Mirounga leonina (Southern elephant seal): 118019833
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Entry
118019833 CDS
T07472
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03082
ATP-dependent chromatin remodeling
mlx04714
Thermogenesis
mlx05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118019833 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
118019833 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
118019833 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mlx03000
]
118019833 (ARID1A)
03021 Transcription machinery [BR:
mlx03021
]
118019833 (ARID1A)
03036 Chromosome and associated proteins [BR:
mlx03036
]
118019833 (ARID1A)
Transcription factors [BR:
mlx03000
]
Eukaryotic type
Helix-turn-helix
ARID
118019833 (ARID1A)
Transcription machinery [BR:
mlx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118019833 (ARID1A)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118019833 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
118019833
NCBI-ProteinID:
XP_034875290
LinkDB
All DBs
Position
Unknown
AA seq
2283 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGP
AVGPPQPLGKELQDGAESNGGGGGGGAGAGGGPGAEPDLKNSNGNAGPRPALNNNLTEPP
GGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGL
AALQSGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPG
SGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLT
SPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRSHH
APMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPSSGPQQGHGYPG
QPYGSQTPQRYPMAMQGRAQSAMGSLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQ
QQQPPYSQQPPSQNPHAQPSYQQQPQSQPPQLQTSQPPYSQQPSQPPHQQSPTPYPSQQS
TPQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQPQQTAYSQQRFPP
PQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSP
GVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAV
PAGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSG
GQMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAG
GQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETA
VAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNS
AGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEP
ERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELAT
NLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGS
GSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPT
FQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGGMRKAPGSDPFMSSGQGPNGGMGD
PYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPTLMPSNPDSGM
YSPSRYPPQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPA
KRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATAAA
ATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQGR
NDMTYNYTNRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPV
PPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVP
ASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLL
AESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQ
RTLLDPGRFSKASSPAPMEGEEEEDLLGPKLEEEEEEEVVENDEEMAFSGKDKAASESSE
EKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESK
TELLPTRPHVPCPPVTRKHVTAAEGTPGTTEQEGPPPDGPPEKRITATMDDMLSTRSSTL
TEEGAKNAEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCV
CVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVS
CNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDP
FSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPV
CREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPP
FEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLI
GQS
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcgggaggaggcggggggcgaggcggcggcg
gcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggcccc
gccgtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaatggg
ggtggcggcggcggtggagccggcgccggcggcgggcccggcgcggagccggacctgaag
aactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgccc
ggcggcggcggcggcggcagcagcgatggggtgggggcgcctcctcactcagccgcggcc
gccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtc
gccgccgcggcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctg
gcagcgctgcagagcggcggcggcggcgggggcctggagccctacgcggggccccagcag
aactcgcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagc
gcctaccccccgcccccccaggcctacgcgctgagctccccgagaggtggcactccgggc
tccggcgcggcggcggccgccggctccaagccgcctccctcctccagcgcctccgcctcc
tcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctca
gcggccggcgggggaaccccccagcccaccgccacccccaccctcaaccaactgctcacg
tcgcccagctcggcccggggctaccagggctaccccgggggcgactacggcggcgggccc
caggacgggggcgctggcaagggcccggcggacatggcctcgcagtgctggggggctgcg
gcggcggcggcggcggcggcagcagccgcctcgggaggggcccaacaaaggagccaccac
gcgcccatgagccccgggagcagcggcggcggggggcagccgctcgcccggaccccgcag
ccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggactaac
ccatactcgcagcaacagggaccttcatcaggaccgcagcaaggacatgggtacccaggg
cagccatatgggtcccagaccccgcagcggtacccgatggccatgcagggccgggcgcag
agtgccatgggcagcctctcttatgcacagcagattcctccttacggacaacaaggcccc
agtgggtatggtcagcagggccagactccatattacaaccagcaaagtcctcacccccag
cagcagcagccgccctactcccagcagccgccgtcccagaaccctcacgcccagccttcc
tatcagcagcagccgcagtctcagcccccacagctccagacttctcagcctccctattcc
cagcagccatcccagcctccacatcagcagtccccaactccatacccctcccagcagtcc
accccccaacagcacccccagagccagcccccttactcacagccgcaggcacagtctccc
taccagcagcagcaacctcagcagccagcctcctcgacgctttcccagcaggctgcgtac
cctcagccccagtctcagcagccacagcaaactgcctattcccagcagcgcttccctcca
ccacaggagttatctcaagattcatttgggtctcaggcatcctcagccccctcaatgacc
tccagtaagggagggcaagaagatatgaacctgagtcttcagtcaagaccctcaagcttg
cctgatctatctggttcaatagacgatctccccatggggacagaaggagctctgagccct
ggagtgagcacatcagggatttccagcagccaaggagagcagagtaatccagctcagtct
cctttctctcctcatacctcccctcacctgcctggcatccgaggcccctccccatcccct
gttggctctcccgccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtg
ccagcaggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcat
ccttccatgaaccaatcgagcattgcccaagatcgaggttacatgcagaggaacccccag
atgccccagtacagttccccccagcccggctcggccttatctccgcgtcagccttcgggt
ggacagatgcacacaggcatgggctcctaccagcagaactccatggggagctatggtccc
caggggagtcagtacggcccacagggaggctaccccaggcagccaaactataatgccttg
cccaatgctaactaccccagtgcaggcatggccggaagtatgaaccctatgggtgctgga
ggtcagatgcatgggcagcctggcatcccaccttatggcacactccctccagggagaatg
agtcatgcctccatgggcaaccggccttatggccctaacatggccaatatgccacctcag
gttgggtcagggatgtgtcccccaccagggggcatgaatcggaaaactcaagaaactgct
gtcgccatgcatgttgctgccaactctatccaaaacaggccaccaggctaccccaatatg
aatcaggggggcatgatgggaactggacctccctacggacaagggattaatagtatggct
ggcatgatcaaccctcagggacccccgtatcccatgggtgggaccatggccaacaattca
gcagggatggcagccagcccagagatgatgggccttggggacgtcaagttaactccagcc
accaaaatgaacaacaaggcagacgggacacccaagacagaatccaaatccaagaaatcc
agttcttctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcct
gagaggaagatgtgggtggaccgttatctggccttcacggaggagaaggccatgggcatg
acaaatctgcctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtg
aaggagattggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcgacc
aacctcaatgtgggcacctcaagcagtgctgccagctccttgaaaaagcagtatatccag
tgtctctatgcctttgagtgcaagattgaacggggagaagaccctcccccagacatcttt
gcagctgctgattccaagaagtcccagcccaagatccaacctccctctcctgcgggatct
gggtctatgcaggggccacagacacctcagtcaaccagcagttccatggcagaaggagga
gacctgaagccaccaactccagcatccacaccacacagtcagatcccccccttgccaggc
atgagcaggagcaattcggttgggatccaggatgcgtttcctgatggaagtgaccccaca
ttccagaagcggaattccatgactccaaaccctgggtaccagcccagtatgaatacctct
gacatgatggggcgcatgtcctacgagccaaataaggatccttatggcggcatgaggaaa
gctccagggagcgatcctttcatgtcctcggggcagggccccaacggcgggatgggagac
ccctacagccgagctgccggccctgggctgggaaatgtggcgatgggaccgcgacagcac
tatccctatggagggccgtatgacagagtgaggacggagcctggaataggacccgaggga
aacatgggcaccggagccccacagccgactctcatgccttccaacccagactcggggatg
tactctcccagccgctaccccccgcagcagcagcagcagcgacatgattcctatggcaat
cagttctccactcaaggcaccccttccggcagccccttccccagccagcagaccacaatg
tatcagcagcagcagcagaattacaaacggccgatggacggcacatacggccctcctgcc
aagcggcacgaaggggagatgtacagcgtgccgtacagcacggggcaggggcagccccaa
cagcagcagttgccccccgcccagccccagcctgccagccagcagcaagccgcccagcct
tcccctcagcaagatgtgtacaaccagtatggcaacgcctatcctgccacggccgccgct
gctactgagcgccgaccagcgggcggcccccagaaccagtttccattccagtttggccga
gaccgtgtctctgcgccccccggctccaatgcccagcagaacatgccaccgcagatgatg
ggcggccccatacaagcatcggctgaggtcgctcagcaaggcaccatgtggcaggggcgt
aatgacatgacctacaattacaccaacaggcagagcactggctctgccccccagggcccc
gcctaccatggcgtgaaccgaacagatgaaatgctgcatacggatcagagggccaaccat
gaaggcccgtggccttcccatggcacacggcagcccccatatggtccctctgcccccgtg
ccccccatgacaaggccccctccttccaactaccagcccccgccaagcatgcagaatcac
attcctcaggtatccagccccgctcccctgccccggccaatggagaaccgcacctctcct
agcaagtctccattcctacactctgggatgaagatgcaaaaggcaggtcccccggtacct
gcctcgcacatagcacctgcccccgtgcagccgcccatgattcggcgggacatcaccttc
ccacctggctccgtggaagcaacacagcccgtgttgaagcagaggaggcggctcacgatg
aaagacatcggaaccccggaggcatggcgggtaatgatgtccctcaagtctgggctgctg
gcagagagcacatgggcattagacaccattaacatcctgctgtatgatgacaacagcatc
atgaccttcaacctcagtcagctcccaggtttgctagagctccttgtggaatatttccga
cgttgcctgatcgagatctttggcattttaaaggagtatgaggtgggtgacccaggacag
agaacactactggaccctgggagattcagcaaggcgtctagtccagcccccatggagggg
gaggaagaggaagaccttctaggtcctaaactagaggaggaagaagaagaggaagtagtg
gaaaatgacgaggagatggccttctcgggcaaggacaaggcagcctcagagagtagtgag
gagaaactgattagtaagtttgacaagcttccagtaaagattgtgcagaagaatgacccg
tttgtggtggactgctcagataagcttgggcgcgtgcaggagtttgacagtggcctgctg
cactggcggattggtgggggggacaccactgagcatatccagacccactttgagagcaag
acagagctgctgccgacccggcctcatgtgccctgcccaccagtcacccggaaacatgtc
acagcagcagagggtactccagggacaacagaacaggagggccccccgcctgatggccct
ccggagaaacggatcacagccacaatggatgacatgttgtccacccggtctagcacgttg
accgaggagggagctaagaatgcagaggccaccaaggagagcagcaagtttccattcggc
atcagcccggcacagagccaccggaacatcaagatcctagaggacgaaccccacagtaaa
gacgagaccccactgtgtacccttctggactggcaggattccctcgctaagcgctgcgtc
tgtgtctccaataccatccgaagcctgtcgtttgtgcccggcaacgactttgagatgtcc
aaacacccggggctgctgctgatcctgggcaagctgatcctcctgcaccacaagcaccca
gagcggaagcaggcaccactgacttacgagaaggaggaggagcaggaccaaggggtgagc
tgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaacaccttggtc
acgctcgccaacatctcggggcagttggacctctccccgtaccctgagagcatttgcctg
cctgtcctggacggactcctacactgggcagtctgcccttccgctgaagcccaggacccc
ttctccaccctgggccccaacgccgtcctctccccccagagactggtcttggaaaccctc
agcaaactcagcatccaggacaacaatgtggacctgatcctggccacgccccccttcagc
cgcctggagaagttgtatagcaccatggtgcgcttcctcagtgaccgaaagaacccggtg
tgccgggagatggccgtggttctgctggccaacctggcgcagggcgacagcctggcagcc
cgcgccatcgccgtgcagaagggcagcatcggcaacctcctcggcttcctggaggacagc
cttgctgccacccagttccagcagagccaggccagcctgctccacatgcagaacccgccc
ttcgagccaactagtgtggacatgatgcggcgggctgcccgcgcgctgctggccctggcc
aaggtggacgagaaccactcggagttcacgctgtacgagtcacggctgttggacatctcg
gtatcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactgtttttgatt
ggccagtcatga
DBGET
integrated database retrieval system
