Mirounga leonina (Southern elephant seal): 118018473
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Entry
118018473 CDS
T07472
Symbol
ATXN2
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-2
KO
K23625
ataxin 2/2L
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx05014
Amyotrophic lateral sclerosis
mlx05017
Spinocerebellar ataxia
mlx05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118018473 (ATXN2)
05017 Spinocerebellar ataxia
118018473 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
118018473 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118018473 (ATXN2)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118018473 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
118018473
NCBI-ProteinID:
XP_034872901
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MSLKPQQQQQQQPPAAANARKPGGSGGLLTSPAAAPSPSSVSSSSAVASSSSAAAASAGG
GRPGLGRGRNSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYS
PKCDLVLDAAHEKSMESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAI
SAKVNGEHKEKDLEPWDAGELTTSEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSS
LSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNS
SEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPN
SGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSH
PSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHTPPSEA
AAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPGGPVLASPQAGIIPAE
AVAMPVPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKPNETSPSFSKT
ENKGISPIVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSRDLIKDKIEP
NAKDSFIENSSNCTSGSSKPNSPSISPSILSNTEHKRGPEVTSQGVQTSSPGCKQEKDDK
EEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPAPVYT
QPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAVPNMPQQRQDQHHQSTMMHP
ASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAP
PAHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNAT
LHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLA
PTPPAMTPASNTQSPQNSFPAAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSH
PTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagcctcagcaacagcagcagcagcagccgcccgcggccgccaatgcccgt
aaacccggcggcagcggcggccttctcacgtcgcctgccgccgcgccgtcgccgtcctca
gtctcatcgtcctcggccgtggcttcctcttcctcggcggcggcggcgagcgcaggcggc
gggcggcccggcctgggcagaggtcgaaacagcaaaggactgcctcaatccacgatttct
tttgatggaatttatgcaaatatgaggatggttcatatacttacgtcagttgttggatcc
aaatgtgaagtacaagtgaaaaatggaggtatatatgaaggagtttttaaaacatacagt
cctaagtgtgatttggtacttgatgctgcacatgagaaaagtatggaatccagttcgggg
ccaaaacgtgaagaaataatggagagtattttgttcaagtgttcagactttgttgtggta
cagtttaaagatatggactccagttatgcaagaagagatgcttttactgattctgctatc
agtgctaaagtgaatggtgaacacaaagagaaggacctggagccctgggatgcaggtgaa
ctcactaccagtgaggaactggaggctttggaaaatgatgtatctaatggatgggatccc
aatgatatgtttcgatataatgaagaaaattatggtgtagtgtctacatatgatagcagt
ttatcttcatatacggtacccttagaaagggataactcagaagaatttttaaaacgagaa
gcaagggcaaaccagttagcagaagaaattgaatcaagtgcccagtacaaagcccgggtg
gccctggaaaatgatgataggagtgaagaagaaaaatacacagccgttcagagaaattcc
agtgaacgtgagggccacagcataaacactagggaaaataaatatattcctcctggacaa
agaaatagagaagtcatatcctggggaagtgggagacagaattcaccgcgtatgggccag
cctggatcgggctccatgccatcaagatccacctctcacacttcagatttcaacccgaat
tctggttcagaccaaagagtagttaatggaggtgttccctggccatcgccttgcccatct
ccttcctctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgggca
gccacccctacacggccgccctccaggcccccctcgcggccatccagacccccgtctcac
ccctctgctcatggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaa
gggcctccaaggatgtccccaaaggcccagcgacaccctcgaaatcacagagtttctgct
gggaggggttccatttccagtggcctagaatttgtatcccataccccaccaagtgaagca
gctgctcctccagcagcaagaactagtcctgcggggggcacatggtcatcagtggtcagc
ggggttccaagattatcccctaaaactcacagacccagatctcccagacagaacagtatt
ggaaatactcctggtggaccagttcttgcttctcctcaggctggtattattccagctgaa
gctgttgctatgcctgttccagccgcatctcctacgcctgccagtcctgcatccaacaga
gctgttaccccatctattgaggctaaggattccaggcttcaagatcagaggcagaactct
cctgcagggaataaagaaaatatgaagcccaatgagacatcacctagcttctcaaagact
gaaaataaaggtatatcaccaattgtttctgaacatagaaagcaaattgatgacttaaag
aagtttaagaatgattttaggttacagccaagttctacttctgaatctatggatcaactg
ctaaacaaaaatagagagggagaaaaatcaagagatttgatcaaagacaaaattgaacca
aatgctaaggattctttcattgaaaatagcagcaattgcaccagtggcagcagcaaaccg
aacagtcccagcatttccccttcaatcctcagtaacacggagcacaagaggggacctgag
gtcacatcccaaggggttcagacgtccagtccaggatgtaaacaagagaaagatgataaa
gaggagaagaaagatgcagctgagcaagtgagaaaatcaactttgaatcctaatgcaaag
gagttcaaccctcgctccttttctcagccaaagccttctacaaccccaacttcacctcgt
cctcaagcacaacctagcccatctatggtgggtcatcagcagccagctccagtttatact
cagcctgtttgttttgcaccaaatatgatgtatccagtcccagtgagcccaggcgtgcaa
cctttataccctatacctatgacgcccatgccagtgaatcaagccaagacatatagagca
gtaccaaatatgccccaacagcggcaagaccagcatcatcagagcaccatgatgcaccca
gcctcagcagcgggcccaccaattgtggccaccccaccagcttattccacacaatatgtt
gcctatagtcctcagcagtttccaaatcagcctcttgttcagcatgtgccacattatcag
tctcagcatcctcatgtctatagtcctgtgatacagggtaatgctagaatgatggcacca
ccagcacatgcccagcctggtttagtgtcttcttcagcaactcagtacggggctcatgag
cagacgcatgcgatgtatgcatgtcccaaattaccatacaacaaggagacaagcccttct
ttctactttgccatttccactggctcccttgctcagcagtatgcgcacccgaatgctacc
ctgcacccacatactccacatcctcagccttcagctacccccactggccagcagcagagc
caacatggcggaagtcatcctgcacccagtcctgttcagcaccatcagcaccaggccgcc
caggctctccatttggccagtccacagcagcagtcagccatttaccacgcggggctcgca
ccaaccccacctgccatgacccctgcctccaatacgcagtctccacagaatagtttccca
gcagcacaacagaccgtctttacaatccatccttctcatgttcagccggcatacaccaat
cctccccacatggcccacgtacctcaggctcatgtacagtcaggaatggttccttctcat
ccaactgcccatgcgccaatgatgctaatgacgacacagccacccggcggtccccaggcc
gccctcgctcaaagtgcactacagcccattccagtctcgacaacagcgcatttcccctat
atgacgcacccttcagtacaagcccaccaccaacagcagttgtaa
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