Mirounga leonina (Southern elephant seal): 118017331
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Entry
118017331 CDS
T07472
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04360
Axon guidance
mlx04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118017331 (ROBO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
118017331 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mlx04515
]
118017331 (ROBO1)
Cell adhesion molecules [BR:
mlx04515
]
Immunoglobulin superfamily
ROBO family
118017331 (ROBO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Ig_PDGFR_d4
Unc5_NetrinR_N
DUF7908
Ig_J_second
Big_4
Motif
Other DBs
NCBI-GeneID:
118017331
NCBI-ProteinID:
XP_034871039
LinkDB
All DBs
Position
Unknown
AA seq
1615 aa
AA seq
DB search
MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT
IRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSA
EFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKA
EASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSTSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPI
IRQGPGNQTVAVDGTVVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAK
LGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNT
VTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRA
ANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWT
VDQQSQYIQGYKILYRPSGANHGESEWLVFEVRTPAKNSVVIPDLRKGVNYEIKARPFFN
EFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVW
CLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSEPQFIQLDSHGN
PVSPEDQVSLAQQISDVVKQPAFIAGIGASCWIILMVFSIWLYRHRKKRNGLTSTYAGIR
KVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCT
AGNGNSDGNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSP
NLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPAQQKQEVAPIQYNI
MEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPK
QGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDE
RGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEETGHMQHQPDRRRQPV
SPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPA
SSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGL
KVARRQMQDASGRRHFHASQCPRPTSPVSTDSNMSAAQIQKARPAKKQKHQPGHLRREAY
TDDLPPPPVPPPAIKSPTVQSKAQLEVRPVIVPKLPSIEARTDRSSDRKVGSYKGREVLD
GRQVADMRTNLGDTREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSN
NPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggagcccgctcacttttacctctttggattaatatgtctctgttcaggctcc
cgtcttcgtcaggaagattttccacctcgcattgttgaacacccttccgacctaattgtg
tcaaaaggagaacctgccactttgaactgtaaagccgaaggccgccccacacccactatc
gaatggtacaaagggggggagagagtggagacagacaaagatgaccctcgctcacaccga
atgttgctgccaagtggatctttatttttcttacgtatagtacatggacgaaaaagtagg
cctgatgaaggggtctacgtctgtgtagcaaggaattacctcggagaggccgtgagccat
aacgcatcgctggaggtggcaatcctacgggatgacttcagacaaaatccttctgatgtc
atggtggccgtgggggagcctgctgtgatggaatgccaacctccacgaggccatcccgaa
cccaccatttcctggaagaaagatggctctccactggatgacaaagatgaaagaataact
atacgaggcggaaagctcatgattacttacacccgcaaaagtgatgctggcaaatatgtt
tgtgttggtaccaacatggttggggaacgtgagagtgaagtagcagagctaactgttttg
gagagaccatcgtttgtgaagagacctagtaacttggctgtgactgtggacgacagtgca
gaattcaaatgtgaggcccgaggcgaccctgtgcctacggtacgatggagaaaagacgat
ggggaactgcccaaatccagatatgaaatcagagatgatcataccctgaagattcggaaa
gtgatggctggtgacatggggtcatacacttgtgtggcagaaaatatggttggaaaggct
gaagcatcagctactctgactgtccaagttgggtctgaacctccacactttgttgtgaaa
ccccgtgaccaggttgttgccttgggacgaactgtaacgttccagtgtgaagcaaccgga
aatcctcaaccagctattttttggagaagagaggggagtcagaatctgcttttctcatat
cagccacctcagtcaaccagccgcttttcggtctcccagactggtgatctcactatcact
aacgtccaacgatctgatgtcggttattatatctgccagactttaaatgttgctggaagt
atcatcacaaaagcatatttggaagttactgatgtgattgcagaccggcctccccccatc
attcggcaaggtcctgggaatcagactgtggcagtggatggtaccgtagtgctcagctgt
gtggccacaggcagtccggtgcccacgattctgtggagaaaggatggagtccttgtgtca
acccaagattctcgaatcaagcagctggagacgggagtgctacagatccgatacgctaag
ctgggtgacacaggtcggtacacctgcattgcatcgacccccagtggtgaagcaacatgg
agtgcttacattgaagtccaagaatttggagttccagttcagcctccgagacccactgac
ccaaatttaatccctagtgccccctcaaaacccgaagttacagatgtcagcagaaacaca
gtaacattgtcatggcaaccaaatttgaattcgggtgcaactccaacatcttatattata
gaagccttcagccatgcatctggtagcagttggcagaccgtagccgagaacgtgaaaaca
gaaacatttgccattaaaggactcaaacctaatgcaatttaccttttccttgtgagggca
gcaaatgcgtatggaattagtgatccgagccagatatcagacccagtgaaaacgcaagat
gttcccccaacgagtcagggagtagatcacaagcaggtccagagagagctgggaaatgtt
gtactgcacctccacaaccctaccatcctttcttcctcttcagtcgaagtgcactggaca
gtggaccaacagtctcagtatattcaaggatataaaattctttatcggccatctggagcc
aaccatggtgaatcggagtggttagtttttgaagtgaggaccccagccaaaaatagcgtg
gttatccctgatctcagaaagggggtcaactatgaaattaaggctcgtcctttttttaat
gaatttcaaggagcagatagtgaaattaaatttgccaaaaccttagaagaagcacccagt
gccccaccccaaagtgtaactgtatcaaagaatgatggaaatggaactgcaattcttgtt
agttggcagccgcctccagaagacactcagaatggaatggtccaagagtataaggtttgg
tgtctgggcaatgaaactcgctatcatataaacaagacggtggatggctccaccttttct
gtggtcattccttctctggttcctgggatccgatacagtgtagaggtggctgccagcact
ggggccggggctggggtgaagagtgaaccacagttcatccagttagattctcatggaaac
cccgtgtcacctgaagaccaagtcagccttgctcagcagatctccgacgttgtgaagcag
ccagcattcattgcaggaatcggggcgtcctgttggatcatcctcatggtctttagcatc
tggctgtatcgacaccggaaaaagagaaatggactgaccagtacttacgcgggtatcaga
aaagtcccgtcttttaccttcacaccaacagtaacttatcagagaggaggtgaagctgtg
agcagtggagggaggccaggacttctgaacatcagcgaacctgccacgcagccgtggctg
gcagacacgtggcccaatactggcaacaatcacaatgactgctccatcaattgctgcacg
gcaggcaatggtaacagtgatggcaacctgaccacctacagtcgcccagctgattgtata
gccaattataacaaccaactggataacaaacaaacaaatctgatgctccctgagtcaact
gtttatggtgatgtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagccca
aatctgaaggatgggcgttttgtcaatccatcagggcagcccactccttacgccaccacc
cagctcatccagtcaaacctcagcaacaacatgaacaatggcagtggggactccagcgag
aagcactggaaaccgcctgcacagcagaaacaggaagtggcccccattcagtataacatc
atggagcaaaacaaactgaacaaagattatcgagcaaatgacacaattcctccaactatc
ccatacaaccaatcatacgaccagaatacaggaggatcctacaacagctcggaccgaggc
agtagtacatctgggagtcaagggcacaagaaaggggcacggacacccaaagtaccaaaa
cagggtggcatgaactgggcagacctgcttcctcccccgccagcacatcctccacctcac
agcaatagtgaagagtacagtatttccgtagacgaaagctatgaccaagaaatgccgtgt
cccgtgccaccagcaaggatgtatttacaacaggatgaactagaagaggaggaagatgag
cgaggccccactccccctgtgcggggagcagcttcttctccagctgcggtgtcttatagc
catcagtccactgccactctgaccccctccccacaagaagaactccagcccatgttgcag
gactgcccggaggagactggccacatgcagcaccaacccgataggagacggcagccggtg
agcccccctccaccaccacgaccgatttccccaccacatacctacggatacatttcagga
cctcttgtctcagatatggatacagatgcgccagaagaggaagaagatgaagcggacatg
gaagtcgccaagatgcagaccagacggcttttgttacgtggccttgagcagacccctgcc
tccagtgtgggggaccttgagagctctgtcactgggtccatgatcaatggctggggctca
gcctcagaggaggacaacatttccagtggacgttccagcgtgagttcttctgatggctcc
ttcttcaccgatgctgattttgcccaggcagtggcagcagctgcggagtatgctggtctg
aaagttgcacgtcgtcaaatgcaggatgcttctggccgccgccattttcatgcgtcccag
tgccctcgacccacaagtcctgtttctacagacagcaacatgagtgctgctcaaatacag
aaggccagaccagccaagaagcaaaaacaccagccaggacatctgcgcagagaagcctac
acagatgatcttccacctcctccagtgccaccacctgctataaagtcacccactgtccag
tccaaggcacagctggaggtgcgacctgtaatcgtgccaaaactcccttctatagaagca
agaacagacagatcatcagatagaaaagtaggcagttacaaggggagagaagtattggat
ggaagacaagttgctgatatgagaaccaatctgggtgataccagagaagcacaggaacag
caaaatgatggcaaaggacgaggaaataaggcagcaaaacgagaccttccaccagcaaag
actcacctcatccaagaggatattctaccttactgtagacctacttttcctacatccaat
aatcccagagatcctagttcttcaagctcaatgtcatcaagaggatcaggaagcagacaa
agagaacaagcaaatgtaggtcgaagaaatattgcagaaatgcaagttcttggaggatat
gaaaggggagaagataataatgaagaattagaggaaactgaaagctga
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integrated database retrieval system
