Mirounga leonina (Southern elephant seal): 118017186
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Entry
118017186 CDS
T07472
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mlx04515
]
118017186
Cell adhesion molecules [BR:
mlx04515
]
Cadherins
Protocadherins
118017186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Ly49
Motif
Other DBs
NCBI-GeneID:
118017186
NCBI-ProteinID:
XP_034870988
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MAAAHGKPLQSRQVGSLLFLLCISVGSAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVAEGNKLHFRLHRKTGDLFVKEKLDRESLCGKTDPCVLHFEIVLVEPLQSFRVE
VRVFDINDNAPIFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSPNAYFHL
HTRFRSHGPKYAELVLDKPLDREEQPEVNLTITAVDGGSPPKSGIAHIRVEVLDVNDHVP
QFSRLVYRAQVPENSANGSLVATVSAADLDEGSNKEITYSLAQNPEAILQTFQIDSHSGE
VRLRGPLDFEAVETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSMSSPLPEDS
PPQTVVALFSIRDRDVRVGGKITCFLREDLPFAVKPTFRNSYSLVTDRGLDREEVSGYNI
TVVAMDTGPPSLFTETVIEVLIADINDNPPIFQEDSYILTVRENNSPAIFIGKVHAEDLD
LGENAQVTYTLLPPQSGDLSVFAYISINSDNGKLYALRTMDYEAIQNFHFVVKATDGGFL
SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSADAGYLVTKVVAVDGDSGQN
SWLSYHLLKATDPGLFSVQQQNGEIRTLRQISERDPMIQKLIILVQDHGQPALSTTASLS
ILLVDGFSEPYLQFRDPSKNPTRVNPSTKYLVISLAVLSFLFLLSVTVIFVIHIYQKVKY
REKFTVEEHFYDDCNFPNNLVQGGANGSFSQPCPYEMCSATGSSNSEFRFLKRFMPNFPF
PHGAGEAKPEAGSNLPPDSDRNRSRGSEDRGRVPDNCM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcacggaaaacccctgcagagcaggcaagtagggtctcttctttttttg
ttgtgcatctctgtggggagcgcggccaccatccgctattcagtggcggaagagatggag
agcggttcgtttgtggctaatgtggctaaggacctggggctggaggtagggaagctggct
gcgcgcggggcgcggctggttgccgaaggcaacaaactgcatttccggctccaccgcaag
acaggggatctgttcgtgaaggagaaactggatagggagtcactgtgtggcaaaacggac
ccgtgtgttctgcactttgaaatagtcctggtggagccgctgcagtcctttcgtgtcgag
gtcagggtatttgatatcaacgacaatgccccgattttcctgaacaaggagccgctttta
aagattccggagagcacacccctgggttcacgttttcctctgcagagcgcccaggacctg
gacgtgggcctcaatggtcttcaaaactacaccttgagccccaacgcgtatttccacctg
catacccgctttcgcagccatgggcccaagtatgccgagctggtcctggataagcccctg
gacagagaggagcaacctgaagtcaacttgacaattacggcggtggacggcgggtcccca
cccaagtctggcatcgcccacatccgcgtggaggttctggacgtcaatgaccacgtgcct
cagttctctaggctcgtgtaccgcgctcaggtaccggaaaatagcgccaatggttcactg
gtggctactgtgagtgccgcagacctggacgagggctccaacaaggaaataacttactcc
ttagctcaaaacccagaagcaattctccagacgtttcagattgactctcacagtggagag
gttcgactgagagggcccctagattttgaagcggtcgaaacatacgatattgacattcaa
gccaccgacggagggggcctctctgcccacagcaaagtcctggtggaagtagtggatgtt
aatgacaatccccctgaggtgacagtctcctctatgtccagccctctccctgaggactcc
ccaccacaaaccgtagtggcccttttctctattcgagacagggacgttcgggtgggagga
aaaatcacctgcttcctcagagaagaccttccttttgcagtcaaaccaactttccggaat
tcttactcactggttactgacagaggcttggatcgggaagaggtttcaggctacaatatc
accgtcgttgccatggatactgggccacccagtctgttcacagaaactgtgattgaggtg
ttaatagctgacattaatgacaatcccccaatatttcaggaagactcctacattttgact
gttcgagaaaacaacagcccagcaatttttattggcaaagttcatgctgaggatctagat
ttgggtgagaatgcccaagtaacatatactctgctgcctccacaaagtggagatttatca
gtctttgcttacatctccataaattcagacaacgggaagctctatgcactgagaaccatg
gattatgaggccattcaaaattttcattttgtggtaaaggcaactgatgggggcttcctg
tcactgagtagccaggttactgtaagagtggttgttctggatgacaatgacaaccgccca
atgatcttgtacccactgcagaatggcaccttgccctgcaatgacctggtgcccaggtct
gcagatgcaggctacctggtgaccaaggtagtggctgtggatggtgactcaggtcagaat
tcttggctttcatatcatctccttaaggccactgaccctgggttattctctgttcaacaa
caaaatggggaaatccgtacattgcggcagatatctgagagagaccccatgattcagaaa
ctgatcattcttgttcaggatcatggccaaccggctctttccactactgcctcactcagc
atcttgctggtagatggtttttctgaaccctatctgcagttccgggatccttccaagaat
cctacaagggtaaatccatccactaaatatttggtcatttctctggctgtgctctccttt
ctatttctcctctccgtcacagtgatctttgttatacacatctaccagaaggttaaatat
agagaaaagttcacagttgaagagcatttctatgatgactgtaatttccctaacaacctg
gtacaaggaggggccaatggatcgttctctcagccctgtccctatgagatgtgctcagcc
actggctccagcaatagtgagtttcggtttcttaagcgctttatgcccaacttccccttc
ccccatggcgccggagaggcaaaaccagaggctggctccaatttaccaccagattctgat
aggaataggtctcgggggtcagaggaccgtggccgagtacctgacaactgtatgtag
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