Mirounga leonina (Southern elephant seal): 118021826
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Entry
118021826 CDS
T07472
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04612
Antigen processing and presentation
mlx05145
Toxoplasmosis
mlx05152
Tuberculosis
mlx05164
Influenza A
mlx05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
118021826 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118021826 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
118021826 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
118021826 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
118021826 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mlx01001
]
118021826 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mlx04054
]
118021826 (CIITA)
Enzymes [BR:
mlx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118021826 (CIITA)
Protein kinases [BR:
mlx01001
]
Serine/threonine kinases: Other
TAF1 family
118021826 (CIITA)
Pattern recognition receptors [BR:
mlx04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118021826 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_14
LRR_8
AAA_16
LRR_9
Motif
Other DBs
NCBI-GeneID:
118021826
NCBI-ProteinID:
XP_034878158
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MLLSSHRPSQVQALLDHMLEKELLSREYHFALLREPDGEALARKISLTLLEKGDPDLALL
RWAWSGLQVPVAERDPDPKDHGGSGQCAAMELGSLEGGYLELLNSSADPLQLYHLYDQTD
LAREEIELCSEPDMDTINCEQFSKLLCDMEGDEETREAYANIAELDQYVFQDSQLDGLGK
DIFIEHIGLEEMISESVEVLEEAGQKSQKRPFPEELPVDVKHRKLAEPLAVPMVTGTFVV
GSVSDSAALPCLSPPAVFNKEPASSQTWLEETILMPVPPSSSLLSCPSLPAGRIQIIPAL
PSLPQGLWQISGAGTGVSGMVIYQGEMPQASQVLPSSGPAVQSLPKFPDRPGSTSPFAPS
AADLPGMPEPALTSRANTTEDQMSPTQSRAAHEVSSKPLKWPESVEQFCSSLRDKYQAEL
AGPEGILVEVELVKARLERSSGKNQERELATPDWAERQLARGGLAEVLGAAGDCRRPRET
QVIAVLGKAGQGKSRWAREVSRAWACGQLPQYDFVFYFPCHCLDHAKGDTYRLQDLLFCL
GPQPRPVDEEVFRYILRRPDRVLLILDAFEGLEAQDGLLHSAGGPVSTEPHSLRGLLAGL
FQRKLLRGCTLLLTARPWGRLAQSLSKANVLFEVAGFSAEQAKTYMTHYLERAGATACQE
RALALLQGQPFLLSLSHSPTVCRAVCRLSEALLQLGDKAELPSTLTGLYVGLLGPAARDS
PPEALAGLARLAWELGRRHRGTLQDSQFPSAAVRAWAVAKGLVQPIPGAPDVELAFSSFL
LQCFLGAVWLALSTEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLLFQPHADCLGA
LAGPAAAAVGARKQKVLSRYLKGLQPGTLRAGRLLELLHCAHEATDAAIWQHVVQGLPAR
LSFLGTRLTPPNTYVLCSALVAAGQDFSLDLRSTGIDPAGLGSLVGLSCVTHFRASLSDM
VGLWESLQQRGETKLLRAVEEKFTIEPFKAKSPKDVEDLGNLVQIQRTRNSSEDTAGELP
AVRDLKKLEFALGSVLGPQAFPKLVRILEAFSSLQHLDLDSLSENKIGDEGVEQLSATFP
RLRALETLNLSQNSITDVGACKLAEALPSLAASLLRLSLYNNSICDMGAESLAHVLPDMV
SLRVLDVQYNKFTAAGAQQLAASLRKCPHVETLAMWMPTIPFGVHEHLQQLDSRISLR
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtccagccatcggccgagtcaggtgcaggccctcctggaccacatgctggag
aaggagcttctgtcccgggagtaccacttcgccctgctccgcgagcctgatggcgaggcc
ctggccaggaagatctccttgaccctgctggagaaaggagacccagacttggccctcttg
aggtgggcatggagtgggttgcaggtcccagtggccgagagggatcccgaccccaaggac
catggtggcagcggacagtgtgccgccatggagttggggtctctagaaggcgggtacctg
gagcttctcaacagcagtgccgatcccttgcagctctaccacctctatgaccagacggac
ctggctagagaagagattgagctctgctcagaacccgacatggacaccatcaactgcgaa
cagttcagcaaactgttgtgtgacatggaaggtgatgaagagaccagggaggcttatgcc
aatatcgcggaactggaccagtacgtgtttcaggactcccaactggatggtctgggcaaa
gacattttcattgagcatataggattggaagaaatgatcagcgagagtgtcgaggtgctg
gaggaagcagggcagaaaagtcagaaaagacccttcccagaggagctgcccgtggacgtg
aagcacaggaagctggctgagcccctcgctgtgcccatggtgactggcacgttcgtggtc
gggtcagtgagtgactctgcagctctgccctgcctgtcaccacctgctgtgttcaacaag
gagccagcatccagccagacctggctggaggagaccatcctgatgcctgtgcccccttcc
agttccttgctgagctgcccgagtcttcctgctggacgcatccagatcatccctgccctc
ccctctctgccccaggggctctggcaaatctcaggggctgggacgggggtgtctggtatg
gtcatttatcaaggcgagatgccccaggccagccaagtgcttccttccagtggcccagct
gtgcagagcctccccaagttcccagatcggcccggctccaccagcccctttgccccgtct
gcagctgaccttcctggaatgccagaaccagccttgacctcccgtgcaaatacgacagag
gaccagatgtcccctacccaaagccgggcagctcacgaggtctccagcaagcctctgaaa
tggcctgagagtgtggagcagttctgcagctccctacgggacaagtaccaggctgagctc
gccggcccggaaggcatcctggtggaggtggagctggtgaaagcacggctggagaggagc
agtggcaaaaaccaggagagggagctggccaccccggactgggcagagaggcagttggcc
cgcgggggtctggccgaggtgctgggggctgccggggactgccggcggccgcgggagacg
caggtgatcgccgtgctgggcaaagcaggacaggggaagagccgttgggcccgggaagtg
agccgggcctgggcctgcggccagttgccccagtatgacttcgtcttctacttcccctgc
cactgtttggaccacgccaaaggggacacttaccgcctgcaggatctgctcttctgcctg
ggcccccagccacggcctgtggacgaggaggtcttcagatacatcttgaggcggcccgac
cgggttctgctcatcctggacgccttcgaggggcttgaagcccaagacggcctcctgcac
agcgcgggcggacccgtgtccacagagccccactccctccgcgggctgctggccggactc
ttccagcggaagctgcttcgaggctgcaccctgctgctcacggcccggccctggggccgc
ctggcccagagcctgagcaaggccaacgtcctgttcgaggtggccggcttctcagccgag
caggccaagacctacatgacgcactacttggagcgcgctggggcgactgcatgccaggag
cgagccctggccctcctccagggccagccgttcctgctcagcctcagccacagccccacc
gtgtgccgggccgtgtgccggctctccgaggccctcctacagctgggtgacaaggctgag
ctgccctccacgctcacaggactctacgtgggcctgctgggccccgcagcccgcgacagc
cccccggaggccctggcaggactggccaggctggcctgggagctgggccgcagacaccgg
ggcaccctgcaggacagccagttcccatcggccgccgtgagggcctgggccgtggccaaa
ggcctggtgcagcccatcccgggcgccccggacgtggagctggccttctccagcttcctc
ctgcagtgcttcctgggggccgtgtggctggccctgagcactgaaatcaaggacaaggag
ctgccgcagtacttggcgttgaccccgaggaagaagaggccctatgacaactggctggag
ggtgtgccgcgcttcctggctggcctgcttttccagcctcacgccgactgcctcggagcc
ctggcagggccagctgcggccgccgtgggggccaggaagcagaaggtgctcagcaggtac
ctgaagggcctgcagccagggacgctccgggccgggcggctgctggaactgctgcactgt
gcgcatgaggccacggacgccgcgatctggcagcacgtggtgcaggggcttccagcccgc
ctctccttcctgggcacccggctcacaccccccaacacctacgtgctgtgcagtgccttg
gtggcggccggccaagacttctccctggacctccgcagcactggcattgaccccgctggg
ctggggagcctcgtgggactcagctgcgtcacccatttcagggcttcgctgagtgacatg
gtggggctgtgggagtctctacagcagcgtggggagaccaagctgctccgggcagtggag
gagaagttcaccatcgagcctttcaaggccaagtccccgaaggatgtggaagacctcggc
aacctcgtgcagatccagaggacaaggaattcctcggaagacacagctggagagctccct
gctgtccgggatctaaagaagctggagtttgcgctgggctctgtcttaggcccccaggct
tttcccaaactggtgaggatcctcgaggccttttcctcacttcagcatctggacctggac
tcgctgagtgagaacaagatcggggatgagggtgtcgagcagttgtcagccaccttccct
cggctgagggccctggagactctcaacttgtcccagaacagcatcaccgacgtgggcgcc
tgcaagctcgccgaggccctgccctccctggctgcgtccctcctcagactgagcctgtac
aataacagcatctgtgacatgggagctgagagcctggcacacgtgcttccagacatggtg
tccctccgggtgttggacgtccagtataacaagttcacggctgctggggcccagcagcta
gctgccagcctgagaaagtgccctcatgtggagacactggcgatgtggatgcccaccatc
ccgtttggtgtccatgaacacctgcagcagctagactcacggatcagcctgagatga
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