Mirounga leonina (Southern elephant seal): 118021764
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Entry
118021764 CDS
T07472
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118021764 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mlx04121
]
118021764 (SLX4)
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118021764 (SLX4)
Ubiquitin system [BR:
mlx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
118021764 (SLX4)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118021764 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
FokI_D3
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
118021764
NCBI-ProteinID:
XP_034877988
LinkDB
All DBs
Position
Unknown
AA seq
1761 aa
AA seq
DB search
MMDESDDDFKELCASFLQRVKKNVTKEVSGERKTQKASNSTQISKPKRTKPTATKGKTLQ
GPREKKTQSGSQAPRTKKQRAPKWQRSEPTRPENGEGSVLASAVLQEGVQSTQTEAAPDS
NSQPPPPCLTVTAPSPSKPRTAELVLQRMQQFKRADPKRLQRASEGSSLEATLEEKAPEG
PPEEMTAGNGSGPGLPATESDAAVALALQHEFGQQRAPTHEANLEETGLFFCQICQKNLS
AMNVTRREQHVNRCLDEAEKALTPSTPRIPECPICGKPFLSPKSRISHLKQCAVKMDVGP
QLLLQAVRLQTAQPGGACGTLASSFSSHVGGLKRKGATNRKELQKKRKVNEPEAPSEDLL
VAMALSQSEMEREAVPTVLRLESAFPERIRLGAEKKSRKRKAPLCPPPLLVQDPETTRRQ
TEDRVAQLFAEEMELSSTPPLPESRMVKEELEKASQHLKQNFLWEGSALTGAWALEAFYT
TSLVPPMVPQRPAKGLTQEPTLPPVPPDEPELGVRTPPALPSAPPAGHGPGNPSPSASQR
EHQALQDLVDLAGEGLSATPWPCSGGLASSGGAAGMDVSPTGLPPTGFVLPPKEKPPERD
SQASLTLGLLLADFRAMVNNPHLSDVQLQTDSGDVLYAHKFVLYARCPLLMQYVNSEGFF
AVEDGDVRSQRVLLSDVSTEAARALLHYLYAADPGVPPRLAPGLGALAHRFGVSELVLLC
EQAPDVSDSEDRPWKEKEDEDCESRAENFQELLRSMWIDEEEEAEALLKSERYEEDREKV
NEAEMEEIYEFAATQRKLLRGEGAPEIKEETDQFGDNGPASAQILASGQVSQQPENAEQM
EPSGEGREEAPATWKSMRQSTPLPLKGQCADKEKAGSPEEALGRSRSPRPSGGCKAGRKE
GVFLCSADAPEARPFSSTPRKCCGVSQIMSHLREGNGTVSGKRAGSPSPPAHWQTALWRP
CLSQPPGGRSPGRPHPRPHLWGESPSPEPQPQGRASRGAAQDSPAKQRRGRSLLTLLKDP
GLQKGKERGSSLECRNKGVLVSPEKSPSIDLTQSKPGHLSSRSQNTPSSKNREDEIILLL
DSDEELELEQTQIKSIFNGPLEERKVLEVSPKSSELFSVIDVDADQEPFQSPARREASLQ
GGEEGPAGNRGCVGGRGTPRLLCDPESGPEEDSTTDTSWLVPATPLASGSRDSSSQTQIT
GLRSRASVDHMAQVKPWAPLENRGGPETASKFPVITPQMSSSCLVPVRAGSPDGRSPSRP
HPGRPQHCSLAPCPISGGLTDLSGQPQKCSPPGPSLLSQAIASEVVEVEDSEDEQEAASR
RASSSPLLDGDPPIPLDGCHWHVEPLSPIPIDRLNLERTGPLSTSGPGSRAREAPDCRSC
CSPRLPGTAPAPGSRAGHTESQEKAHQAGSPGSSRPSFLNSALWDDWDGEEQKSPELLPP
AQGLSADVAALNSEGLETPKGANRKNLPPKVPITPMPRYSIMETPVLKKELERFGVRPLP
KRQMVLKLKEIFQYTHQTLESDSENESQTSQVLLEAPHSQTHAGRTSKAPRAVGHARLEA
TSGPLPQRSKESTKTKGPRQQKQQPGGSIPPMSMSQANEEPPDPDGDAQLPASQESVASS
GDSSDSSFSSQSSSCEFGAAFESAEDEEGEEELSASQAAVHTAATEEAVRRYIRSRPALY
RKVLLYQPFELAELQAGLKQHGIRVATAKLLDFLDAHCITFTTAAARKEKLHQKRQQPVG
KKRGRATRPVRPSPPLAVSSL
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagtcagatgatgattttaaggaactctgcgccagctttctccaaagggtg
aaaaagaatgtcaccaaggaagtgtcgggggaaaggaagacacaaaaggcctccaacagc
actcagataagcaaaccgaaaaggaccaaaccaactgctaccaaaggcaaaacccttcaa
ggccccagggagaagaaaactcagtctggcagccaggccccgaggactaaaaagcaaagg
gcacccaagtggcagaggagtgaacccactcgccctgagaacggagagggaagtgtgctt
gcctctgctgtgctccaggagggtgtgcagagcacccagacagaggctgctccggacagc
aactcccagccccctcctccctgtctgacagtgacggcaccaagtccctccaaaccccgg
acggcagagttagtcctacaacgaatgcagcagttcaagagagcagaccccaagcgtttg
cagcgtgcttcggaagggagctctctggaggctacacttgaagaaaaggccccagagggc
cctccagaggagatgacagcagggaatgggtctgggcccgggcttcctgccacagagagc
gacgctgcggtggccttggctctgcagcatgagtttgggcagcagcgagcacccacacat
gaggctaacctggaggagacggggttgttcttctgccagatctgtcaaaagaacctctca
gccatgaacgtgacacgaagggagcagcacgtgaaccggtgcttggatgaggctgaaaag
gcactgacaccctccacaccacggatccccgagtgcccaatttgtggcaagccctttctc
agcccaaagagcagaatcagccacctgaaacagtgtgcagtgaagatggatgttggcccc
cagctcctgctccaggctgtgcggctgcagacagctcagcctggcggggcctgtggcacg
ctggcatcgagcttcagcagtcatgttggaggtctgaagcggaagggagccaccaacagg
aaggagctgcagaagaagcggaaggtcaatgagcccgaggcgccgtccgaggacctgctg
gtggccatggctctgtcccagtccgagatggagcgggaggctgtgcccacggtgctcagg
ctagaaagtgctttccctgagaggataagactgggggcagaaaagaagagtcgtaagagg
aaagcacctttatgccctcccccgttgttagtccaggacccggagaccactcggaggcag
acagaggaccgagtggcccagctcttcgcggaggagatggagctgtccagcacgccgcca
cttcctgagagcaggatggtaaaggaagagctggaaaaggccagccagcatctgaagcag
aactttctgtgggagggcagcgccctgactggggcctgggctctggaagccttctacacc
acaagcctggtccctcccatggtgccccagcggcccgccaagggtcttacccaggagccc
acgctgccgccagtgccgcctgacgagccagagctgggtgtgcgaacaccacctgctctc
cccagtgccccgcctgcgggccatggccccgggaacccctcaccctccgccagccagaga
gagcaccaggccctgcaggaccttgtggacctggcgggagaggggctgagtgccaccccg
tggccctgcagtgggggcctggccagctcaggaggggccgcagggatggatgtgtcaccc
actggccttccaccgactgggtttgtcctgccccctaaggaaaagcccccggagagggat
agccaagcttcgctcaccctcggcttgctgctggccgactttagagccatggttaataac
ccacacctgagtgacgtccagctgcagacggacagtggggacgtgctttacgcccacaag
ttcgtgctttatgcccgatgcccccttctcatgcagtatgtgaacagtgagggcttcttc
gccgtggaggatggcgatgtgcggagccagcgtgtgctgctgagtgacgtgagcaccgag
gccgcccgggcgctcctgcattacctgtatgccgcggaccccggcgtgcctccccggctg
gcccccggcctgggcgctctggcccacaggtttggtgttagtgagcttgttcttctgtgt
gaacaagcccctgacgtgagcgattcagaggacagaccgtggaaggagaaggaagacgag
gattgtgaaagccgcgcggagaacttccaagaactcttgaggtccatgtggatagatgaa
gaggaagaagcggaggctttgttgaaatctgagcgctatgaagaagacagagaaaaagtg
aatgaagcagaaatggaagaaatttatgaatttgcagccactcagcgaaagctgctccgg
ggggaaggagctccagagatcaaggaagaaactgaccagttcggggacaacggtcccgca
tctgcgcaaatcttagcgagtggccaggttagccaacagccagaaaatgcagaacagatg
gaaccgtctggtgagggaagagaagaggccccagccacatggaaaagcatgagacagtcc
acgcccctgccactcaagggccagtgtgcggacaaggagaaagcagggtccccagaggaa
gcactgggtcgttccagatcccctcgcccttctgggggctgcaaggcagggagaaaggaa
ggcgtgtttttgtgctcagcagatgctcctgaggcccggccattttcatcaactcccaga
aaatgctgcggagtgtcccagataatgagccatctccgggaaggcaacggcaccgtctcg
ggaaagagggcggggagcccctctccccctgctcactggcagacagccctgtggcgcccg
tgcctgtcacagccccctgggggccggagtcccggccggccacaccctcgtcctcatctt
tggggtgagtcgccctcaccagagccccagccgcagggcagagcttccaggggggccgcc
caggactccccagcaaagcagaggaggggcaggagcctcctcacgttacttaaagatcca
ggcctccagaagggcaaagaacgtggttcctcattggaatgcagaaataaaggggttcta
gtctccccagaaaagtctccatccatcgacctaacccagtcaaaacctggacatttgagc
tccagatctcagaatactccatccagcaagaacagagaagatgagattatccttttattg
gattcagatgaagagctagagctagaacaaacccaaataaaatccattttcaatggtccc
ctggaagaaaggaaagttctagaagttagccccaagtcttctgagctgttttctgttatc
gacgtcgatgcagatcaagaacctttccaaagcccagcaagaagagaggcttccctgcag
ggcggggaggaggggccggcagggaaccggggctgtgtggggggcagagggacccctcgg
ctgttgtgtgaccccgagagcggccccgaggaggacagcaccacggatacctcatggctc
gtgcctgccacgccactggccagcggaagccgggactcttcctcacagacacagataaca
ggcctcaggtccagggcttcggtggatcacatggctcaggtcaagccctgggccccgtta
gaaaacaggggtggccccgaaaccgcaagtaagtttccagtcatcacaccccagatgtcg
tcgtcatgcctggtccccgtccgtgcaggcagccctgacggcaggagcccttccaggccc
caccccgggcgcccccagcactgctctctggctccctgtcccatctctggcggcctcacc
gatctcagcgggcagccccagaagtgctcaccccccgggccgagcctgctgagccaggcc
atcgccagtgaggtggtggaggtggaagacagcgaagatgagcaggaggcggcctcccgt
cgggcgagcagcagccccctgctggacggcgaccctccgatccccctggacggttgccac
tggcacgtggagcccctctcaccgattcccattgaccgcctgaacctcgagcggaccggc
cccctgagcaccagcggtccgggcagtagggccagggaggccccagactgccgcagctgc
tgctccccccgcctcccgggcaccgcccccgccccaggaagccgcgccggccacacagag
tctcaagagaaggcccatcaggccggctcgcctgggagcagcaggccaagctttttgaac
tccgctctgtgggacgattgggatggagaggagcagaagtcaccagagctccttcctccg
gcccaggggctgagtgctgatgtcgccgctctgaactcagaagggctggagacgccaaaa
ggtgctaatcggaagaacttgcccccgaaagtgcccataacacccatgccaaggtattcc
atcatggagactccagtactgaagaaagaactggagaggtttggcgtccgccctctaccc
aaacgccagatggtcctaaaactgaaggagatattccagtacactcaccagactctggag
tccgactcggagaatgagagccagacctcacaggtgctcctggaggctcctcacagccag
acccacgccggcaggacctccaaggctcccagggccgttggccatgcccggctggaggcc
acttctggccctcttcctcaaaggtccaaggagtccactaagaccaagggtccccgacag
caaaagcaacagcctggtggaagcatccctccaatgagcatgtcacaggccaacgaggag
cctccagaccctgatggggatgcccagctcccagcatcgcaggaatcggtggcctcctct
ggggacagcagtgacagctcctttagctcacaaagttcttcctgtgagtttggagcggcc
tttgagtctgcagaggatgaggagggtgaagaggagctaagcgcgtcccaggcggcagtg
cacacggcagccacggaggaggccgtgaggcgctacatccgctccaggccggccctctac
cgcaaggtcctgctgtaccagcccttcgagctggcagagctgcaggccgggctgaagcag
cacggcatccgcgtggccacggcgaagctgctggacttcctggatgcccactgcatcacc
ttcaccaccgccgcggcccggaaggagaagctccaccagaagagacagcagcctgtgggc
aagaagcggggccgagccaccaggcctgtccgcccctccccacccctggccgtcagcagc
ctgtga
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integrated database retrieval system
