Mirounga leonina (Southern elephant seal): 118017569
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Entry
118017569 CDS
T07472
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04015
Rap1 signaling pathway
mlx04510
Focal adhesion
mlx04722
Neurotrophin signaling pathway
mlx04910
Insulin signaling pathway
mlx05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
118017569 (RAPGEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118017569 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
118017569 (RAPGEF1)
09156 Nervous system
04722 Neurotrophin signaling pathway
118017569 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
118017569 (RAPGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
118017569
NCBI-ProteinID:
XP_034871451
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MFTHPRRPWCWPASTDTHSVSLRAYVSVSSGEEEASGTTGIATVRLKLGAHVTVSQGNLA
FQPPPAAFFMSLTPQASPWPSGLQVLALTPPLVTFKSRASTQPTARQFDCNFCAFVFSSS
SRGVVGARSQNPKHKEKAVLLFLVLQHRVLAVADKYSQRSHLSSFTMKLMDKFHSPKIKR
TPSKKGKPAEVSVKNPEKPVSKEATDRFLPEGCPLPLDLEQQTVEFMSTSAVASRSQRQK
NLSWLEEKEKEVVSALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQSDPRIQHS
SALSSCYNRVYQSLANLIRWSDQVMLEGVNSEDKETVTTVKGVIKAVLDGVKELVRLTIE
KQGHPSPTSPVKPSSPACKPDGQSELPLTDREMEILNKTTGLSQSAELLPDSTDEEVAPP
KPPLPGIRVVDNSPPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDC
YTQRRLSGGSHSYGGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDP
DYEFLQQDLSNTDQIPQPVACHLSPLPESLGESGSPFLGCPFQLPPAPSSCPQPDGPLAP
GQQVDTPPALPEKKRRSAASQTTDSSGCRVSYERHPSQYDNISEDDLQNPASGPSVPFTP
FAAILPFQQGGSSASVEFVGDFAVPESTGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQP
SMFYQTPQNEHIYQQKNKMLMEVYGFNDSFSTEASQELAPPPALPPKQRQLQASYAASSF
SSVSYCVQQTKVAFTPEDGSAAQGISVSVSNSFLSRHGNLPVPSYKSVFRSYSQDFVPHN
QASVQPFLPPTSSSSPHFPPVHQSQSSDLAVPAVASLPPSTVDGPLSSSQESSFHGNTVR
LPSEISLTDSPQTPSSENTSEEAGEGEYISLYSSGQGSEELAHSRGESPAMKDGHPRDPS
SASSAAGKESRDGDRASRSPDGSELARSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVR
GGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYEKFSPFADTFKKR
VSKNTFFVLVRVVDELCLVELTEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKK
LLRCANSDQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNE
EKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAIL
SALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLT
FVHLGNPDYIDGKVNFSKRWQQFNILDSMRCFQQAHYDIRRNDDIINFFNDFSDHLAEEA
LWELSLKIKPRNITRRKTDREEKT
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgtttacccatcctagacgcccatggtgctggccagcatccaccgacacccactctgtg
tctcttagggcttatgttagtgtcagctccggggaggaggaagccagtgggaccacaggc
attgccacggtgcgcttgaaactgggggcccatgtaaccgtgtcccagggcaatttggcc
ttccagccgcccccggctgcctttttcatgtcattaaccccgcaggccagcccttggcct
tccggactccaggtcttggctcttacacctccacttgtcacctttaaaagcagagccagc
actcaacccacagcaagacagtttgactgcaacttttgtgcatttgtgttcagtagttcc
agcagaggagttgtgggagcacgctctcagaacccaaaacataaggagaaagcggtactg
ctctttttggttttacaacaccgggtgcttgcagtggctgataaatactctcagcgttct
catctctcctccttcaccatgaagctgatggacaaattccactcgcccaaaatcaagaga
acgccatcaaagaagggaaaaccagctgaggtgtctgtgaaaaatccggagaagcctgtg
agcaaagaggcaacagacagatttctaccagagggctgccccctccccttggatctggag
cagcagacagtagagtttatgtccaccagtgctgtggcttccaggtctcagaggcagaag
aacctgagctggctggaagagaaagaaaaggaagttgttagtgccttgcgctactttaag
accattgtggacaaaatggctattgataagaaggtgctggagatgcttccagggtcagcc
agcaaggtgctggaggccatcttacccctggtgcagagcgatcctcgaattcaacacagc
tcagccctctcctcctgctataaccgagtgtaccaaagtctcgccaacctcatccgttgg
tctgaccaagtgatgctagaaggtgtgaactcagaagataaagagacggtgacaaccgtg
aagggggtcatcaaggctgtgttggacggagtgaaggagctggtcagactaaccatcgag
aagcaggggcatccgtctccaaccagcccagtgaaacccagttccccagcctgcaaaccc
gatggccagtctgagctccccctgacagatcgagagatggagattctaaacaagacaact
ggcctttcccagtcagccgagcttctcccagactctacagatgaggaggtcgcacccccc
aagccccccttacctggcattcgggtggttgataacagtcctccaccagcattgccaccg
aagaaaagacagtcagctccatccccgacccgagtggctgtcgttgcccccatgagtcga
gccaccagtggctccagtttgcccgttggaattaataggcaggattttgacgtggactgt
tacacacaaaggcgactctcaggaggcagccactcgtacggcggagagtcgccccgcctg
tccccctgcagcagcataggcaagctcagcaagtcagacgagcagctgtcctctctggac
agggacagcggccagtgctcccggaacacaagctgtgaaacactagatcactatgatcct
gactatgaattccttcagcaagacctctctaacacagaccagatacctcagccagtggcc
tgtcacctcagcccgttgccggagtccttgggagagtctgggtctccgtttctcggctgc
cctttccagttgcctccagcacccagcagctgtccccagccagatgggccgttggcccca
ggacagcaggtggacacgccccctgctctccccgagaagaagcgcaggagcgcggcctcc
cagaccacggacagctcgggctgcagggtgtcctacgagcggcacccctcgcagtatgac
aacatctccgaggatgacctgcagaacccagcctcgggcccgtccgtccccttcacgccc
tttgctgctattctcccctttcagcaaggagggtcctcagcctctgtcgaatttgtgggt
gattttgctgttcctgaatcaacgggtgacccggaaaaaccacctcctctaccagagaag
aaaaacaaacacatgctagcctacatgcagctgctggaggactactcagaaccgcagccg
tccatgttctaccagacgccgcagaacgagcacatctaccagcagaagaacaagatgctc
atggaggtgtacggcttcaatgactcgttcagcaccgaggcctcgcaggagctggcgccg
ccccccgccctgccccccaagcagcggcagctgcaggcctcctatgctgcttcttccttc
tcctctgtctcctactgtgtccagcaaactaaagtggccttcacccccgaggacggcagt
gccgctcagggcatcagtgtgtccgtctctaactcctttctcagccggcacggcaacttg
cctgtgccctcgtataaatctgtgtttaggtcctactcccaggatttcgtgcctcacaac
caagcttccgttcaacctttccttccgcctacctcctcttcctctccacatttcccaccc
gtccaccagtctcagagctctgacttagcggtgccagccgtagccagtctgcctcccagc
accgtggacgggcctctctcatcttctcaggagagcagctttcatgggaacactgtccgc
cttccttccgaaatctctctcactgactcgccccagacgccttcgagtgaaaacaccagt
gaggaggctggtgagggtgaatacatcagtttgtattcctctggccagggcagcgaggag
ctggctcactctcgaggagaatcaccagctatgaaagacggacatcccagagatccctcg
tcggccagcagcgcggccgggaaggagagcagagacggtgacagggcctcaaggtcacca
gatggttcagagttggctcgatcggaggaggaagtggatgagctgtctctcatcgaccac
aatgagattatggcaaggctgacactcaagcaggagggtgacgacgggccagacgtccgt
ggcgggtctggagatatcctactggtgcacgctactgagacagacaggaaagatttggtg
ttgtactgtgaggccttcttgaccacctacaggaccttcatcaccccggaggagctcatc
aagaagctgcagtacaggtacgagaagttttctcccttcgccgacacattcaagaagcgt
gtcagcaagaacacgttctttgtgctggtgcgggtggtggatgagctgtgcctcgtggag
ttgacagaagagatcttgaagctgctgatggagctggtcttccgcttggtgtgcaacggg
gagctcagcctggcccgcgtgctccggaagaacatcctggacaaggtggaccagaagaag
ctgctcaggtgtgccaactccgaccagcccctggcagcccggggggtagccgccaggccg
gggactttgcatgactttcacagccatgaaatagccgagcagctgaccctgctggatgct
gagctcttttataaaatagagattcctgaggttttgctttgggcaaaagagcagaatgag
gagaaaagccccaacttgacccagttcacggagcacttcaacaatatgtcctactgggtc
cggtcaataatcatgttacaagaaaaagcccaggacagggagcggctgctgttgaagttc
atcaagatcatgaagcacttacggaagctgaacaactttaactcctacctggccatcctc
tcagccctggactcggctcccatccgcaggctggagtggcagaagcagacctcggagggc
ctggccgagtactgtacactgatcgacagctcgtcctccttccgcgcctaccgggccgcc
ctctccgaggtggagcccccctgcatcccctacctggggcttatcctgcaggacctcacc
tttgttcacctggggaacccagactatattgatgggaaggtgaatttttccaaacggtgg
cagcagttcaacatcctggacagcatgcggtgcttccagcaagcgcactacgatatccga
agaaatgatgacatcataaacttcttcaatgacttcagcgaccacctggcggaggaggcc
ctgtgggaactttctctgaaaatcaaacctaggaacataacaaggagaaaaacagaccgg
gaggagaagacctag
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