Mirounga leonina (Southern elephant seal): 118019805
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Entry
118019805 CDS
T07472
Symbol
PTAFR
Name
(RefSeq) platelet-activating factor receptor isoform X1
KO
K04279
platelet-activating factor receptor
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04020
Calcium signaling pathway
mlx04080
Neuroactive ligand-receptor interaction
mlx05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118019805 (PTAFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118019805 (PTAFR)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
118019805 (PTAFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
mlx04030
]
118019805 (PTAFR)
G protein-coupled receptors [BR:
mlx04030
]
Rhodopsin family
Others
Platelet activating factor
118019805 (PTAFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
CitMHS
DUF1275
PsiE
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
118019805
NCBI-ProteinID:
XP_034875238
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MLSVAPISPSACCHSLDHCSCCFSDSTEARSADRRTLRSCCCWGHSACSAFPDSGATGFY
HQLPLPTMATGANNSSHVDSEFRYTLFPIVYSIIFVLGIIANSYVLWVFACLYPSKKLNE
IKIFMVNLTVADLLFLVTLPLWIIYYHNQGNWILPEFLCNLAGCFFFINTYCSVAFLAVI
TYNRFQAVTQPIKTAQDTTRKRGFSVSLVIWVAIVAAASYFFILDSTNVEPSKTGSGNIT
RCFEHYEKGSVPVLIIHIFLVFSFFLVFLIIFFCNLVIIRRLLMQPVQLQHNAEVKRRAL
WMVCTVLAVFIICFVPHHIVQLPWTLAELGFQNSSFHQAINDAHQVTLCLLSTNCVLDPI
IYCFLTKKFRKHLIEKFYSMRSSQKCSRATLETGTDVVMPLNHVPVHSLKK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgctctcagtggcccccatctctccctcagcctgttgccactctttagaccactgttcc
tgctgtttctcagatagcacagaggctcggtctgcagacagacggacactcagatcctgc
tgctgctggggccactcagcctgctcagccttccctgattcaggcgcaacaggattctac
caccagctgccccttccaaccatggcgacaggggcaaataattcctctcatgtggactct
gagttccgatataccctcttcccgattgtttacagcatcatctttgtgctggggatcatc
gccaacagctatgtgctatgggtctttgcctgcctgtacccttccaagaaactcaacgag
ataaagatcttcatggtgaacctcaccgtggctgacctgctcttcttggtcaccctgccc
ctgtggatcatctactaccacaaccagggcaactggattctccccgaattcctgtgcaac
ctggctggctgcttcttcttcatcaacacctactgctcagtggccttcctggctgtcatc
acttacaaccgtttccaggcagtgacccagcccatcaagacagctcaggacaccacccgc
aagcgtggtttctctgtgtccctggtcatctgggtggccattgtggctgcagcatcctac
ttcttcatcctggactccaccaacgtggagcccagtaagaccggctcaggcaacatcaca
cgttgctttgagcattacgagaagggcagtgtgcccgtcctcatcatccacatcttcctc
gtgttcagtttcttccttgtatttctcatcatcttcttctgcaacctggtcatcatccgc
aggctgctcatgcagccagtgcagctgcagcacaatgcagaggtcaagcgccgcgcgctg
tggatggtctgcacggtcttggctgtgttcatcatatgctttgtgccccaccacatcgtg
cagctgccctggaccctggctgagctgggcttccagaacagcagcttccaccaagccatc
aacgatgcccatcaggtcactctctgccttcttagcaccaactgtgttttagaccccatc
atctactgtttcctcaccaagaagtttcgcaagcacctcattgagaagttctatagcatg
cgcagcagccagaaatgctcccgggccaccttggagactggcactgatgtggtcatgccg
ctcaaccacgtccctgtccattccctcaaaaagtag
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