Mirounga leonina (Southern elephant seal): 118020349
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Entry
118020349 CDS
T07472
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mlx03036
]
118020349 (CHD5)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118020349 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
118020349
NCBI-ProteinID:
XP_034876146
LinkDB
All DBs
Position
Unknown
AA seq
1949 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGGLGGFDDYFPEEPVGLPKKKKSKKLKENR
SKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDE
DDNDDGCLKEPKSSGQLMAEWGLDDVEYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAVSPQQAPQPVPIR
KAKTKEGKGPGVRKKIKGSKDAKKKGKGRKVAGLKFRFGGISNKRKKGSSSEEDEREESD
FDSASIHSSSMRSEGSTALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDEDDEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPDMEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLV
KKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPVTPVPDVQSSKGGALASSAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPASPAHLLP
TPLGLPDKMEAQLGYMDEKELGVQKPKKPPEIQALPTSLDRVEGEDKHESSDGKERLEEM
EKAPPSPEQLPKEEVLPEKEKILDKLELSLIHSRGDGSDFRPDDAKVEEKEPLETQQNGD
KEEDEEGKKEDKNGRFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLL
AGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQ
LRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLE
ELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGNSQMYNN
NFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaagaagaagatgggggccttggaggctttgatgactatttc
cctgaggagcccgtgggccttcccaagaagaagaaatccaagaagctcaaggagaaccgg
tccaaagggaagcggaagaagaaagaggggagcaatgatgagctgtcagaaaatgaagag
gatctggaagagaagtcggagagtgagggcagtgactactcccctaataaaaagaagaag
aaaaagctcaaggacaagaaggagaaaaaagccaagcgaaaaaggaaggatgatgacgag
gatgataatgacgacgggtgtctaaaggagcccaagtcctcggggcagctgatggccgag
tggggcctggatgacgtggagtacctgttctcggaggcagactaccacacgctgaccaac
tacaaggccttcagccagttcctcaggccgctcattgccaagaagaacccgaagatcccc
atgtccaaaatgatgaccgttctgggagccaagtggcgggagttcagcgccaacaaccct
ttcaaggggagctcagcagcagcagctgcagcggcggtggccgcggccgtggagaccgtc
accatcgcccctccgctggccgtcagcccccagcaggcaccccagcctgtacctatccgc
aaggccaagaccaaggagggcaaggggccaggagtgaggaagaagatcaaagggtccaag
gatgcgaagaagaagggcaaggggagaaaggtagctgggctcaagttccgctttggaggg
atcagcaacaagaggaagaaaggctcctcgagtgaggaagatgagcgggaggagtcagac
ttcgacagcgccagcatccacagctcctccatgcgctctgagggctccacagccctgggg
aagaagagcaagaggcggcgcaagaagaagaggattgacgatggtgatggctacgagacg
gaccaccaggactactgtgaggtgtgccagcagggcggggagattatcctgtgtgacacc
tgcccgcgggcctaccacctcgtctgccttgatccagagctggagaaggctcccgagggc
aagtggagctgtccccactgtgagaaggaggggatccagtgggagccaaaggacgacgag
gacgacgaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacgggggtgaactgctctgctgcgacgcgtgcccctcctcctaccacctg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgccccccgctgaaaggcaaagtccagcggatcctacactggaggtggacagagccc
cctgcccccttcatggtggggctgccggggcccgacatggagcctggtgtccccccaccc
aagcccctggagggcatcccggagagagagttcttcgtcaagtgggctgggctctcctac
tggcactgctcctgggtgaaggagcttcagctggagctataccacacggtcatgtaccgc
aactaccaaagaaagaacgacatggacgagccgccgccctttgactacggctctggcgat
gaggatggcaagagcgagaagaggaagaacaaggaccctctctatgccaagatggaggag
cgcttctaccgctacggcatcaagcccgagtggatgatgatccaccgcatcctgaaccac
agcttcgacaagaagggggatgtgcactacctgatcaagtggaaagacctgccctatgac
cagtgcacctgggagatcgacgacatcgacatcccctactatgacaacctgaagcaggcc
tactggggccacagggagctgatgctgggtgaggatgctaggctgcccaagaggctggtc
aagaagggcaagaagctgaaggatgataaacaggagaagccaccagacacacccattgtg
gatcccacggtcaagtttgacaagcagccttggtacattgactccacgggaggcacactg
cacccataccagctggagggcctcaactggctgcgcttctcctgggcccagggcacagac
accatcctggctgatgagatggggctgggcaagactgtgcagaccatcgtcttcctctac
tccctgtacaaggaggggcactccaaggggccctacctggtcagcgcgcccctgtccacc
atcatcaactgggagcgtgagtttgagatgtgggcacctgacttctatgtggtcacctac
acgggggacaaggagagccgctccgtgatccgggagaatgagttttcttttgaggacaac
gccattcggagtgggaagaaggtgttccgcatgaagaaagaagtgcagatcaaatttcat
gtcctgctcacctcctacgagctcatcaccatcgaccaggccattctgggctccatcgag
tgggcctgcctagtggtggacgaggcccaccggctcaagaacaaccagtccaagttcttt
agggtcttgaacagctacaagatcgattacaagctgctgctgacggggaccccccttcag
aacaacctagaggagctgttccatctcctcaacttcctgactccagagaggttcaacaat
ctggagggcttcctggaggagtttgccgatatctccaaggaagaccagatcaagaagcta
cacgacctgctggggccacacatgctgaggcggctcaaggctgatgtattcaagaacatg
ccggccaagaccgagctgatcgttcgtgtggagctgagccagatgcagaagaagtactac
aagttcatcctcacgcggaacttcgaggcactcaactccaaggggggtgggaaccaggtg
tcgctgctcaacatcatgatggatctgaagaagtgttgcaaccacccctacctcttcccc
gtggctgccgtggaggcccctgtcttgcccaatggctcctatgatggcagctccctggtc
aagtcttcaggcaagctcatgcttctgcagaagatgctcaagaagctgcgggacgaaggg
caccgtgtgctcatcttctcccagatgaccaagatgctggaccttctggaggacttcctg
gagtatgagggctacaagtatgagcggattgatggtggcatcactgggggcctccgacaa
gaggcgatcgacagattcaatgcccctggggcgcagcagttctgcttccttctctcgacc
cgggcggggggcctgggcatcaacctggccacagcagacaccgtcatcatctacgactcg
gactggaatccacacaatgacatccaggccttcagccgtgcccatcgcatcggacagaac
aagaaggtgatgatctaccgcttcgtgactcgggcctcggtggaggagcgcatcacacag
gtggccaagcgcaagatgatgctcacccacctggtggtacggcccggcctcggctccaag
tccggctccatgaccaagcaggagctggacgacatcctcaagttcggcacagaagagctc
ttcaaggacgacgtggagggcatgatgtctcagggccagaggccggtcacgcccgtccct
gatgtccagtcctccaaagggggagccctggcttccagcgccaagaagaagcatggcagc
accccgccaggcgacaacaaggacgtggaggacagcagtgtgatccactatgacgatgcg
gccatctccaagctgctggaccgaaaccaggacgccacggacgacacggagctgcagaat
atgaacgagtacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggacggc
gtggaggaggtggagagggagatcatcaagcaggaggagaacgtggaccccgactactgg
gagaagctcctgcggcaccactacgagcagcaacaggaggacctggcccgcaatctgggc
aagggcaagcgcgtccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggag
tggcaggacgagctctcagataaccagtccgaatattccattggctccgaggatgaggac
gaggactttgaggaaaggccagaagggcagagtggacggcgacaatccaggaggcagctg
aagagcgacagggacaagcccctgccacctcttctcgcccgtgtgggtggcaatatcgag
gtgctgggcttcaatgcccgccagcggaaggcctttctgaacgccatcatgcgctggggc
atgcccccccaggatgccttcaactctcactggctggtgcgggaccttcgagggaaaagc
gagaaggaatttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggcgct
gacggcgcagagaccttcgcggacggtgtgccccgtgagggcctctcgaggcagcacgtg
ctcacccgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgagcacgtt
aacgggaagtacagcaccccggacttgatccccgaagggcccgagggcaagaagccaagc
gaggtcatctcctcggaccccaacacgccagtgcccgccagccctgcccacctcctgccg
accccactgggcctgccagacaaaatggaagcccagctgggttacatggatgagaaggag
ctgggggttcagaagccaaagaagcccccagaaatccaggccctgccaacttccctggac
agagtggagggcgaggacaagcatgagagctcagatggcaaggagcggctggaggagatg
gagaaggccccgccatccccagagcagctgccgaaagaagaagtgcttccggagaaggag
aaaattctggacaagctggagctaagcttgattcacagcagaggggatggcagtgatttc
aggccagatgacgccaaagtggaggagaaggagccccttgaaacacagcaaaatggtgac
aaagaggaagatgaggaggggaagaaggaggacaagaatgggaggttcaaattcatgttc
aacattgcagacgggggcttcacagagctgcacacactgtggcagaatgaggaacgtgct
gctgtgtcctcggggaaaatctacgacatctggcaccggcgccatgactactggctgctg
gccggcatcgtgacgcacggctacgcccgctggcaggacatccagaatgacccgagatac
atgatcctcaacgagcccttcaagtctgagatccacaagggtaactacttggagatgaag
aacaagtttctggcccgcaggttcaagctgctggaacaggcgctggtcatcgaggagcag
ctccggagggccgcgtaccttaacatgacccaggaccccaaccaccccgccatggccctc
aacgcccgcttggctgaggtggagtgccttgctgagagccaccagcacctgtccaaggag
tcccttgccgggaacaagccggccaatgccgtcctgcacaaggtcctgaaccagctggag
gagctgctgagtgacatgaaggcggatgtgacgcgcctgccctccatgctgtcccgcatc
cccccggtggctgcccgcctccagatgtcggagcgcagcatcctgagccgcctgaccaac
cgagccggtgaccccaccatccagcagggcgctttcggcaactcccagatgtacaacaac
aactttgggcccaacttccggggccctggaccgggagggattgtcaactacaaccagatg
cccctggggccctatgtgaccgatatctag
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integrated database retrieval system
