| Entry |
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| Symbol |
SHOC1
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| Name |
(RefSeq) protein shortage in chiasmata 1 ortholog
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| KO |
| K28108 | shortage in chiasmata 1 |
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| Organism |
mlx Mirounga leonina (Southern elephant seal)
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| Brite |
KEGG Orthology (KO) [BR:mlx00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:mlx03036]
118017816 (SHOC1)
Chromosome and associated proteins [BR:mlx03036]
Eukaryotic type
Meiosis-specific proteins
Others
118017816 (SHOC1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1517 aa
MFSTFKYCAIDYLYENIVRKKFCRDALLLQVPSCLYQDGNYAGVIDNKFRRPWMRVSAVS
VWGMTDDISVLDQWKASLFVEEFLEKKTITGMVTQIDCGFEEVVPSSNPNSQTEVEEASL
YTHKDYTEVFTLVSGLEKCPALQTQDEDLSIDEEIIFLNNLMAYKSQLPTLHTLLSRLKL
FLVKDPILDFKGQIFTEANFFRECFSFQEDLKGLVEEDFYMDKENFSQEKLEDTVGLNQT
PSILPECEFLIPTSLKQEVDIPSLSKLKESLNLMPEIINYTDESEKLFRIDLTTKHGIDI
EDIKCSFTEILAIQSYCEPEYSEPVELEMPLTHLHLTNQHSSVTSLCTGLQTFPFSPICK
ISLLTAEESANKNWMVWQLESCRSSLKPFLLTVPRSEEPNSQYSVMDLKKIFSIEEESLV
VNPVSTEWWGKGGLNLKEAETLEHLNTYLCHDDLSSDDTKMEIFLPTKVLQLEYKYAIVN
ITSWLEHESCSSPIVLINETSTNDHLLLPQKISSPAEEVPDLCFSDDNFSVKRPKEEKPK
NDLELVYRISQNKENEDYLELDCTVPSIESSSSPKIEKASFKHGKKWENDLDLLSDFIML
RNKYKTCTSKTEVTDSKEDDDKEEHSLTLQEESPPVCTNKAIEKINQERRVDNVIEIQAS
ESQCQAFCLLEAAATPILKKLVCLCTLPAANWTFATVIFDQTRFLLKEQEKVISDAIQQG
TNDEKEMTFKHAALLHLLVTIRDVLLTCSLDTALGYLSNAKDIYRSILGSYLDDIWRQLE
IVQFIREKKPETNYKIQELQCQILNWMQSEQQIKVLIIVRMDSDGEKHLLIKILNKMEGL
TLTVLHSNRRKDFVESEGVLNGTSSCVVVHNQYIGSDFPWSNFSFVVEYNFVENSCWTKH
CEKLNIPHKVFKVILPDTVLKRSTLLDSFGGFLLEIQVPYVFFASEGLLNTPEILQLLES
KYNITLVERCCSESLKLFGCTECYVVVTVDEHTAIILQDLEELNCEKASDNIIMRLMALS
LQYSYCWIILYTKKTLNSEYHLTEKTLHHLALIYAALISFGLKSEELDVKLIIAPGVEEA
ALIIRQIADHNLMTSKREPHEWLDKSWLEVSPSKEEMYLLDFPCINPLVAQLMLNKGPSL
HWILLATLCQLQELLPEVPEKVLKHFCSITSLFKISSSSITNSPPSPLPQENGNQTSTFT
SQSSASGSSNSVFQEHNEYYHYSDIGETVHRDTNSTSNYNSSLMELREMPCILPPVTSYN
QASYWKDSSCNPNTVHNPFLVNTESRNVAGNSFRNQNDSESDVFYLDLTQMNCENISPID
TQKRVAPNFINYQKKGTHDAKGPINKEVSAPSFSLEGSQSSLPWNFKKNVWEQQNHSFNL
EYDVQQTTCDKWYSQKDNLFTNQQKCLSDELEGFICESSNAGTKKTFWKELPSVSSLDLF
CASDPNVNKKEFSSLYFHQRAGKCLGQKRHSESSSNSGDKKSLPDFMCSQLPQFKKRRLV
YEKVPGRVDGQTRLRFF |
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| NT seq |
4554 nt +upstreamnt +downstreamnt
atgttttcaacattcaaatattgtgcaatagactatttatatgagaatatagttagaaag
aagttttgcagagatgctttattgcttcaagtcccttcatgtttatatcaagatggaaat
tatgcaggagttattgataataagtttaggaggccatggatgagagtttcagctgtttca
gtgtggggaatgacagatgatatttcagtcttggatcaatggaaagcaagtctctttgtg
gaggagttcctagagaaaaaaacaattacaggaatggtgactcagattgactgtgggttt
gaggaagttgttccaagttcaaacccaaactcccaaactgaagtagaagaagccagttta
tatacccataaggactacactgaagtctttacacttgtcagcggtttagaaaaatgtcca
gcacttcaaacacaggacgaagatttgtctattgatgaagaaataatttttttaaataac
ttgatggcctataaaagtcagctaccaactttgcatactttgttgagtaggctaaaacta
tttttggtaaaggaccccattttagatttcaaaggacagatcttcacagaagctaatttc
ttcagggaatgtttctcttttcaagaagatttgaaaggtctagtggaagaagatttttac
atggataaagagaactttagtcaggaaaagctagaagatacagtaggtttaaatcaaact
ccatcaattttgcctgagtgtgaattcttaatacctacaagcctcaaacaagaagttgat
attccatcactctccaaactgaaggaatccttaaacttaatgccagaaataataaattat
acagatgaaagtgaaaagcttttcagaatagatcttactaccaagcatggaattgacatt
gaggatataaaatgcagcttcacagagattttggccattcaaagctattgtgaaccagag
tacagtgaaccagtagagttagaaatgccattaactcatctacatctaacaaaccaacat
tcttccgtgacttcattatgtacaggacttcagacatttccattttctcctatttgtaaa
attagtttgcttactgctgaagaatcagctaacaaaaactggatggtgtggcagttagaa
agctgcagaagctcattgaaaccatttttgcttacagtgccaagaagtgaagagcccaac
agtcaatattcagttatggatttgaaaaagatattttctattgaagaagaaagtcttgta
gttaatcctgtaagcacagagtggtggggaaaaggaggactaaatctgaaagaggcagaa
actttggaacatctgaatacatatttgtgtcatgatgatctatcttctgatgatactaaa
atggagatatttttgccaacaaaagtgcttcagttagaatataagtacgcaatagtaaat
atcacttcatggctagaacatgaaagttgttcctcacctattgtacttattaatgagaca
tctacaaatgatcatttattacttccacaaaagatttcatctccggcagaagaagtacca
gacctgtgtttttctgatgacaatttttctgttaaacgaccaaaagaagaaaaaccaaag
aatgatctagaactagtttatagaataagccaaaataaagaaaatgaagattacttggaa
cttgactgcacagtaccatctattgaatcatcttcctctccaaaaattgaaaaagcatct
tttaaacatggtaaaaaatgggagaatgatttggaccttttgagtgacttcattatgctg
cgaaataaatataaaacttgcacctcaaagactgaagtcacagacagtaaagaagatgat
gataaagaagaacattctttgactcttcaggaagaaagtcctcctgtttgtactaataaa
gccatagagaaaataaatcaggaaaggagagtggataatgtcattgaaattcaagcatca
gagagccagtgccaagcattctgtctcctagaagcagcagctactcctatcttaaaaaaa
cttgtatgcctctgtactctccctgctgctaattggacatttgccactgtcatttttgac
caaacaaggttcctcttaaaggaacaagaaaaagtaataagtgatgctattcagcaaggt
acaaatgatgaaaaagaaatgacgttcaagcatgctgctctcttacatcttctggtaaca
attagagatgtccttttaacatgtagcttggacacagcgttgggatatttgtcaaatgca
aaagatatctacagaagcattttaggctcctatttggatgacatttggagacagctggag
attgtacagtttattagggaaaaaaagcctgaaaccaactacaagatacaagaactgcaa
tgtcagatactaaattggatgcaaagtgagcaacagattaaggtgctgattatagtaaga
atggactcagatggtgaaaaacatttactcattaaaatccttaacaaaatggaaggttta
acattgactgtcttacattcaaacagaaggaaagattttgtggaatctgaaggtgtttta
aatggtacaagttcctgtgtagttgtacataatcaatatattggatcagatttcccctgg
agtaacttctcatttgtggtggaatacaattttgtagaaaactcttgttggactaaacac
tgcgagaaattgaatattcctcacaaggtcttcaaagtgattcttccagacacagtttta
aagagaagcaccttgctggatagttttggtggatttcttttggaaattcaggttccatat
gtgttttttgcatctgaaggacttcttaatactccagaaatacttcagttgctggaatcc
aagtacaatatcacactagtggagagatgctgcagtgagtcgttgaaactctttggatgt
acagagtgttacgtggtggtgacagttgatgaacacactgccataattttgcaggaccta
gaagaattgaattgtgagaaggcatcagacaatatcattatgagactgatggcattatca
ctccagtacagctattgttggataatcttatatacaaaaaaaacattaaactcagagtac
catcttacagaaaaaacacttcatcatctagcactgatttatgcagctttgatatcattt
gggctaaaatcagaagaactggatgtaaagcttataattgccccaggagtggaagaggct
gcactgataattcggcaaattgctgatcacaatttaatgacctcgaagagagaacctcat
gaatggttggataaatcctggcttgaagtttcaccatctaaggaagaaatgtacttactt
gactttccatgtattaacccattggtggctcagctcatgttaaacaaaggaccttcactg
cactggatattattagcaactctgtgtcaacttcaggagcttttacctgaagttccagaa
aaggtgttaaagcatttttgtagcatcacttccttattcaagattagttcttcttccata
acaaattcacctccaagtccattacctcaggaaaatgggaatcagactagtacctttacc
tcccagagttcagcttctggctcttcaaactctgtctttcaagaacataatgaatattac
cactattcagatataggagagacagtgcacagagatacaaacagcacttcaaactataac
tcttcccttatggaactaagagaaatgccatgcattttaccacctgtgacttcttacaat
caggccagctactggaaggactccagttgtaaccctaacacagtgcacaatcctttcctg
gttaatacagaatcaaggaatgtggctggtaactcctttcgaaaccaaaatgattcagag
tcagatgtcttttatttggatctaacacaaatgaactgtgaaaacatatcaccaattgac
actcagaagagagttgcccctaattttataaattaccagaaaaagggaacacatgatgca
aaaggacctataaataaagaagtgtctgcccctagcttttcactagaaggctcccaatct
tctcttccctggaactttaagaaaaatgtatgggaacaacagaatcactcattcaactta
gaatatgatgtacagcagactacatgtgacaaatggtactctcagaaagataatttattc
actaatcagcaaaaatgtctatcagatgagttagaaggcttcatatgtgaaagttcaaat
gctgggactaaaaagactttctggaaagaattaccatctgtctccagtttggatttattt
tgtgcttctgatcctaatgtaaataaaaaagaattcagcagtctttatttccaccaaaga
gctggaaaatgtttaggacagaaaaggcactctgaatcctcatctaactcaggagacaag
aaatcattaccagatttcatgtgctcacaactaccacaattcaaaaaacggcgtctagtg
tatgaaaaagtccctggtagagttgatggacaaactcgtctgaggtttttttga |
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