KEGG   Mirounga leonina (Southern elephant seal): 118017790
Entry
118017790         CDS       T07472                                 
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mlx  Mirounga leonina (Southern elephant seal)
Pathway
mlx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mlx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118017790 (PRPF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mlx03041]
    118017790 (PRPF4)
Spliceosome [BR:mlx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    118017790 (PRPF4)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 PRP4 Beta-prop_EML WDR90_beta-prop_4th WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Vps41 WD_LRWD1 Beta-prop_IFT140_1st WD40_like Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 118017790
NCBI-ProteinID: XP_034871909
LinkDB
Position
Unknown
AA seq 521 aa
MATSRGSSTAAKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggctacctcacgaggctcctccacggcagccaaaactaaggcacctgatgacttagtt
gctcctgttgtgaagaaaccacacatctattatggaagtttggaagagaaggagagggag
cgtctggccaaaggagagtctgggattttgggaaaagaaggacttaaagctggaattgaa
gcaggaaatattaacataacctctggagaggtgtttgaaattgaagagcacatcagtgaa
cgacaggctgaagtgttagccgagtttgagagaagaaagcgagcccggcaaatcaatgtt
tccactgatgactcagaggtcaaggcttgccttagagccttgggagagcccatcacactt
tttggagagggtcctgctgaaagaagagaaaggttaagaaatatcctctcagtggttggt
actgatgccttaaaaaagaccaaaaaagatgatgagaaatctaagaagtccaaagaagag
tatcagcaaacctggtaccatgaaggaccaaacagcctgaaggtcgctagactatggatt
gctaattattcactgcccagggcaatgaaacgcttggaagaggctcgtctccataaagag
attcctgagacaaccaggacctcccagatgcaagagctgcacaaatctctccggtctttg
aataatttctgcagtcagattggggatgatcggcctatctcctactgccactttagtcct
aattccaaaatgctggccacagcttgttggagtgggctttgcaagctctggtctgttcct
gattgcaacctccttcacactctccgaggccataacacaaatgtaggagcaattgtattc
catccaaaatccactgtctccttggaccagaaagatgtcaatctggcctcttgtgctgca
gatggttctgtgaagctttggagccttgacagtgatgaaccagtggcggatattgaaggc
catacagtgcgtgtggcccgtgtaatgtggcatccatcggggcgtttcttgggcaccacc
tgctatgaccgctcatggcgcttatgggatttggaggctcaagaggagatcctgcatcag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcatttggtcgtgtttgggacctgcgcacaggacggtgtatcatg
ttcttagaaggccacctgaaggaaatctatggaataaatttctcccccaatgggtaccac
attgcaactggcagtggtgacaacacgtgcaaagtgtgggaccttcgacaacggcgttgt
gtctataccatccctgcccatcagaacttagtgactggtgtcaagtttgagcctatccat
gggaatttcttgctcactggtgcttatgataacaccgccaagatctggacccacccaggc
tggtcgccactgaagactctggctggccatgaaggcaaagtgatgggcctagacatttct
tccgatgggcagctcatagccacttgctcatatgacaggaccttcaagctctggatggct
gaatag

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