Mirounga leonina (Southern elephant seal): 118019155
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Entry
118019155 CDS
T07472
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mlx03036
]
118019155 (HFM1)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118019155 (HFM1)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118019155 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
Hfq
Motif
Other DBs
NCBI-GeneID:
118019155
NCBI-ProteinID:
XP_034873945
LinkDB
All DBs
Position
Unknown
AA seq
1484 aa
AA seq
DB search
MLKSNDSLFSLDTLFFEKQDEAENYPDNEKSLDWFLPPAPLISEIPDTQALEEEIGSHKL
LGQEERPKMLPSSLKITNENTNYISRTQKFQFAFSSNKYEAGDLNLGGAGNNDLSHVPGK
LTYGSSQKYKNHIGSEIAPENSIPDNTKLVNFAEDKGESISAFRKRLFKISDNIREGVNS
NDSTNLDSPIGSVKIAPTEMNKGESWKCSSSKQKHQYSDINMFTASNTFSASEIREDIFK
APTFSVASQPHEVQGVTENDLDSLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDR
NFVICAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVYMAPIKALCSQRFDDWKEKFGPI
GLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVKLVRLFLIDEVHVVK
DENRGPTLEVVVSRMKTVQSLSPTSENSSTVIPMRFVAVSATIPNAEDIAEWLSDGERPA
VCLKMDEKHRPVKLRKVVLGFPCRSNQTEFKFDLTLNYKIASVIQTYSDQKPTLVFCATR
KGVQQAASVLVKDAKFIMAVEQKQRLQKCAYSVRDSKLRDILIHGVAYHHAGMELLDRKV
VEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGR
PQFDTTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALE
WIRSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLKNLNDLSSLDLITMDEDVNFKP
TEAGRLMAWYYITFETVKKFCTISGKETLLDLVTMIASCKEFADVQLRINEKKTLNTLNK
DPNRVTIRFPMEGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTAKIFRNGSRITRWLSD
FVAVQEKKFAVLLNSLILAKCFRCKLWENSLHISKQLEKIGITLSNAMVNAGLTSFKKIE
ETDARELELILNRHPPFGTQIKETVMYLPKYELEVEQIARYSDTMAEILVTIILRNFEQL
QTKRTAPDSHYVTLIIGDADNQLVFKHKIMDSILLKAGNWTKKIDVKRAFKSEDLSLNLI
SSEYVGLDIQQKFTVFYLGPKRLGSQIIMRKKSETEISRSKHSNRSTVSGPNKGMIACKK
PGNRECNHHCKNKHTCGHDCCKTGVAQKSEMKEPTISSYLSDLRNRNAVSSLPPVKRLKM
QMNKSRSVDLKEFGFTPKPSLPSISRSECLNIPELSIMEQRDQREISAKVQQEPSEYQDK
DFSRWNYPTTSDEKAPQTVLFNRHLNASGNQNLTDMDKNNASFSEVLNVNFELGDEIWDD
FDDENLLEVTSFSASTEKTKRSGFGNTLCSSTRGSKIFLQESKSKFQGEMAKSFVSSPEK
PDIYLSKSPVFKFDASSLKKLPQQAGNANIVHLQERKQQSLSPEIEKLCFTHSEKIPNSS
HFVKKVDFFIRNSECKEEIDFSRYHPDDEADEMKSFLGIFDGIF
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcaaatgactccttgttttctttggatactttgttttttgaaaaacaagat
gaagctgaaaactatccagacaatgaaaaatcattggattggtttctcccacctgctccg
ttgatttcagaaattccagatactcaggcattagaggaggaaataggaagtcataaactg
ttaggtcaggaagagaggccaaaaatgttaccatcaagtttaaagataactaacgaaaac
acaaattatatttcacgaacacaaaaattccaatttgccttttcctcaaataaatatgaa
gcaggtgatctgaatttaggaggagcaggtaacaatgacttatcacatgttcctggcaag
ctgacatatggttcttctcagaaatacaaaaatcacattggcagtgagatagcacctgag
aacagtattccagataatacaaaattagttaattttgcagaagataaaggagagagcata
tcagccttccgaaaaagattatttaaaatatctgacaatatacgtgagggtgttaactct
aatgacagtacaaacttggactctcctattggctcagtgaaaattgccccaacagaaatg
aacaaaggggaatcatggaaatgtagcagtagtaagcagaaacatcaatattcagacatt
aacatgtttacagcaagcaatactttttctgcttctgaaatcagagaagacatattcaaa
gcaccaactttttcagttgcatcccagcctcatgaagttcaaggggtaacagaaaatgat
ttagattccttgaaggctgtcacagaaatcccagcgaaatttagaagtattttcaaggaa
ttcccatatttcaactatatacagtccaaagcctttgatgatcttctttacacagatagg
aattttgtgatttgtgctccaactggttctgggaaaactgtagtgtttgaactagctata
acaagattattaatggaagtcccattgccatggtcaaacattaaaattgtttacatggca
ccaataaaagccctgtgtagtcagcgttttgatgattggaaagaaaaatttggaccaata
ggattgaattgtaaagaactcactggagatacagtaatggatgacctatttgagattcag
catgcccatattattatgacaactccagaaaaatgggatagcatgactagaaaatggaga
gacaactctttggtcaagctggttagactgtttctcattgatgaggtacatgttgtaaaa
gatgaaaatcgtggaccaactcttgaagttgtagttagcagaatgaaaactgtacagtct
ttatctcctacttctgaaaatagcagcacagttattccaatgagatttgtagctgtatct
gcaacaattccaaatgctgaggatattgcagaatggctttcagatggtgaaagacctgcg
gtatgtctgaaaatggatgagaaacacaggccagtgaaacttcggaaagtggtccttgga
tttccctgcagaagtaaccaaaccgaatttaagtttgatttaaccctcaactacaaaatt
gccagtgttatacaaacatactctgatcagaaacccacacttgtgttttgtgcaacaaga
aaaggtgtacaacaggctgcttctgttcttgtgaaagatgctaaatttattatggctgtg
gaacagaaacagaggttacagaagtgtgcatattccgtaagagattcaaaactgagagat
atcttaatacatggtgttgcttatcatcatgctggtatggagctgttagatagaaaagta
gttgaaggagctttcactgttggagatctaccagttctttttactaccagtactttagct
atgggagtaaatttgcctgctcacctagtagttataaaatctacgatgcattatgctgga
ggaatgtttgaagagtatagtgaaacagatattctacagatgattggtagagctggtcga
cctcaatttgatactacagctactgcagttattatgactcggttaagtacaaaagagaag
tatattcagatgttagcttgtagtgacactgtagaaagcagtttacacagacatcttatt
gaacatttaaatgcagagatagtgttacataccatcacagatgtgaatattgctttggaa
tggatacgatcaactttgctttacatcagagccttgaaaaatccatctcattatggtttt
gcatctggattgaacaaagatggaattgaagcaaaattacaagaattatgtttgaagaat
ctgaatgatttatcatctctggacttgataacgatggatgaagatgttaatttcaaacca
actgaggcaggaagattgatggcttggtattacattacatttgagacagtgaagaaattt
tgtaccatcagtggaaaagagactttattagatctggtcacaatgatagccagctgcaag
gaatttgcagatgtgcagttaaggataaatgaaaagaaaacactgaatactttgaacaaa
gatccaaatcgggtaactatcagatttccaatggaaggaagaattaaaacaagagaaatg
aaagtaaattgtcttattcaggctcagctaggatgcattcccattcaagactttgctttg
acacaagataccgcgaagattttcagaaatggctcacgaattacaagatggttgtcagat
tttgtggctgttcaagaaaagaagtttgctgtgttattgaacagtttgatattagctaaa
tgttttagatgcaaactttgggaaaactctctacatatatccaaacagctggaaaaaatt
ggtataacattgtcaaatgcaatggtaaatgcaggtttgacctcctttaaaaaaatagaa
gaaacagatgcaagggaacttgaactgattttaaatagacaccccccttttggaacacaa
ataaaagaaacagtgatgtatctaccaaaatatgaacttgaagtggaacagattgcaaga
tatagtgataccatggcggaaatattagtgaccattatattaagaaactttgaacagcta
caaactaaaagaacagcaccagattctcactatgttaccttaatcataggtgatgcagat
aatcagctggtttttaagcacaaaattatggattctattttgctaaaagctggaaattgg
actaaaaagattgatgtgaagagagcttttaaatctgaagatcttagcttaaatctaatt
agttctgaatatgttggacttgatattcagcagaaatttacagtcttttacttaggaccc
aagaggcttggaagtcaaataattatgcgaaaaaaatcagaaacagagatttcccgttcg
aaacattcaaatagatctacggtatcaggacccaataaaggaatgattgcttgcaaaaaa
cctgggaaccgagaatgtaatcatcactgtaaaaataaacatacatgtggacatgactgc
tgtaaaactggagttgcacaaaagtcagaaatgaaagagccaacaatctcttcatattta
tccgatttaagaaacaggaatgctgtttcatcacttcctccagttaaacgtctcaagatg
caaatgaataaatctcgaagtgtggaccttaaagaatttggttttactccaaaaccttct
cttcccagtatatcaaggtcagagtgtttaaacatacctgaattgtctataatggagcag
agggatcagcgtgaaatcagtgcaaaagttcaacaagaaccatcagaatatcaagacaaa
gatttctctagatggaactatcctacaacttcagatgagaaagcccctcaaacagtgcta
ttcaacagacatcttaatgcatctggaaaccagaatttgacagatatggataaaaataat
gcttcattctcagaagttttgaatgtgaactttgaattgggagatgaaatttgggatgat
tttgatgatgagaacttattagaagtgaccagtttttcagccagtactgagaagacaaaa
agatcaggatttggaaacactttgtgttcaagtaccaggggaagtaagatattcctccaa
gagtcaaagagcaaattccaaggagaaatggcaaaaagttttgtttcatcacctgagaag
ccagatatttacttatcaaaatctcctgtgttcaagtttgatgcatcttccttgaaaaaa
ttacctcaacaagctggaaatgcaaatattgtacatttacaagaaagaaaacaacaaagt
ctgtcaccagaaattgaaaagttgtgctttactcactctgaaaaaataccaaattcttca
cattttgttaagaaagtggatttctttattagaaacagtgaatgtaaagaggaaattgat
ttcagtaggtatcatcctgatgatgaagctgatgaaatgaaatcttttctgggaatattt
gatggtattttctaa
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integrated database retrieval system
