KEGG   Mirounga leonina (Southern elephant seal): 118018646
Entry
118018646         CDS       T07472                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
mlx  Mirounga leonina (Southern elephant seal)
Pathway
mlx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mlx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118018646 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mlx03041]
    118018646 (SF3A1)
Spliceosome [BR:mlx03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    118018646 (SF3A1)
 Complex B
    118018646 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    118018646 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 118018646
NCBI-ProteinID: XP_034873255
LinkDB
Position
Unknown
AA seq 793 aa
MPAGPVQAVPPPPPAATEPKQPTEEEASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFTKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNELPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPASKKLKTEDSLVPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAI
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggcggtgcctccgccgccgcccgcggccaccgagcccaaa
cagcccacagaagaagaagcttcttcaaaggaggattctaccccctccaagccagtggtg
ggaattatttatcctcctccagaggtcaggaatatcgtcgacaagactgccagctttgtg
gccagaaacggacctgaatttgaagctaggatacgacagaatgagatcaacaatcccaag
tttaacttcttgaaccctaatgacccttaccatgcctactaccgccacaaggtcagcgag
ttcaaggaggggaaggctcaggagccctccgctgccatccccaaggtcatgcagcagcag
cagcaggccacccagcagcagctgccccagaaggtccaagcccaggtgatacaagagacc
attgtgcccaaagagccccctcctgagtttgagttcatcgcagaccccccctccatctca
gcgtttgacctggatgtggtgaagctgacggctcagtttgtggccaggaatggccgccag
tttctgacccaactgatgcagaaagagcagcgcaactaccagtttgacttcctccgcccg
cagcacagcctcttcaactactttacgaagctggtggagcagtacaccaagatcttgatt
ccgcctaaaggcttatttacaaagctcaagaaagaggctgagaaccctcgagaagttttg
gaccaggtgtgttaccgggtggagtgggccaagttccaggagcgagagagaaagaaggaa
gaagaggaaaaggagaaggagcgggtggcctatgcacagattgactggcatgattttgtg
gtggtggaaacagtggatttccaacccaatgagcaagggaatttccctccccccaccacc
ccagaggaactgggggcccgaatcctcattcaggagcgctacgagaagtttggggagagt
gaagaggttgagatggaggtcgagtctgatgaggaggacgagaaacaggagaaggcggag
gagcctccttcgcagttggaccaggacacccaagtgcaagacatggatgagggttcggac
gatgaagaagaagggcagaaagtgcccccacccccagagacacccatgccgccgcctctg
cccccgactccagaccaggtcattgttcggaaggactatgaccccaaagcttccaagccc
ctgcctccagcccctgctccagatgaatatcttgtgtctcctattacgggggagaagatc
cctgccagcaaaatgcaggaacacatgcgcattgggcttctcgatccccgctggctagag
cagcgagaccgctccatccgtgagaagcagagcgacgatgaagtgtatgcaccaggtctg
gatattgagagcagcttgaaacagttggctgagcggcgtactgacatcttcggtgtagaa
gaaacagccatcggtaagaagatcggtgaggaggagatccagaagccagaggaaaaggtg
acctgggacggccactcaggcagcatggcccggacccagcaggctgcccaggccaatatt
accctacaggagcagattgaggccatccacaaggccaagggcctggtgccagaggatgat
accaaagagaagattggccccagcaaacccaatgagcttccccagcagccaccacctccg
tcttcagccaccaacattcctagctctgccccaccaattacctctgtgccccggccaccc
gcgatgccgcctcctgttcgtaccacagttgtgtctgcagtacctgtcatgccccgcccc
ccgatggcatcagtggtccgactacccccaggctcagtgattgcccccatgccacccatc
atccatgcacccaggatcaacgtggtgcccatgcctccctcggcccctcctatcatggca
ccccgcccaccccccatgattgtgccaacagcatttgtacccgctccacctgtggcacct
gtcccagctccagccccgatgccccctgtccaccccccgcctcccatggaggatgagcct
gcctccaagaaactgaagacagaggacagcctcgtgcctgaagaggagttcctacgcaga
aacaagggtccagtgtccatcaaagtccaagtgcccaacatgcaggataagactgaatgg
aaactgaatggacaagtgctggtcttcacactcccgctcacagaccaggtctccgtcatc
aaggtgaagattcatgaagccacgggtatgcctgcagggaaacagaagctgcagtatgag
ggcatcttcatcaaggattccaactccctggcttactacaacatggccaatggcgccatc
atccacctggccctcaaggagagaggcgggcggaagaaatag

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