Mirounga leonina (Southern elephant seal): 118020029
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Entry
118020029 CDS
T07472
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mlx04515
]
118020029 (CLSTN1)
Cell adhesion molecules [BR:
mlx04515
]
Cadherins
Cadherin related
118020029 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
FAM176
Toxin_R_bind_N
V_ATPase_I
EphA2_TM
PFF1_TM
SID-1_RNA_chan
Zip
SMP_2
Motif
Other DBs
NCBI-GeneID:
118020029
NCBI-ProteinID:
XP_034875742
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MLRRAAPALAPAAWLLLAGLLSGGGVWASRVNKHKPWLEPTYHGIITENDNAVLLDPPLI
ALDKDAPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSKEKLDCELQKDYTFTIQA
YDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYDSILRVEAVDA
DCSPQFSQICSYEIVTPDVPFAIDKDGYVKNTEKLNYGKEHQYKLTVTAYDCGKRRAAED
ALVKVSIKPTCTPGWQGWNNRIEYEPGMGPLALFPSVHLETCDESVASVQATVELETGHI
GKGCDRDTYSEKSLHQLCGAASGTAELLPSPSGSLNWTVGLPADNGHDSDQVFEFNGTQA
VRIPDGVVSVNPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSLYVHGCRLIFL
LRQDPLEEKKYKPAEFHWKLNQVCDEEWHHYVLNVEFPSVTLYVDGVSHEPFSVTEDYPL
HSSKVETQLVVGACWQEYPAFENDNETESVPMASTGGELHMTQYFRGNLAGLTVRSGKLA
DKKVIDCLYTCKEGLDLQVPEDSGRGVEIHTNPSQLALTLEGDDIGELDKAMQHVAYLNS
RQFPTPGIRKLRITSTVKCFNEAACISVPPVDGYVMVLQPEEPKISLSGVHHFARAASEF
ESAEGVFLFPELRIISTITREVEPEGEGDEDPTVQESLVSEEIVHDLDTCEVTVDGDELN
PAQESLEVDMARLQQKGIAVSASDLGMVFTGVDSMASYEEGLRLLRYRNWHSRSLLDRKF
KLVCSELNGRYVSNEFQVEVNVIHAASPMEHASHMAAQPQFVYPEHHAFVDLSGHNLASP
HPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRVAHQRTMRDQDAGKENEMDWDDSALTI
TVNPMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEHGDQQNVNRQQ
QLEWDDSTLSY
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgcgctgcgcccgcgctggccccggccgcctggctgctgctggccgggctg
ctgagcggcggcggggtctgggcctcgcgagttaacaagcacaaaccatggctcgagccc
acctatcatggcataatcacagaaaacgataatgcagtgcttctcgaccctcctctgatt
gccctggataaagacgcacctctgcgattcgcaggtgagatctgtggatttaaaattcac
gggcagaatgtcccctttgatgcagtggtagtggataagtccactggcgagggagtcatt
cgctcaaaagagaaactggactgtgagctgcagaaagactacacattcaccatccaggcc
tatgactgcggcaaggggccggacggcaccaatgtaaaaaagtctcataaggcaactgtc
catattcaggtgaacgatgtgaacgaatacgcaccggtgttcaaggagaagtcctacaag
gcaaccgtcatcgagggcaaacagtatgacagcatcttgcgggtggaggccgtggacgca
gattgctcccctcagttcagccagatttgcagctatgagatcgtcactccagatgtgccg
ttcgccatcgacaaagatggttatgtaaaaaacacagagaagctaaactacgggaaggag
caccagtacaagctgacggtcaccgcctatgactgcgggaagcggagagcagccgaagat
gccttggtgaaggtcagcatcaagcccacctgcaccccggggtggcaagggtggaacaat
aggatcgagtatgagcctggcatgggccctctggccctcttccccagtgtccacctggag
acatgtgatgaatccgtggcctcggtgcaggcgacggtggagctagagaccggccacatc
gggaaaggctgtgaccgggacacctattctgagaagtcccttcaccaactgtgtggtgct
gcgtctggcactgctgagctgctcccttccccgagcgggtccttgaactggactgtgggc
ctccccgctgacaacggccacgacagtgaccaggtcttcgagttcaatggcacacaggca
gtgaggatccccgatggggttgtctcggtcaacccgaaagagccttttaccatttctgtg
tggatgaggcacgggccttttggcaggaagaaggagacgattctctgtagttcagacaaa
accgacatgaaccgacaccattattcactctatgtccacggctgccggcttattttcctc
ctccgccaggatcctttggaagagaagaaatacaaacctgcagaattccactggaagttg
aatcaggtctgtgatgaggagtggcatcactacgtcctcaatgtggaattcccaagcgtg
actctgtacgtggacggagtttctcatgagcccttctcggtgaccgaagattacccgctt
cattcatccaaggtcgaaactcagctcgtggttggggcctgctggcaagagtatccagca
tttgaaaatgacaatgaaaccgagtctgtgcctatggcctcaacaggtggtgagctgcac
atgacccagtatttccgaggtaacctggccggcctgaccgtccgttccgggaaactcgct
gacaagaaggtgatcgactgtctttatacctgcaaagaagggctggacctgcaggtcccc
gaagacagcggcagaggcgtggagatccatacgaaccccagtcagttggcgttgaccttg
gagggagacgacatcggggagctggataaggccatgcagcatgttgcctacctgaactcc
aggcagttccccacaccggggatccgaaagctcagaatcaccagcacggtcaagtgtttc
aacgaggccgcctgcatctccgtgcccccggtggacggctacgtgatggtgctgcagccc
gaggagcccaagatcagcctcagtggcgtccaccatttcgctcgagcggcttccgaattt
gaaagcgcagaaggggttttccttttccctgagcttcggatcatcagcaccatcacgaga
gaagtggagcctgaaggggaaggggatgaggaccccacagtccaagagtcgctggtgtct
gaggagatcgtgcacgacctggatacctgtgaggtcacggtggacggggacgagctgaac
ccggcccaggagagcctggaggtggacatggcccgcctgcagcagaagggcattgcagtg
agcgcctccgacctgggcatggtcttcacgggtgtggacagcatggccagctacgaggag
gggctgcgtctcctgcgctatcggaactggcacagcaggtccctgctcgaccggaagttc
aagctcgtctgctccgagctaaatggccgctatgtcagcaacgagtttcaggtggaggtg
aacgtcatccacgcagccagccccatggagcacgccagccacatggcagcacagccccag
ttcgtctacccagagcaccatgccttcgtcgacctctcgggtcacaacctggccagcccc
cacccctttgcagttgtccccagcaccgccacggtggtgattgtggtgtgcgttagcttc
ctggtcttcatgatcatcctgggcgtgttccggatccgggttgctcaccagcgaaccatg
cgggaccaggacgccgggaaggagaacgagatggattgggacgactctgccttgaccatc
accgtaaaccccatggagacgtacgaggaccagcacagcagcgaggaggaggaggaagag
gaagaggaagaggagagcgaggatggggaggaggaggatgacatcaccagtgccgagtcg
gaaagcagcgaggaggaggagggggagcacggagaccagcagaacgtgaacaggcagcag
cagctggagtgggacgactcgaccctcagctactga
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