Mirounga leonina (Southern elephant seal): 118023077
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Entry
118023077 CDS
T07472
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03440
Homologous recombination
mlx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118023077 (BLM)
03460 Fanconi anemia pathway
118023077 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlx03032
]
118023077 (BLM)
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118023077 (BLM)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118023077 (BLM)
DNA replication proteins [BR:
mlx03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
118023077 (BLM)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
118023077 (BLM)
Bloom's syndrome complex (BTR)
118023077 (BLM)
FA (Fanconi anemia) pathway
118023077 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
BDHCT_assoc
DEAD
BDHCT
Helicase_C
RecQ_Zn_bind
RQC
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
118023077
NCBI-ProteinID:
XP_034880072
LinkDB
All DBs
Position
Unknown
AA seq
1432 aa
AA seq
DB search
MAAVPQNNLQEQLQRHSAIKLNNKLSPSKPRSLGFTFKKKITTASNVSVTSVSVAKTPVF
SDKDVNVTEAFSFPGPPPLTSQQTRPSDFKSAPAGQQTRRAVSEPLLPDVLQVSQGVLCN
TPNTPVVKKSSNATFKKLEFSSSSDSFITINDWDDMDDFDISGNPKAFATPCKNHFVRVS
TAQKSKKSKRNFLKVQLPEANTGKADLTPSSSDSRQACLTKKQNDDSEWFSNDVICIDDD
PSPEELIRGDAQESHPLKTHLGEERDGSEKKNLEETELHSVEKSPCVELDEDDYDTDFVP
PSPEEEVISASSSSLQCFSMLKDLDTSGTKDSPGTSKALLTPEGVTTQQPAQETSPDSDG
ARVRQTSLQQQLIHVMDQICKLVDTIPDDELKALDCGNELHQQRDIRRKLLAEADLNTRD
ASILASGWRCRPDSPGSPPEGMASVSALDAFPKGNSCPTGNSVKELNFPHLPSHSSSTRE
CLLATTPGKTGFSATTKNPLERPLFSPHLQKSFVSSNWAETPRIEKRNESSYFPGNVLTS
TAVKDQNKRAAPVNDLEREIQAACDIDTFDIDGFDDDDDDDDWEDIMHNLAASKSSTAAC
QPIKEGRPVKPVSERISSAKTNCLPVASTAQNKNSESIQNYTDKSAQNLASRNLKHERFQ
SLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACV
SPGVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYVQLSKKDPIIKLLYV
TPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVP
VMALTATANPRVQKDILTQLKILQPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKH
HPSDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICA
TIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLRRLI
LMEKDGNHHTRETHLNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKYPDVSCDN
CCKTKDYKTRDVTDDVENIVRFVQEHSSSQGTRNKNHIGPSGRFTMNMLVDIFLGSKSAK
IQSGIFGKGSTYSRHNAERLFKKLILDKILDEDLYINANDQPIAYVMLGNKAQTVLNGHL
KVDFMETENSTSVKKQKALVAKISQREEVVKKCLGELTEVCKSLGKVFGVHYFNIFNTVT
LKKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVIPVLQKYSEWTLPAEDGSPRGSPGSRR
GTRRRAAEEFDEETPVSSHYFAKKTKSERKRKRMSASQRPKRRKTSFGSSKTEGGSTVCR
KTSSKSKSSNIFGPHSSVHGSQAASGATRKLGIMAPPKPINRPFLKPSYAFS
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgttccccagaataatctacaggagcaactacagcgccattcagccatcaaa
cttaataacaaattaagtccttctaaaccgagatctttaggttttacttttaaaaagaaa
ataacgacggccagcaatgtatctgtcactagtgtgtcagtagcgaaaacacctgtgttc
agtgataaagatgttaatgtcactgaggccttttccttccctggacctccgcccctcaca
agtcagcagacaaggcccagcgacttcaaaagtgctccagcaggacagcaaaccaggaga
gctgtttcagaaccattattgccagatgtgttgcaggtttcacagggagtcttgtgtaat
acgccgaacacaccagttgtaaagaaatccagtaatgctactttcaagaaattagaattt
agttcttcatcagattcttttattaccatcaatgattgggatgatatggatgactttgat
atttctggaaatccaaaagcatttgctacgccctgcaaaaatcactttgtgagagtaagc
actgctcagaaatcaaaaaagtctaagagaaactttttgaaagtacagcttcccgaagca
aatacaggaaaggctgatttgactccatcctcctctgacagcaggcaagcatgtttgact
aagaaacagaatgacgactcggaatggttcagtaacgatgtgatttgcattgacgatgac
cccagtcctgaagagcttatacgtggagatgctcaggagagtcatcctttaaaaactcat
ttaggagaagaaagagatggtagtgaaaagaagaacttggaagaaacggaattgcattca
gttgagaagtctccatgtgttgagcttgacgaagatgattacgatacagactttgtccca
ccttctccagaagaagaagtgatttctgcctcttcttcctctttacaatgtttcagtatg
ttaaaggaccttgacacctcgggcacaaaggacagtcctggcacatccaaggccttgcta
acgcccgagggggtgacaacgcagcagcccgctcaagagaccagcccagacagtgacggt
gcaagagttagacagacaagtttgcagcagcagcttattcacgtgatggaccagatctgt
aaattagtcgatactattcctgatgatgaactgaaagctctggattgtgggaatgaactg
catcagcagcgggacataagaaggaagctcctggccgaagctgaccttaatacaagggac
gccagtattcttgcttcagggtggagatgcaggcctgactcacctggtagccctccggag
gggatggcctctgtttctgctctcgatgcgtttccaaagggcaattcctgtcctacaggg
aattctgttaaggagttaaattttccacaccttccctcacattccagttccactagggag
tgtttactggctactaccccgggaaagacaggattctcagccaccacgaagaatcccctt
gaaagaccgttattcagtccccatttacagaagtcctttgtaagtagcaactgggctgaa
acaccaaggatagaaaaaagaaatgaaagctcttacttcccgggaaatgttctcacaagc
acggctgtgaaagatcagaataaacgcgctgctccagtaaatgacttagaaagagaaatc
caggctgcctgtgatattgacacttttgacatagatggctttgatgacgatgatgatgat
gatgactgggaagatattatgcataatttagcagccagcaaatcttccacagctgcctgt
caacctattaaggaaggtcggccagttaagccagtatcagaaagaatttcttcagccaag
acaaactgtcttccagtggcatctactgctcaaaataaaaactcagagtcaattcagaat
tacactgataagtcggcacaaaatttagcatccagaaatctgaaacacgagcgtttccaa
agtcttagttttcctcatacaaaagaaatgatgaagatttttcataaaaaatttggcctg
cataattttagaactaatcagctagaggcgatcaatgctgcgctgctgggtgaagactgt
tttatcttaatgcccactggaggtggtaaaagtctgtgttaccagctccctgcctgtgtc
tctcctggtgtcactattgtcatttctcccttgagatcactcatagtagatcaagtccaa
aagctgacttccttggatattccagctacatatctgacaggtgataagactgactcagaa
gcaacaagtatttacgtgcaattatccaagaaagacccaattatcaaacttctatatgtt
actccagagaaggtctgtgcgagtaatagactgatttccactctggagaatctgtatgag
aggaagctcttggcacgttttgtcattgatgaagcacattgtgtcagtcagtggggacat
gattttcgccaagattataaaagaatgaatatgcttcgccagaagttcccttctgttcca
gtgatggcccttaccgccacagctaatcccagggtacagaaggacatcctcactcagctg
aagattctccaacctcaggtgttcagcatgagctttaacagacataatctgaaatactac
gtgttaccgaaaaaacccaagaaggtggcatttgattgcttagaatggatcagaaagcat
cacccaagtgactccgggataatctactgcctctccagacgagaatgtgacaccatggct
gacactttacagaaagatggtctcgctgcgcttgcttatcacgccggcctcagtgattct
gccagggatgaagtacagcacaagtggattaatcaggatggctgccaggttatctgtgca
acaatagcattcggaatggggattgacaaacccgacgtgcggtttgtgatccacgcgtct
ctccctaagtctgtggagggctactaccaggagtccggcagagctgggagagacggggag
atatcgcactgcctgctcttctatacctatcatgatgtgacccgactgaggaggctcata
ctaatggaaaaagatggaaaccatcataccagagagactcacttgaataatttgtatagt
atggtgcattactgtgaaaatataacagaatgcaggagaatacagcttttggcttacttt
ggtgaaaatggatttaatcctgatttttgtaagaaatacccagatgtttcttgtgataat
tgctgtaaaacaaaggattataagacaagagatgtgactgatgatgtagaaaatattgtc
agatttgttcaagaacatagttcatcgcaaggaacaagaaataaaaaccatataggtcct
tctgggagatttactatgaatatgctggtcgacattttcttggggagtaagagcgcaaaa
attcagtcggggatatttggaaagggctctacttactcacgacacaatgccgaaagactt
tttaaaaaactgatacttgacaagattttggatgaagacttatatatcaacgccaatgac
cagccgattgcctatgtaatgctgggaaataaagcccaaactgtactaaatgggcattta
aaggtagactttatggaaacggaaaattccaccagtgtgaaaaaacagaaagcgttagtg
gcaaagatatctcagagggaagaggtggtgaagaagtgtcttggagaactgacagaagtc
tgcaaatctctgggaaaagtttttggtgttcactacttcaatatttttaatactgtcact
ctcaagaagcttgcagaatctttatcttctgatcctgaggttttgcttcaaattgatggt
gttactgaagacaaactggaaaaatatggtgcagaagtgattccagtattacagaaatac
tctgagtggacattgccagctgaggacggttccccacggggaagcccgggcagccgcaga
ggcaccagaagacgcgccgccgaggagttcgatgaggaaacacccgtatcttctcactac
tttgcaaagaaaaccaaaagcgaaagaaagaggaagagaatgtcagcctcccaaaggcct
aagaggaggaaaaccagctttggtagctccaagaccgaaggggggtccaccgtgtgcaga
aagacatcttctaaaagtaaatcctccaacatatttggaccccattcctctgtgcatggt
tctcaagcagcatcaggagccactagaaaattggggattatggctccaccaaagcctata
aatagaccgtttcttaagccttcatatgcattttcataa
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integrated database retrieval system
