Mirounga leonina (Southern elephant seal): 118022737
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Entry
118022737 CDS
T07472
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mlx03036
]
118022737 (TDRD12)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
118022737 (TDRD12)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118022737 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118022737
NCBI-ProteinID:
XP_034879404
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MLEVLVLKIEDPGCFWVMIKGCSPFLDHEVDYQKLNSAMNDFYNSMCQDTEIKPLMLEEG
QVCVVYCQELKCWCRAVIKSIVSSADHYLAECFLVDFAKYIPVKSKNIRVAVETFMQLPY
RAKKFRLYCTKPVTLHIDFCEDSAEIVPAKKWDSAAIQYFQNILKATTQVEAKLCAVEED
TFEVYLYATIRNEKVCVNDDLVAKNFARYISPKENKNVDSVEKSRLSIKSASFSSKLNPA
LTLWPMFLQGKDPQGMENSRGLTFLAQSLQHPGPKGGVGDLGPAAVYLDKTIKCNLDSLR
SSPKKKSEKKQQCISLKDVNKCVESSMYWPTKRGITIYAEPDTPAASALCQRPNEKPLRL
AEKKEHNEKNGCVKLLQFLNPDPLRTDGISDLQQLQRLRSGSQQPLAVLRHKIEPCLSVD
ASPLSADVRKALQRNKFPGPSHTESYSWPPIARGCDVVVISHCGNDPLLYLPPVLTILQT
GGCYKSLPSRNGPLAVIVCPGWKKAQFTFELLEDYSTSSRPLHPILLTIGLHKDEAKNMK
LPRGCDIIVTTPHSLLRLLKYQSLLFLRLCHLILDEVEVLFFEATEEMFAILDNFKKNID
VEERESAPHQMVAVGVHWSRHIEQLVKEFMNDPYIVVTAMEEAALYGSVQQVVHLCLECE
KTSTLLQILDFIPSQAQKTLIFTGSVAETEIVCKVVESSSIFCLKMHKEMVFNLKSVLEQ
WKKKLSSGSHIVLALTDDCIPLLTITDATCVIHFSFPSSPKIFGGRLYCMSGRFQSSTEQ
GSPAEQGDKKTKSVLLLTERNACHAVGVLRYLERADAKIPSELYEFTAGVLEAKEDKKAR
RPLCPYLKAFGFCKDKRICPDRHHVNPEIDMPRKLSNQTLPTFGYIKIIPFYISNATHYF
GRIIDKQVDLYATLNAEMNEYFKGNSNKTTVEKVEKLGLYGLAEKTLYHRVEVLELSQKE
DTWGPDSVLVKFIDEGRTGLVPRDQLLHLPENFHALPPQAVEFIVCRVKPADNEVEWNPK
VTRYIHRKIIGKLHDAKVILALGNTVWIDPMVHITKLSNLKTSVIDYNVRTEILSMGMGI
DNSEHIEQLKTLHERAKMPPDEESLSQALAPSPAEAAARPQSPQQEDRGSERGADSGAKP
ENQKHETSPENTSDSPLHRTTEPLKSFHPQIKWFQKDDVVILKIRIRNVKDYKCKYFQDR
VVFSGWAGEKFYLADMELRASIVKDACKCAITNGEPVITLAKETRGSWCSLLKQRNPNVA
FDFDHWEECEEDSQFPQVVNSKNLPCKVAEGAEDSDRTSEDDGSESE
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtgctggtgctgaagattgaagatccaggatgcttctgggttatgataaaa
ggatgtagtccgtttttagatcatgaagttgattaccaaaaactaaatagtgccatgaat
gacttctataatagcatgtgtcaagatacagaaataaaaccgttaatgttggaagaaggg
caggtctgtgtggtgtattgtcaggaactgaagtgctggtgcagggctgttattaagtcc
attgtgtcttcggcagaccattacctggcagaatgtttccttgtggattttgccaagtac
atcccagtgaaatctaaaaacatccgagttgcagtagaaacttttatgcagcttccctac
cgggcgaaaaaattcaggctgtattgcacgaagcctgttacattacacattgacttctgt
gaagacagcgctgagattgtgcctgccaagaagtgggacagcgcagctattcagtacttc
cagaacatcctaaaagcaaccacccaggtggaagccaaattgtgtgccgtggaagaagat
acttttgaggtctacctttatgcaactataagaaatgaaaaagtctgtgttaatgatgat
ctggttgcgaagaacttcgctcgttacatatcacccaaggagaataaaaacgttgattct
gtagagaaatcaagattgagtataaagtcagcatccttttccagtaaactcaatccagcg
cttactctttggccaatgtttttgcaaggaaaagatccgcaaggaatggaaaattcacgt
ggtttaacttttctggctcagtccctccagcatccggggcccaagggtggtgttggtgac
cttgggccagctgctgtgtatctggataaaactataaaatgtaatctggattcattgaga
agttcacctaaaaaaaagtctgaaaagaaacaacagtgcatctctttgaaagatgtaaat
aagtgtgttgaatcctccatgtactggccaacaaagagggggataaccatatatgctgag
ccagatacaccagcagcaagcgctttatgtcagagaccaaatgagaaaccacttaggttg
gccgagaagaaagaacacaatgagaagaatggctgtgtgaaattgttgcagtttttaaat
cctgatcctttgagaactgatgggatctctgatctacagcagttgcagaggctgcggtcc
ggctcccagcagcccttggccgtgctcaggcacaagatcgagccttgtttgtccgttgat
gcgtcgccgctttcggcagacgtgagaaaggctcttcaaagaaacaagttcccaggacct
agccacacggaatcctactcttggcctcccatagcccggggctgtgacgtggtggtcatc
tctcactgtggaaatgatcctctgctgtacctcccaccagtccttacaattctgcaaacg
gggggctgctacaagtctttaccaagtagaaatggacctctggcagtcatcgtgtgccct
gggtggaaaaaggcccaatttacttttgaattactggaagactatagcacatcctccagg
cctcttcatcccatattgttaacaatcggactccacaaagatgaagccaaaaacatgaag
cttccaagggggtgtgacatcattgttacaacaccccacagcctcctgagacttctcaaa
taccaaagcttgttatttcttagactctgtcacctcatcttggatgaggtggaagtgtta
ttctttgaagctactgaagaaatgtttgctatattagataactttaaaaaaaatattgac
gttgaagaaagggaatctgcaccacatcagatggttgctgtcggcgttcattggagcaga
catatagagcagttggtcaaagagttcatgaacgacccctacatcgtggtcacagccatg
gaagaggctgctctctatggcagcgtccagcaggtagtacacctttgcctagaatgtgaa
aaaacctctactttactccagattttagatttcattccaagtcaagcacaaaagaccttg
atcttcaccggttctgtagctgaaacagaaatagtgtgtaaggtagtagaaagcagttca
atattttgcttgaaaatgcataaagaaatggtttttaatttaaaaagtgttttagaacag
tggaagaagaagttaagttctggctctcacattgtattagccttaacggatgattgcata
ccactcctgaccatcactgatgccacgtgtgtgatccacttcagctttccttcctccccc
aaaatctttggtggacgcctgtactgcatgtctggtcgttttcagagttccaccgagcag
ggttctcctgcggaacagggagataagaagaccaaatccgtgttgctgctgacagagagg
aatgcgtgccacgcggtcggcgtcctgcgctacctggagcgggcagatgccaagattccc
tcggagctgtatgagtttactgccggggttctggaagccaaagaagataaaaaagccaga
aggcctctttgtccgtatcttaaggcttttggtttttgcaaagacaaaaggatctgtcct
gatagacaccatgttaatccagaaatagatatgccaaggaaattatccaatcaaactcta
ccaacatttggatacatcaaaataatacccttttatatttcgaatgcaacgcattatttt
ggtcgtataattgataaacaagtggatctttatgcaactcttaatgctgaaatgaatgag
tattttaagggtaacagcaataaaacgactgttgaaaaggtggagaaactcggattatat
ggattagcagaaaaaacactttatcacagggttgaggtgctggagctgagccaaaaagaa
gacacctggggtccagacagtgtccttgtgaagtttatagatgaaggccggactggactc
gtcccgagagaccagctgctgcatcttccggaaaatttccacgctctgcccccccaggcg
gtggagttcattgtttgcagagtgaaacccgctgacaatgaagttgagtggaatccaaag
gttactaggtacattcatcgtaaaattattggaaaattgcatgatgccaaagtgatattg
gctttaggaaatacagtgtggatcgatccaatggtgcacattacaaaactttcaaatttg
aagacctctgttattgactataatgttcgtactgaaattttgtcgatgggaatgggcatt
gacaactcggagcatatagaacagctgaagacgttacacgaaagagctaaaatgccacct
gatgaagaaagcctgagccaggccctggcgccttctccagcagaagctgctgctcgtccg
cagagcccacagcaggaggacagaggctcggaaagaggtgccgactccggggcaaagccg
gaaaaccaaaagcatgaaacttcacctgaaaacacaagtgattctccccttcacagaacc
acagagcctctgaaaagcttccacccacagataaaatggttccaaaaagatgatgtggtc
atactgaagataagaataaggaacgtaaaagattacaaatgtaaatatttccaagataga
gtcgttttcagtggctgggcgggagagaagttttacttggctgacatggagctgcgggcc
agcatagtaaaggacgcctgcaagtgcgcgatcacaaacggggagcctgtgatcactctt
gccaaagagaccaggggatcttggtgcagcttactcaaacagaggaatcctaatgtggct
tttgatttcgatcactgggaagaatgtgaagaggacagccagttcccccaggttgtgaat
tctaaaaacctgccgtgcaaagtggcagagggggctgaggacagtgaccggacatcggag
gatgacggaagtgagagtgaatga
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