccatcatacaacaacacgcacccagatggagatg
ctgaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctcgacacagt
gatgaattaacttcattgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaagaa
ctagcttcagctgagcaaaataaaaatcatataaataatgaactaaaaaggaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagt
gatttagacaggcttaaagaagaaattgaaaaatcctcaaaacagcgagccatgctggct
ggagccacagcagtatactcccaattcattactcagctaacagatgaaaaccaatcatgt
tgccctgtctgtcagagggtttttcagacagaagctgaattacaggaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactgaagtcaacagaatctgaactaaag
aaaaaagaaaaacggcgtgacgaaatgctgggacttgtccccgtgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgcttaaagaatgacatagaggaacaggaaacactcttgggcacaataatgcct
gaagaagacagtgctaaagtctgcctgacggatgttacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaaactgcaaggactagat
ttggatagaactgttcaacaagtaaaccaggaaaaacaagaaaagcaacacaaattagat
acagtttccagtaagatggaattgaatcgtaagcttatacaggaccagcaggaacagatt
caacacctaaaaagtacaacaaatgaacttaaatcagagaaacttcagatatctactaat
ttacaacgtcgtcagcagctagaggagcagactgtggaattatccactgaagttcagtcc
ttattcagagagataaaggatgctaaagagcagttaagccctttggaaacaacattggag
aagttccagcaggaaaaagaagaattaatcaacaaaaaaaataaaagcaacaaaatagcc
caggataaaatgaatgatatcaaagaaaaggttaaaaatattcatggttatatgaaagac
attgagaattatattcaggatgggaaagatgactattagaagcaaaaagaaaatgaactt
aataaagtaatagctcaactaagtgaatgcgagagacacaaagaaaatataaataaagaa
atgggaatcatgagacaagatattgatacacagaagatacaagagagatggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggttttacaaatgaagaatgaacatcagaagttg
gaagaaaaaatagacagtataaaaagaaatcacagtttggcaatagggcgacagagaggc
tatgaggaagaaattactcattttaagagagaacttcgagaacctcaatttcgggatgcg
gaggaaaagtacagggaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgatcaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtccgatgccgatgaaaatgtatcagcctctgataaaaggcgg
aactataactaccgcgtggtgatgctaaagggagacacagccttggatatgcgaggacga
tgcagtgctggacaaaaggtattagcctcactcatcattcgcctggccttggctgaaacg
ttctgcttgaactgtggcatcctggccttggatgagccaacaacaaatcttgaccgagaa
aacattgagtctcttgcacatgctcttgttgagataatcaagagtcgctcacagcagcgt
aacttccagctcctggtcatcactcacgatgaagattttgtggagctcttaggccgttct
gaatatgtggagaaattctacaggattaagaagaacatcgatcagtgctcagagattgtg
aaatgtagtgttagctccctgtcttatgttcattaa
DBGET
integrated database retrieval system
