Mirounga leonina (Southern elephant seal): 118021588
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Entry
118021588 CDS
T07472
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03013
Nucleocytoplasmic transport
mlx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118021588 (UPF2)
03015 mRNA surveillance pathway
118021588 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118021588 (UPF2)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118021588 (UPF2)
mRNA cycle factors
P-body specific factors
118021588 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
118021588
NCBI-ProteinID:
XP_034877545
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MPAERKKPASMEEKETLLNNKEKDCGERRPVSSREKPKDEIKLTAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEEKKKQEEQAKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKDSNKDDSKEMKEPKDNKEVSNPEDLELELENLEINDDTLELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESLRQVHDLEREFLIKLGLVNDKDSKD
SMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaaactttactaaacaac
aaggaaaaagactgcggtgaaaggcggccagtgagcagcagggagaaaccaaaagatgag
atcaagcttactgccaagaaggaggttattaaggtccctgaagataaaaagaagaaactg
gaagaagataagagaaaaaaagaagacaaggaacgaaagaaaaaagaagaagaaaaggtg
aaggcagaggaagaattaaagaaaaaagaggaagaagaaaaaaagaaacatgaagaggaa
gagaaaaagaagcaagaagagcaggcaaaacgtcaacaagaagaagaagctgcccagttg
aaagagaaagaggaatcccttcagcttcatcaggaagcctgggaacgacatcagttaagg
aaggaacttcgtagcaaaaaccaaaatgctccagacagccggccagaggaaaatttcttt
agccgcctagactcaagtttgaagaaaaatactgcttttgtcaagaaactaaaaactatt
acagaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaagctgtagcttctattgtggaagcaaagctaaaaatatctgacgtgaactgt
gctgtgcacttgtgctctctctttcaccagcgttatgccgactttgctccatcacttctt
caggtttggaaaaaacattttgaagcgaggaaagaagagaaaacccctaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctttccttaatctatgaacagctaaaaaatattattaatgctgatcgggaatcc
catactcatgtttccgtggtgattagtttttgtcgacattgcggcgatgatattgctgga
cttgtgccacggaaagtgaagagtgctgcagagaagtttaatttgagttttcctcctagt
gagataattagtccagagaaacaacaacctttccagaatcttttaaaagaatactttaca
tctttgaccaaacacctgaaaagggaccacagggagcttcagaatactgagagacaaaac
aggcgtattctccattctaaaggggagctaagtgaagatagacataaacagtatgaggaa
tttgctatgtcatatcagaagctgctggcaaattctcaatccttagcagacctcttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagagcatgggcctggaatt
gatatctttacacctggtaagcctggagaatatgacttggaaggtggtatatgggaagat
gaagatgctcggaatttttatgagaacctcattgatttgaaagcttttgttccagccatc
ttgtttaaagataacgagaaaagttgtcagaataaagattccaacaaagatgattccaaa
gagatgaaagaaccaaaggataataaagaggtatcaaatcctgaggatttagaacttgag
ttggagaacctagaaattaatgatgataccttggagttagagggtggagatgaagctgag
gatctcacaaagaaacttctggatgagcaagaacaagaggatgaagaagccagcactgga
tctcatctcaagctcatagtagatgctttcctccagcagttgcccaactgtgtcaaccga
gatctgatagacaaggcagcaatggatttttgcatgaacatgaatacaaaagcgaatagg
aagaagttggtacgggcactctttatagttcccagacaaaggttggatttgctaccattt
tatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaa
acaaagaacaaaactgttcgttttattggagaattaactaaatttaagatgttcacaaaa
aatgatacattacattgtttaaagatgcttctgtcagacttttcccatcaccatattgaa
atggcatgtactctactagaaacatgtggaaggtttcttttcagatcaccagaatcacac
ctgaggaccagtgtacttttggagcaaatgatgagaaagaaacaagcaatgcacctcgat
gcaagatatgttacaatggtggagaatgcatattactactgcaacccacctccagctgaa
aaaacagtgaaaaagaaacgtcctcctctccaggaatatgtccggaaacttttgtacaag
gatctctccaaggttaccactgagaaggttttgagacagatgcgaaagttgccctggcag
gaccaagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtgaaatat
aatagtattcattgtgtagccaaccttttagcaggactggtcctctaccaagaagatgtt
ggaatccatgttgtggatggagttttagaagatattcgattaggaatggaggttaatcaa
cctaaatttaatcagagacgtatcagcagtgccaagttcttaggggaactttataattat
cgaatggtggaatcagctgttatttttaggactctttattcttttacttcatttggtgtt
aacccagatggctctccaagttcactagatcctcctgagcaccttttcagaattagacta
gtgtgcactattttggatacctgtggccagtactttgacagaggttccagtaaacgaaaa
cttgattgcttccttgtatactttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacaaaagaccatccatttcctattgacatagattacatgatcagtgatacactagaa
ctgctaagaccaaagatcaaactctgtaattctctggaagaatccctcaggcaggtacac
gacttggaacgagaattcttaataaaactaggcctagtaaatgacaaagactcaaaagat
tctatgacagaaggagaaaaccttgaagaggatgaagaagaagaagaaggaggagctgaa
acagaagaacaatctggaaatgaaagtgaagtaaatgaaccagaagaagaggagggttct
gataatgatgatgatgaaggtgaggaggaagaggaagagaatactgattaccttacagac
tccaataaagagaacgaaaccgatgaagaaaatactgaggtaatgattaagggaggtgga
cttaagcacgtaccttgtgtggaagatgaggacttcattcaagctctggataaaatgatg
ctggaaaatcttcagcaacgaagtggtgaatctgtcaaagtgcaccagcttgatgttgct
attcccttgcatctcaaaagccagctgaggaaagggcctccactcggtggtggggaggga
gaagcggagtctgcagacacaatgccgtttgtcatgttaacaagaaaaggcaataaacag
cagtttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcactggaaccag
caacaggcggaacaagaagagaggatgagaatgaaaaagctcacattagatatcaatgaa
cggcaagagcaagaagattatcaagaaatgctgcagtctcttgcccagcgcccagctcca
gcaaacaccaatcgggagcggcggcctcgttaccaacatccgaagggagcacctaatgcg
gatctaatctttaagactggtgggaggagacgttga
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integrated database retrieval system
