Mirounga leonina (Southern elephant seal): 118020776
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Entry
118020776 CDS
T07472
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain
KO
K06236
collagen type I alpha
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04151
PI3K-Akt signaling pathway
mlx04510
Focal adhesion
mlx04512
ECM-receptor interaction
mlx04518
Integrin signaling
mlx04611
Platelet activation
mlx04820
Cytoskeleton in muscle cells
mlx04926
Relaxin signaling pathway
mlx04933
AGE-RAGE signaling pathway in diabetic complications
mlx04974
Protein digestion and absorption
mlx05146
Amoebiasis
mlx05165
Human papillomavirus infection
mlx05205
Proteoglycans in cancer
mlx05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118020776 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118020776 (COL1A2)
04518 Integrin signaling
118020776 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118020776 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118020776 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
118020776 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
118020776 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
118020776 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
118020776 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
118020776 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
118020776 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
118020776 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
118020776 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mlx00536
]
118020776 (COL1A2)
Glycosaminoglycan binding proteins [BR:
mlx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118020776 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
118020776
NCBI-ProteinID:
XP_034876481
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQSLQEATARKGPAGDRGPRGERGPPGPPGRDGDDGIPG
PPGPPGPPGPPGLGGNFAAQYDPGKGVGLGPGPMGLMGPRGPPGASGAPGPQGFQGPAGE
PGEPGQTGPAGSRGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGI
RGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGS
VGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGVSGPVGPPGN
PGANGLAGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGN
KGEPGSAGPQGPPGPSGEEGKRGPNGEAGSTGPSGPPGLRGGPGSRGLPGADGRAGVMGP
PGPRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGP
IGPSGARGEPGNIGFPGPKGPAGDPGKAGEKGHAGLAGARGAPGPDGNNGAQGPPGPQGV
QGGKGEQGPAGPPGFQGLPGPAGTAGEAGKPGERGLPGEFGLPGPAGPRGERGPPGESGA
AGPSGPIGSRGPSGPPGSDGNKGEPGVLGAPGTAGPSGPGGLPGERGAAGTPGGKGEKGE
TGLRGEVGNPGRDGARGAPGAVGAPGPAGATGDRGEAGPAGSAGPAGPRGSPGERGEVGP
AGPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGSAGPSGPNGPPGPAGSRGD
GGPPGATGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGAHGP
PGFTGEKGPSGEPGTAGPPGTAGPQGLLGAPGILGLPGSRGERGLPGVSGSVGEHGPLGI
AGPPGARGPPGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPAGA
VGAPGPHGPVGPTGKHGNRGEPGPAGSVGSVGAAGPRGPSGPQGVRGDKGEPGDKGPRGL
PGLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGV
RGSQGSQGPAGPQGPPGPPGPPGPSGGGYDFGYEGDFYRADQPRSPPSLRPKDYEVDATL
KSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFST
GETCIRAQPENIPAKNWYRNSKVKKHIWLGETINGGTQFEYNAEGVTTKEMATQLAFMRL
LANHASQNITYHCKNSIAYLDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSK
KTNEWRKTIIEYKTNKASRLPILDIAPLDIGDADQEFRVDVGPVCFK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacgtcgtgcctagca
acatgccaatctttacaagaggcaactgcaagaaagggcccagctggagatagaggacca
cgtggagaaaggggtccaccaggcccaccaggcagagatggtgacgatggtatcccaggc
cctcctggtccacctggtcctcctggcccccctggtcttggcgggaattttgcagctcag
tatgatcctggaaaaggagttggccttggccctggaccaatgggtttgatgggacctcga
gggccacctggtgcgtctggagctcctggccctcaaggtttccaaggacctgctggtgag
cccggtgaacctggtcaaactggtcctgcgggttctcgtggtccacctgggcctcctggc
aaggctggggaggatggtcaccctggaaaacctggacgacctggtgagagaggagttgtt
ggaccacagggtgctcgtggtttccctgggactcctggacttcctggcttcaagggcatt
aggggacacaatggtctggatggattgaagggacagcccggagctccaggtgtgaagggt
gaacccggtgcccctggtgaaaatggaactccaggtcaaacaggagcccgtgggcttcct
ggtgagagaggacgcgttggtgcccctggtccagctggtgcccgtggaagtgatggaagt
gtgggtcctgtgggtcctgctggtcccattgggtctgctggccctccaggctttccaggt
gctcctggccccaagggtgaactcggacctgttggcaaccctggtcctgctggtcccgcg
ggtccccgcggtgaagtaggtcttccgggtgtctccggccccgttggacctcctggtaac
cctggagccaacggcctggctggtgctaagggtgctgctggcctgcccggtgtggctggg
gctcccggcctccctggaccccgcggaattcccgggcctgttggcgctgctggtgctact
ggggccagaggactcgtcggtgagcctggtccagctggttccaaaggagagagcggcaac
aagggtgagcccggctctgctgggccccaaggtcctcccggtcccagtggtgaagaagga
aagagaggccccaacggtgaagccggatccactggcccctctggacctcctgggctgaga
ggaggtcctggttctcgtggtcttcctggagctgacggcagagctggtgtcatgggccct
cctggccctcgtggtgcgaccggccctgctggtgtccgaggtcccaacggagattctggt
cgccctggagagcctggcctcatggggccccgaggttttcctggtgcccctggaaatgtt
ggcccagctggtaaagaaggtcccatgggcctccctggtattgacggcaggcctggtccg
attggcccatctggagcaagaggagagcctggcaacatcggattccctggacccaaaggc
cccgccggtgatcctggcaaagctggtgagaagggtcatgctggtcttgctggtgctcgg
ggtgctccaggtcctgatggaaacaatggtgctcaggggcctcctggaccacagggtgtc
caaggtggaaaaggtgaacaaggtcccgctggtcctccaggcttccagggtctgcctggc
cccgcaggtacagctggtgaagctggcaaaccaggagaaaggggtctccctggtgaattt
ggtctccctggtcctgctggtccaagaggggagcgtgggccccctggagaaagtggtgct
gctggtccttctggtcctattgggagccgaggtccttctggaccccctgggtccgatgga
aacaagggtgaacctggtgtgctcggcgctccgggcaccgcgggtccatcgggtcccggc
ggcctcccaggagagcggggtgctgccggcacacctggaggcaagggcgagaagggtgaa
actggtctccgaggggaagttggtaacccaggcagagatggtgcccgtggtgcccctggt
gctgtgggtgcccctggtcctgctggagccactggtgaccggggtgaagccggtcctgcc
ggttctgccggtcctgccggtcctcgtggtagccctggtgaacgtggtgaggttggtccc
gctggccccaatggatttgctggtcctgctggtgctgctggtcaacctggtgctaaagga
gagagaggaaccaaagggcccaagggtgaaaatggtcctgtcggtcccacaggccccgtc
ggatctgctggcccatctggtccaaatggtccccctggtcctgctggaagtcgtggtgat
ggcggcccccctggtgctactggttttcctggcgctgctggacggactggtcctcctggg
ccctctggtatcaccggccctcctggtccccctggcgctgctggtaaagaaggactccgt
gggcctcggggtgaccaaggtccagttggccgaacaggagaaactggcgcacatggtccc
cccggctttaccggcgagaagggtccctctggagagcccggtaccgctggccctcctggc
accgcaggtcctcaaggtctccttggtgctcctggcattctgggtctcccaggctctcga
ggtgaacgtggtctaccaggtgtttctggatctgtgggtgaacacggacctctcggcatc
gctggcccacctggggctcgtgggccccctggggctgtgggcgcaccgggagtgaacggc
gctcctggcgaagctggtcgtgatggcaaccctgggaacgatggccccccaggccgcgat
ggtcaacccggacacaagggagagcgcggttaccctggcaacattggtcctgctggcgct
gtgggcgcgcctggtcctcacggccctgtgggtcccactggcaaacacggaaaccgtggt
gaacccggtcctgctggttctgtgggttcagttggtgctgctggtccaagaggtcctagt
ggcccacaaggtgttcgaggtgataagggagagcctggtgacaaggggcccagaggtctt
cctggcttaaagggacacaatggactgcaaggtcttcctggtctcgctggtcaacatggc
gatcaaggtgcacctggttctgtggggcctgccggtcctaggggccctgctggtccttcc
ggccctgctggcaaggacggtcgcactggacatcctggtacagtcggccctgctggcgtc
cgtggctctcaggggagccaaggtcctgctggccctcaaggtccgcctggtcctcctggc
cctcctggcccgagtggtggtggctatgactttggttatgaaggggacttctacagggct
gaccagcctcgctcaccaccttctctcagacccaaggattatgaagttgatgctactctg
aaatccctcaacaaccagatcgagacccttcttactcctgaaggctctaggaagaaccca
gctcgcacatgccgtgacttgagactcagccacccagagtggagcagcggttactactgg
attgaccctaaccaaggatgcactatggatgctatcaaagtatactgtgatttctctact
ggcgaaacctgcatccgggctcaacctgaaaacatcccagccaagaactggtacagaaat
tccaaggtcaagaagcacatctggttaggagaaactatcaatggtggtacccagtttgaa
tataatgctgaaggagtgaccaccaaggaaatggccactcaactcgccttcatgcgcctg
ctggccaaccatgcctctcaaaacatcacctaccactgcaagaacagcattgcctacctg
gatgaggagactggcaacctgaagaaggctgtcattctgcaaggctccaatgatgttgaa
ctggttgccgagggcaacagcaggttcacctacactgttcttgtagacggctgctctaaa
aagacgaatgaatggagaaagacaatcattgaatacaaaacaaataaggcatcccgcctg
cctatccttgatattgcacctttggacatcggtgatgctgaccaagaattcagggtggac
gttggcccagtctgtttcaaatga
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integrated database retrieval system
