Mirounga leonina (Southern elephant seal): 118019872
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Entry
118019872 CDS
T07472
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03013
Nucleocytoplasmic transport
mlx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118019872 (SRRM1)
03015 mRNA surveillance pathway
118019872 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118019872 (SRRM1)
03041 Spliceosome [BR:
mlx03041
]
118019872 (SRRM1)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118019872 (SRRM1)
Spliceosome [BR:
mlx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
118019872 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
118019872
NCBI-ProteinID:
XP_034875352
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPGTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSS
PVTKRRSPSLSSKHRKGSSPSRSTREPRSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS
SPQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSIRRVSSSRSVSGSPEPAAKKPPA
PQSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPVRNSDPEGGGKKKKKKKDKKHKKDKKHK
KHKKHKKEKAVAAAAAAAVTPVAPAAPTATSAQEEPEAEPEPKKETESEPEDNLDDLEKH
LREKALRSMRKAQVSPQS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tccgcttttctagaactgaagaaagaagaaataaaacagagacaaattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggaaaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccggaaaagaaggaaaaaact
ccagagctcccagaaccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaggttcccaaacctgaacctgtaccagagcctaaagaaccttct
ccagagaaaaattccaaaaaagaaaaggagaaggagaagacccgaccaagatcacggtct
cgttccaaatcaaggtcccggacacggtctcgctctccttctcatactcgacctagacgg
cggcatagatcccgatcaagatcatactcacctagaaggaggccaagtccgagaaggcgg
ccatctcctcgaagaagaaccccaccaagacgaatgccacctccacccaggcatagaagg
agtagatctccagtgagacgaagaaggcgttcatcagcatccttgtctggaagtagctca
tcatcctcttcgtcccgttcccggtcaccgccaaagaagcctcctaagaggacatccagc
ccccctcgaaaaactcgtaggttatctccttcagcaagtcctcccaggcgaaggcatagg
ccatcacctccagcaactccaccgccaaaaactcgtcattccccaacaccccagcagtca
aaccgtacgagaaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtaaca
aaacataaaggtactgagaaaagagagtccccttcaccagcacctaagcctagaaaagta
gagttatctgaatcggaagaagataaaggtggcaaaatggccgcggcagattctgtgcag
cagagacgtcagtacagacgacagaaccagcagtcttcatctgattctggctcctcttct
tcctcagaagatgagcgacccaagaggtcccatgtgaagaatggtgaggtaggcaggcgg
cggagacattccccttcccggagtgcctctccatcacctcgaaagcgccagaaagagact
tcccctcggatgcaaatgggaaagcgatggcaatcgccagggactaaaagtggtagacgg
aggaggagtccctccccaccacctaccagaaggcgacgttctccttctcctgcccctcct
cctcgtaggcgcaggtcccccactccgccaccacgacgaaggactccttctcctcccccc
cgccggcgctcaccttccccaagaagatactctcctccgatacagaggagatactctcct
tctccacctccaaagagaagaacggcttctccccctccccctcctaaacgaagggcatca
ccatctccaccaccaaagcgtcgggtctcccattctccacctcccaaacaaagaagctcc
ccagtcaccaagagacgttcgccttcattatcatcaaagcataggaaagggtcttccccg
agccggtctacccgggagccccggtcaccacaaccaaacaaaaggcattcgccctcacca
cggcctcgagctcctcaaacctcctcaagtcctccacctgttcgaagaggagcatcatca
tcaccccaaagaaggcagtccccttctccaagtactaggcccattaggagagtctccagg
actccggaacccaaaaagacaaaaaaggctgcctcaccaagtcctcagtctataaggagg
gtctcgtcctcccgatctgtctcaggatctcctgagccagcagctaaaaaacccccagca
cctcagtctcctgtccagtcccagtccccctctaccaactggtcaccagcggtaccggtg
aaaaaggctaaaagccccacaccaagcccatctccggtgaggaactcagacccagaagga
ggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaag
aagcacaaaaaacacaagaaggaaaaggccgtggcggcagcggccgcagcagcagtgacc
cctgtggcccccgctgcccccacggccacgtcggcacaggaggaaccggaggcagagccc
gagcctaagaaggagaccgaaagcgagcccgaagacaacctcgacgacttagaaaagcac
ctgcgcgaaaaggcgctgaggtcgatgcggaaggctcaagtgtccccacagtcttag
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