KEGG   Mirounga leonina (Southern elephant seal): 118021799
Entry
118021799         CDS       T07472                                 
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
  KO
K05700  vinculin
Organism
mlx  Mirounga leonina (Southern elephant seal)
Pathway
mlx04510  Focal adhesion
mlx04517  IgSF CAM signaling
mlx04518  Integrin signaling
mlx04519  Cadherin signaling
mlx04520  Adherens junction
mlx04670  Leukocyte transendothelial migration
mlx04810  Regulation of actin cytoskeleton
mlx04820  Cytoskeleton in muscle cells
mlx05100  Bacterial invasion of epithelial cells
mlx05146  Amoebiasis
Brite
KEGG Orthology (KO) [BR:mlx00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118021799 (VCL)
   04518 Integrin signaling
    118021799 (VCL)
   04519 Cadherin signaling
    118021799 (VCL)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118021799 (VCL)
   04520 Adherens junction
    118021799 (VCL)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118021799 (VCL)
   04810 Regulation of actin cytoskeleton
    118021799 (VCL)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    118021799 (VCL)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    118021799 (VCL)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    118021799 (VCL)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mlx04812]
    118021799 (VCL)
   04147 Exosome [BR:mlx04147]
    118021799 (VCL)
Cytoskeleton proteins [BR:mlx04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     118021799 (VCL)
Exosome [BR:mlx04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118021799 (VCL)
SSDB
Motif
Pfam: Vinculin Talin_IBS2B VMAP-M0 WHD_2nd_SelB_bact
Other DBs
NCBI-GeneID: 118021799
NCBI-ProteinID: XP_034878095
LinkDB
Position
Unknown
AA seq 1066 aa
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQVRGALAEARKIAE
LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPSREEVFDERAANFEHHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLADELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgccggtgtttcatacgcgcacgatcgagagcatcttggagccggtggcgcagcagatc
tcgcacctggtaatcatgcacgaggaaggcgaggtggacggcaaagccatccctgacctc
accgcgcccgtggccgccgtgcaggcggccgtcagcaaccttgtccgggttggaaaagag
actgttcaaaccactgaggatcagattttgaagagagatatgccaccagcatttattaag
gttgagaatgcttgcaccaagcttgtccaggcagcccagatgcttcagtcagacccttac
tcagtgcctgctcgagattatctaatcgatgggtcaaggggcatcctctctggcacatca
gacctgctcctcaccttcgatgaggctgaggttcgtaaaattattagagtttgcaaagga
attttggaatatcttacagtggcagaggtggtggaaactatggaagatttggtcacctac
acaaagaatcttggaccaggaatgacaaagatggccaagatgattgatgaaaggcagcag
gaactgactcaccaggagcaccgagtgatgttggtgaactccatgaacaccgtgaaagaa
ttgctgccagttctcatttcagctatgaagatttttgtaacaactaaaaattcaaaaaac
caaggaatagaagaagctttgaaaaaccgcaattttactgtagagaagatgagtgctgaa
attaatgagatcattcgtgtattacaactcacttcttgggatgaagatgcctgggccagc
aaggacactgaagccatgaagagagcattggcctcgatagactccaaactgaaccaggcc
aaaggttggctccgtgatcccagtgcctccccaggggatgccggtgagcaggccatcaga
cagatcttagatgaagctggaaaagttggtgagctctgtgcaggcaaagaacgcagggag
atcctgggaacctgtaaaatgctggggcagatgactgatcaagtggctgacctccgagcc
agaggacaaggggcctcaccggtggccatgcagaaagcccagcaggtgtcgcagggtctg
gacgtgctcacagcaaaagtggaaaatgcagcccgcaagctggaagctatgaccaactcc
aagcagagcattgccaagaagattgatgctgctcagaattggcttgcagatccaaatggt
ggaccagaaggagaagaacaggtccgaggggctttggctgaagcccggaaaatagcagaa
ttatgtgatgatcctaaagagagagatgacattctacgttctcttggggaaatatctgct
ctgacttctaaattggcagatctccggagacagggcaaaggagattccccagaggcccga
gcattggccaaacaggtggccacagctctgcagaacttgcagaccaaaaccaatagagct
gtggccaacagcaggcccgccaaggcagctgtccacctggagggcaagattgagcaagca
cagcggtggattgataatcccacagtggatgatcggggagttggtcaggctgccatccgg
gggcttgtggccgaagggcatcgtctggctaatgtcatgatggggccgtatcgccaagat
cttcttgcaaagtgtgaccgcgtggaccagctgacggcccagctggctgacctggctgcc
agaggggaaggagagagtcctcaggcgagagcccttgcctctcagctccaagactcctta
aaggatctgaaagcccggatgcaggaggcgatgactcaggaggtgtcagatgttttcagc
gataccacaactcccatcaagctgttggcggtggcggccactgcgcctcctgatgctccc
agtagggaggaagtatttgatgagagggcagctaactttgagcaccattcgggaaggctc
ggtgccacggcggagaaggcagctgctgttggaactgctaataaatccacggtagaaggc
attcaggcatcagtaaagacggcccgagaactcacaccccaggtcgtctcggctgctcgc
atcttacttaggaatcctggaaatcaagctgcttatgaacattttgagaccatgaagaac
cagtggatcgataatgtcgaaaaaatgacagggctggtggacgaagctattgataccaaa
tctctgctggatgcttctgaagaagcaattaaaaaagacctggacaagtgtaaagtagcc
atggccaacatccagccgcagatgttggtcgccggggcaaccagcatcgcccgccgggcc
aaccgtatcctgctggtggccaagagggaggtggagaactcagaggatcccaagttccgt
gaggctgtgaaggccgcctctgacgaattgagcaaaaccatctcccccatggtgatggat
gccaaggctgtggctggaaacatttctgaccctggcctgcaaaagagcttcctggactca
ggatatcggatcctgggagctgtggccaaggtcagagaagccttccaacctcaggagcct
gacttcccgcctcctcctccggatcttgagcagctccgtctggcagatgagcttgctcct
cccaaaccacctctgcctgagggtgaggtccctccgcccaggcccccacctccagaggag
aaggatgaagagttccctgagcagaaagccggggaggtgattaaccagccaatgatgatg
gctgccaggcagctccatgatgaagctcgcaaatggtccagcaagggcaatgacatcatc
gcggcggccaagcgcatggctctgctgatggcggagatgtctcggctggtaagagggggc
agtggtaccaagcgggcactgattcagtgtgccaaggacattgccaaggcctcagatgag
gtgacgcggctggccaaggaggttgccaagcagtgcacagataagcggattagaaccaac
ctcttacaggtgtgtgagcgaatcccaaccataagcacccagctcaagatcctgtccacg
gtgaaggccaccatgctgggccggaccaacatcagtgacgaggagtccgagcaggccaca
gagatgctggttcacaatgcccagaacctcatgcagtctgtgaaggagactgttcgagaa
gcagaagctgcttcaatcaaaattcgaacagatgctggatttacactgcgctgggttaga
aagactccctggtaccagtag

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