Mirounga leonina (Southern elephant seal): 118019391
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Entry
118019391 CDS
T07472
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03013
Nucleocytoplasmic transport
mlx05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118019391 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118019391 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118019391 (NDC1)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118019391 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
118019391
NCBI-ProteinID:
XP_034874404
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MATAASRPCDGGSRDILWRVLGWRIVASIIWSVLLLPICTTVFIIFSSIDLFHPIRWLSD
SFSDLYSSYVIFYLLLLSVVEVIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQLMHSFV
HAAMGMLVAWCAAVITKGQYSFLVVPCTGTESLNSPAAQTCLNEYHLFFLLAGAFMGYSY
SLLYFINNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLIRNFCIVYYFLGHIPKA
WISTAMDLQIDEQFHRPLDTVRGLLNLSLLYHVWLCGVFLLMTWYISWILFKIFATEAHL
FPVQPPFSEESDECLPKVLNSSPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPH
NWTAISRECLNLLNDMTQKLVLYQEAAATNGRMVSSYSVEPKKSNSPEETTFQTPKSSQL
PRSSVPPLVKTSLFSSKLSTPDVGSPLRSPFGSSVVNRMAGIFDVNTCYGSPQSSQLIRR
GPRLWTSASDQQMTEFSNPSPSTSVSAEGKTARQPSMIYSWIQNKREQVKNFLSKRVLIM
YFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQE
AVDKYFKLPHASSKPPRISGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASA
EHQKRLQQFLEFKE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggccacggctgcgagtcggccctgcgacggcgggtcgcgggacatcttgtggcgcgtt
ttgggctggaggatagttgcaagtattatctggtcagtgctgcttctacccatctgtacc
acagtatttataatcttcagcagcattgatttatttcatcctattcggtggctctctgat
tctttcagtgatctgtatagttcctatgtaatcttttacctcctgctgctgtcagtggta
gaagtaataataagtatttttaatgtggagttctatgcagttgtgccttccattccctgc
tccagactggcactgatagggaagatcattcaccctcagcagctcatgcactcatttgtc
cacgctgcaatggggatgctggtggcttggtgtgctgcggtgataaccaagggtcaatac
agttttcttgtggttccctgcactggtactgagagtttaaatagccctgctgcacagacc
tgcttaaatgagtatcaccttttttttctactggctggagcgtttatgggctacagctat
agtctcctgtattttattaacaacatgaactatctgccatttcccatcatacagcaatac
aagttcttacgcttcaggagatctctgctcttgttagttaagcatagttgtgtggaatca
ctgtttctgattagaaatttctgcatcgtgtattattttcttggccatatccccaaagct
tggattagcactgcgatggaccttcagatagatgagcagtttcacaggcctcttgacact
gtgcgtggcctcttgaatctctcattactctaccatgtctggctgtgtggtgtctttctt
ctgatgacttggtatatctcatggatactcttcaaaatctttgccacagaggctcatctg
ttccctgttcagccaccattttcagaagagtcagatgaatgcctcccgaaggttttgaac
agcagtcctcccctcatcataaagtatttggccttgcaggacctgatgttgctttctcag
tattctccttcacgaagacaggaagtttttagccttagccaaccaggtggacatccccac
aattggacagccatttcaagggagtgtttgaatcttttaaacgatatgactcagaaactg
gttctctaccaagaagccgctgctacgaatgggagaatggtgtcctcatactccgtggaa
cccaagaaatcgaattctccagaagaaactacttttcagaccccgaaatctagtcagcta
cctcggtcttcagtgccaccattagttaagacatcactgttttcctccaaattatctacg
cctgatgttggaagtcccctcagaagcccgtttggctctagtgtagtgaatcggatggct
ggaatttttgatgtaaatacctgctatgggtcccctcaaagttctcagctaataagaaga
gggccaagattgtggacttctgcttctgatcagcaaatgactgaattttctaatccttct
ccatctacctctgttagtgctgagggtaagacagcgagacaacccagtatgatttattca
tggattcagaataaacgtgaacaggttaagaatttcttatcaaaacgggtgctgataatg
tattttttcagtaagcacccagaggcttctattcaggctgttttttcagatgcccaaatg
catatttgggcattagaaggtctgtctcacttagtagcagcatcatttactgaagataga
tttggagttgtccagactacactaccagctattcttaataccttgttgacgctgcaagag
gcagtcgacaagtacttcaagcttcctcatgcttccagtaaaccacctcggatttcagga
agccttgtggacacttcttataaaacattaagatttgcatttagagcatcactaaaaact
gccatctatcgaataactactacatttggtgaacatttgaatgctgtgcaagcatctgca
gaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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