Mirounga leonina (Southern elephant seal): 118022325
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Entry
118022325 CDS
T07472
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03015
mRNA surveillance pathway
mlx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118022325 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
118022325 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118022325 (PABPC4L)
03041 Spliceosome [BR:
mlx03041
]
118022325 (PABPC4L)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118022325 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
118022325 (PABPC4L)
Spliceosome [BR:
mlx03041
]
Complex C
Other components
Complex C specific factors
118022325 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_Nup35
RBD_DEAH11
RRM_MARF1
RRM_10
RBD_RDR6
Nup35_RRM_2
DUF4523
RRM_3
Motif
Other DBs
NCBI-GeneID:
118022325
NCBI-ProteinID:
XP_034878955
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MNVAAKYRQASLYVGDLNADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLK
LADAQKALDTMNFDMIKGRPIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSA
FGKILSSKVMSDDQGSRGYAFVHFQNQVAADRAIEEMNGALLKDCRLFVGRFKNRKDREA
ELQNKVNEFTNVYIKNFGDDMDDERLKEAFGKYGKTLSVKVMTDSRGKSKGFGFVSFDSH
EAAKRAVEEMNGKDINGQLLFVGRAQKKSERQAELKQMFEQLKQERFRRCQGMKLYIKNL
DDTIDDEKLWREFSSFGSISRVKIMREEGRSKGFGLICFSSPEEATKAMAEMNGRILGSK
PLYVALAQRP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagcagccaagtaccgccaggcatccctgtacgtgggtgatctcaatgcagat
gtcacggaggacctgctgttcaaaaagttcagcaccgtggggcccgtgctgtccatccgc
atctgcagggacctggtcacccgccgctccctgggctatgcctacgtgaactttctgaag
ctggctgatgcccagaaggccctggacacaatgaactttgacatgataaaaggcagaccc
atccgtctcatgtggtcccaacgtgatgcctacttaaggaaatctggcattgggaacgtg
ttcatcaagaatctggacaaatctattgataacaaaaccctttatgaacatttttcagct
tttgggaagatcctgtcctccaaggtgatgagtgacgatcaaggctctaggggctatgca
tttgtgcacttccagaaccaggtcgcggccgacagggccatcgaggagatgaatggggcc
ctgcttaaggactgcaggctgtttgttggcagattcaagaaccggaaagatcgggaagcc
gagctccaaaacaaggtcaatgaattcaccaatgtttacatcaaaaactttggagatgac
atggatgatgagagactgaaggaagcttttggtaaatatggcaaaaccctgagtgttaag
gtgatgacagattccagagggaaatccaaaggctttggctttgtgagttttgatagccat
gaggctgccaaaagggctgttgaagaaatgaatgggaaggacataaacggacagctgctt
tttgtaggccgggcgcaaaagaaatcagagcggcaggcggagttaaagcaaatgtttgag
cagctgaaacaggaaagatttcggagatgccagggcatgaagctctatattaagaacctc
gatgataccattgatgatgaaaaactgtggagggaattttcttcgttcgggtcaattagc
agagtcaagataatgcgggaagaagggcgaagcaaagggtttggcttgatctgcttctcc
tctcctgaggaggccactaaagcaatggctgagatgaatggccgaatcttgggctccaag
ccactctacgtcgccctggcccagaggccctag
DBGET
integrated database retrieval system
