Mirounga leonina (Southern elephant seal): 118021662
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Entry
118021662 CDS
T07472
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mlx04121
]
118021662 (ZSWIM8)
Ubiquitin system [BR:
mlx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
118021662 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
118021662
NCBI-ProteinID:
XP_034877718
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCAQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFNWEEAYPLPGVTYSGTDRKLALCWARALPPRPGASRSGGLEESRERPRALPSEPAV
RPKEPGAKRKGLGEGVPSSQRGPRRLSAEGGDKALHKMGPGGGKAKALGGAGSGGKGPAG
GGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPPPGGSRGPSTFL
PEPPDTYEEDGGVYFSEGPEPPTASAGPRGLLPGEVCTRDDLPSTDESGNGLPKTKEAAT
AVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEVLFACAEAL
HAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFL
LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGPSEMS
TMRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNNEMPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRE
SQTHKPQTLSSFYSSSRPATASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPG
PTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS
SGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAR
EAATSCSAGGIRAAGEAGRGLPEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGP
GLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPA
FLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSV
HPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLAL
EMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEI
VMETLQRLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSAR
SAFCLTPMGMMQFNDILQNLKRSKQTKELWQRVSLEMTTFSP
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgcggaatgggaggacggagagcgcttttcattcgaggattcggac
cgctttgaggaggattcgctctgttccttcatctccgaggccgagagcctctgccagaac
tggcggggatggcgcaaacagtccgcggggcccaattcccccactggcggcggtggcgga
ggtggcagtggcggtaccagaatgcgagatggactggtgatcccattggtggagctatca
gcaaagcaggtggcatttcatatcccatttgaagtggtggagaaagtttatcccccggtg
cctgagcagctacagctccgaattgctttttggagcttccctgagaatgaagaggatatc
cggctgtattcgtgcctcgccaacggcagtgcagatgagtttcagcgaggggatcagctg
ttccgcatgagggctgtgaaggacccactgcagatagggttccacctgagtgctacagtg
gtgccacctcagatggtcccccccaaaggggcctacaacgtggctgtgatgtttgaccgc
tgtcgggtcacttcctgcagctgcacctgtggggctggggccaaatggtgcactcacgtc
gtggcactctgtctcttccgcatccacaacgcttctgcagtctgcctgcgtgccccagtc
tcagaatccctgtctcggctgcagagggaccagctgcagaagtttgctcagtacctcatc
agtgagctccctcagcagatcctccccacagcccagcgtcttctggatgaactcctctct
tcccagtcaacagccatcaatacggtgtgtggggcccccgaccccacagcagggccctct
gcctctgaccagagtacctggtatttggatgaatcgacactcactgacaacatcaagaag
acactgcacaagttctgtggaccctcgcctgtggtcttcagtgatgtgaactccatgtac
ctgtcttccacggagcctccagctgctgctgaatgggcatgtctgctgcgccctctgagg
ggccgcgagccagagggtgtctggaacctgcttagcattgtgcgggagatgttcaaacgg
agggacagcaatgctgcccccttgttggaaatcctcaccgaccagtgcctcacctatgag
cagataacaggttggtggtacagcgtgcgcacgtccgcctctcacagcagtgccagtggg
cacacgggccgtagcaacgggcagtccgaggtggcagcccacgcgtgtgccagcatgtgt
gacgagatggtcacgctgtggaggctggctgttttggaccctgcactcagcccccagcgc
cgccgggaactgtgtgcgcagctacgccagtggcagctaaaggtgattgagaacgtgaag
cggggacaacacaaaaagaccctggagcggctcttccccggcttccggccggcggtggag
gcctgctacttcaactgggaagaggcctacccacttcccggtgtcacctacagcggcact
gaccggaagctggcgctgtgctgggcccgggccctgccgcctcggcccggcgcctcccga
tccgggggcctggaggaatcccgggagcggccccgagctcttccttctgagcccgctgtg
cggcccaaggagcctggggccaagcgcaagggattgggtgagggggtcccctcgtcgcag
cgggggccccgccgcctctctgctgaggggggagataaggctctgcataagatgggtcca
ggtgggggcaaagccaaggccctgggtggggctggcagtgggggcaagggcccagcaggc
ggtgggagcaagcggcggctgagcagtgaagacagctccctggagccagacctggccgag
atgagcctggatgacagcagcctggccctgggtgcagaggccagcacctttggtggattc
cctgagagcccgccaccctgccctcctcccggtggctcccgaggtccttccaccttcctt
cctgaacccccagatacttacgaagaagatggtggtgtgtacttctcagaagggcccgag
cctcccacagcttctgcgggcccccgtggcctattgcctggggaggtctgtacccgggac
gacctcccttccacagatgagagtggcaatgggctccccaaaaccaaagaggcagccact
gcagtcggagaggaggatgatgactaccaggcatattatctgaatgcccaggatggggct
gggggcgaggaagagaaggccgagggcggggccggggaggagcacgacctgtttgctggg
ctgaagccgctggaacaggagagccgcatggaggtactgttcgcctgtgctgaggccctg
cacgcgcacggctacagcagtgaggcctcccgcctcaccgtggagcttgcccaggacctg
ctagccaacccacccgacctcaaggtagagccgccccctgccaagggcaagaagaacaag
gtatctacgagccgtcagacctgggtggctaccaacaccctgaccaaggcagccttcctg
ttgacagtgctaagtgagcgtccagagcaccacaacctggccttccgagttggcatgttt
gccttggagctacagcggcccccagcttctaccaaggccttggaggtgaagctggcctac
caggagtctgaggtggctgccctgctcaagaagattcctctgggtccgagtgagatgagt
accatgcggtgccgggcagaggagcttcgggaggggacgctctgtgactatcggcctgtt
ttgcctctcatgttggccagtttcatctttgacgttctctgtgctccagtggtttctccc
acgggttcccggcctccgagtcgaaactggaacaacgagatgcctggggacgaggagctg
ggctttgaggcagcggttgccgccttaggtatgaagacaacagtgagtgaggcagagcat
cccctcctgtgtgaaggcacacgtcgggagaagggtgacctggcactagcactaatgatc
acttacaaggatgaccaagccaagctcaaaaagatcttagacaaactgttggaccgagag
agccagacgcataagccccagacactgagttcgttctactcctccagccgcccagccaca
gccagccagaggtctccctcaaagcatgggggcccatctgccccaggggccctgcaaccg
ctgacctcgggctctgcagggcctgctcagccagggagtgtggcaggggctgggccaggc
cccactgagggcttcacagagaagaatgtgcctgaaagttccccacattctccctgtgag
ggtctcccatctgaggcagctttgaccccaaggccagaagggaaggttcccagccgcctg
gcactcggcagtcgtggcggctacaatggacggggctggggctccccagggcggcctaag
aagaaacacacaggcatggccagcattgacagcagtgcccctgaaaccacgtcggatagc
tcccccaccttaagccggaggccacttcgagggggctgggcccctacctcctggggccga
ggacaggacagtgacagcattagcagctcttcctcggactctctgggctcgtcgtcgtcc
agtggaagtcgccgggccagtgccagtggaggggcccgggcgaagaccgttgaagttggc
aggtacaagggccgccgtcccgagagtcatgccccccatgtacccaatcagccatcagag
gcagctgcacacttctacttcgagttggcgaagacggtgctgatcaaggcggggggcaac
agcagcacttccattttcacacatccatcttcctcagggggccaccagggtcctcaccgc
aacctgcatctttgcgccttcgagattgggctttatgcccttggcctgcacaactttgtt
tctcccaactggctctcacgtacttattcttcccacgtttcctggattacaggccaggca
atggagattggcagtgcagctctgactatactggtagaatgctgggatggacacctgaca
ccccctgaggttgcatccctggctgacagggcgtcacgggcacgagactccaatatggtg
agggcagcagcggagctagccctaagctgcctgcctcatgcccatgcgttgaaccccaat
gagatccagcgggccctggtgcagtgcaaggagcaggataacctgatgctggagaaggcc
tgcatggcggtggaagaggcggctaagggtgggggtgtataccccgaagtgttgtttgag
gttgctcaccagtggttctggctctatgagcagacagcaggtggctcatccacagcccgt
gaagcggctacaagctgtagtgccggtgggatcagggcagctggggaggctgggcggggg
ctgcctgagggcagggggggcccagggactgagccggttacagtggcagcggcagcagtg
acagcagcagccacagtggtgccagtcatctcagtggggtccagtttatacccaggtcca
ggactggggcatggtcattcccctggcctgcacccctacactgctctacagccccacctg
ccctgcagccctcagtacctcacccacccagctcaccctgcccacccaatgcctcatatg
ccccggcctgccgtcttccctgtgcccagctctgcatacccacagggtgtgcatcctgcc
ttcttgggggctcagtacccttactcagtgactcccccctcacttgctgccactgctgtg
tctttccccgtcccttccatggcacccatcacagtacatccctaccacacagagccaggg
ctcccactgcccaccagtgtggcctgtgagttgtggggacagggaacagtgagcagtgtc
catccagcatccacgtttccagccatccagggtgcctcgttgccggccctgactacacag
cccagccctctggtgagcggggggtttccaccacccgaggaggagacacacagtcagcct
gtcaacccacacagcctacaccacctgcacgctgcctaccgtgttggaatgctggcactg
gagatgctgggtcgccgagcacacaatgatcaccccaacaacttctcccgctcccccccc
tacactgatgatgtcaaatggttgctggggctggcagcaaagctgggagtgaactacgtg
caccagttctgtgtgggggcagccaagggggtgctgagcccgtttgtgctgcaggagatc
gtcatggagacgctgcagcggctgagccctgctcatgcccacaaccacctgcgtgccccg
gccttccaccaactggtgcagcgctgccagcaggcatacatgcagtacatccaccaccgc
ttgattcacctgacccctgccgactacgacgactttgtgaatgcgatccgcagtgcccgc
agcgccttctgcctgacacccatgggcatgatgcagttcaacgacatcctgcagaacctc
aagcgcagcaaacagaccaaggagctgtggcagcgggtctcactcgagatgaccaccttc
tccccatga
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integrated database retrieval system
