Mirounga leonina (Southern elephant seal): 118019619
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Entry
118019619 CDS
T07472
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04514
Cell adhesion molecule (CAM) interaction
mlx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118019619 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118019619 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mlx00535
]
118019619 (SDC3)
Proteoglycans [BR:
mlx00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
118019619 (SDC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
118019619
NCBI-ProteinID:
XP_034874893
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MRVSVVTLGPSGLLASGAELCARLCPPQAQRWRSENFERPVDLEGSGDDDSFPDDELDDL
YSGSGSGYFEQESGIETAMRFSPDVAMAVSTTPAVLPTVDIQPVGTPLEELPSEHPTPEP
ATSPPVVTEVPGEPSQRTTTISTPTATTAATTAEALTVATVPATVATAAPSLPAAPPSTA
TPSVIRTTGVQRLLPLPLTTAATAQATTPAAPSPPTTVAILDTEAPTPRMVSTATSRPRA
LPRPATTQEADVPEKSTLPLGTTAPGPTEVAQTPTPESVLTTIRDEPEVPVSGGPSGDFE
LPEEETTQPDTANEVVAVGGAAAKPSPPPGTLPKGVRPGPGLLDNAIDSGSSAAQLPQKS
ILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYTLEEPKQASVTYQKPDKQE
EFYA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgtctgttgtcactctgggcccatccgggctgctggcctcaggtgctgagctc
tgtgcccgactctgtcctccccaggctcagcgctggcgcagcgagaacttcgagaggccc
gtggatctcgagggctctggggatgacgactccttccccgatgatgagctggatgacctc
tactcagggtcgggctcaggctacttcgagcaggagtcgggcatcgagacggccatgcga
ttcagcccggatgtggccatggcagtgtcgaccacacccgcagtgctgcctaccgtggac
atccagcctgtgggcaccccgttggaagagctcccctctgagcaccccaccccggagccg
gccaccagcccccccgtggtgacagaggtcccaggagagcccagccagagaaccaccacc
atctccactcccacggctaccactgccgccacgactgcggaggccctgactgtggccaca
gtgcccgccacggtggccaccgccgcccccagcctccccgcggcccccccttccacggcc
accccctccgtcataaggaccaccggcgtgcagaggcttctgcctcttccactgaccacg
gcagccacggcccaggccaccaccccagcagcgccctcacctcccaccacggtggccatc
ttggacacagaggccccaacgcccaggatggtcagcacagctacctccaggccaagggcc
cttcccaggccagctaccacccaggaggctgacgtccccgagaagagcaccttgcccctg
gggaccactgcccctggacccacggaggtggctcagaccccaactccggagtccgtcctg
accacgatccgggatgagcccgaggtgcccgtgagcggggggcccagcggggactttgag
ctgccagaggaggagaccacacagccagacacagccaatgaggtggtggccgtgggcggg
gctgcagccaagccgtcacctccgcctgggacgctgcccaaaggtgtgcgcccaggcccc
ggcctcctggacaatgccatcgactcaggcagctcggctgctcagctgcctcagaaaagc
atcctggagcggaaggaggtgctcgtagctgtgattgtaggcggggtggtgggcgccctg
ttcgctgccttcctggtcacgttactcatctaccgcatgaagaagaaggatgagggaagc
tacacactggaggagcccaagcaggcgagcgtcacgtaccagaagcctgacaagcaggag
gagttctacgcctag
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