Mirounga leonina (Southern elephant seal): 118023947
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Entry
118023947 CDS
T07472
Symbol
STAU1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mlx01009
]
118023947 (STAU1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118023947 (STAU1)
Protein phosphatases and associated proteins [BR:
mlx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118023947 (STAU1)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118023947 (STAU1)
mRNA cycle factors
Stress granule specific factors
118023947 (STAU1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
118023947
NCBI-ProteinID:
XP_034881252
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSQVQVQVQNPSAALSGSQILNKNQSLLSQPLMSIPSTTSSLPSENAGRPIQNSALPSAS
LTPTSAAAVPSSMAHPKEKTPMCLVNELARFNKIQPEYKLLREQGPAHCKVFTVQLTLGD
QHWEAEGTSIKKAQHTAAAKALEGTKFPKPIVRPFRSEGRNPESITPTVELNALCMKLGK
KPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQ
AAKHDAAAKALRTLQSEPPPERPEGRRPGEQVNGRESEEENLNKSEISQVFEIALKRNLP
VNFESFPLKQVARESGPPHMKSFVTKVSVGEFVGEGEGKSKKISKKNAAIAVLEELKKLP
PLPTVERVKPRIKKKTKSIVRLQSSTDCGQGMNPISRLAQIQQAKKEKEPEYMLLTERGL
PRRREFVMQVKVGNHTAEGTGTNKKVAKRNAAENMLEILGFKVPQAQPTKPALKSEEKTP
IKKPGDGRKVTFFEPGSGDENGTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVSQG
HHTKDFTRAAPNPAKATVTAMIARELLYGGTSPTAETILKNNISSGHAPHGPLTRPSEQL
DYLSRVQGFQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLL
SELDQSSTEMPRTGNGPMSVCGRC
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagttcaagtgcaagttcagaacccatctgctgctctctcagggagccaaata
ctgaacaagaaccagtctcttctctcccagcctttgatgagtattccttctactactagc
tctctgccctctgaaaatgcaggtagacctattcaaaactctgctttaccctctgcatct
cttacacccaccagtgcagctgcagttccttctagcatggcacaccccaaagagaaaacc
ccaatgtgtcttgtgaatgagttagcccgtttcaacaagattcagcctgagtataagctt
ttgcgtgagcaaggtccagctcactgtaaggtgtttacagtacagctaacacttggagat
cagcactgggaagctgaaggaactagtattaaaaaagcccagcacacagctgctgccaaa
gctttggaaggaacaaaatttcctaaacccatagtccgcccttttcgtagcgaaggaagg
aatccagaaagcataacccctactgtagaactaaatgcactgtgcatgaaacttggaaaa
aaaccaatgtataagcctgtcgacccttactctcggatgcagtccacctataactacaac
atgagaggaggtgcttatcccccaaggtacttttacccatttccagtaccacctttactt
tatcaagttgagctttctgtgggaggacagcagtttaatgggaaaggcaagacgaggcag
gctgcgaaacacgacgctgctgcgaaagctttgaggaccctgcagagtgagcccccaccc
gagaggccggaggggaggcggccaggcgagcaggtgaatggaagagaatcagaagaagaa
aatctcaataaatcggaaatcagtcaagtgtttgagattgcacttaaacggaacttgcct
gtgaattttgagtctttccctctgaaacaggttgcccgggagagcggccccccccatatg
aagagctttgtgaccaaggtgtcagttggggagtttgttggggaaggtgaagggaagagc
aagaagatttcaaagaaaaacgctgctatcgctgtcctcgaggagctaaagaagctacca
cccctgcctacggtcgagcgagtgaagcccagaatcaaaaagaaaacaaaatccatagtc
aggctacagagcagcacagactgcggccaggggatgaacccgatcagcagactggcccag
atccagcaggcgaaaaaggagaaggagccagagtacatgctcctcacagagcgaggcctc
ccgcgccgcagagagtttgtgatgcaggtgaaggtgggaaaccataccgcagaaggaaca
ggcaccaacaagaaggtggccaaacgcaacgcagctgagaacatgttggagatccttggt
ttcaaagtcccacaggctcagcccaccaaaccagccctcaaatcagaggagaagacacca
ataaaaaaaccaggggatggaagaaaagtaaccttttttgaacctggctctggggatgaa
aatgggactagcaataaagaggatgagtttaggatgccttatcttagtcatcagcagctg
cccgcggggattcttcccatggtgcccgaggttgcccaggccgtaggagtcagtcaagga
caccacaccaaagatttcaccagggcagctccgaatccggccaaggccacggtaactgcc
atgatagcccgtgagttgttgtatgggggcacctcgcccacagccgagaccattttaaag
aataacatctcttcaggccacgcaccccatggacctcttacaagaccctctgagcagctg
gactatctttccagagtccagggattccaggttgaatacaaagacttccccaaaaacaac
aagaacgagtttgtatctcttatcaattgctcctctcagccacctctgatcagccatggt
attggaaaggatgtggagtcctgccatgacatggctgcactgaacatcttaaagctgctc
tctgagttggaccaatcgagtacagagatgccaagaacaggaaatggaccaatgtctgtg
tgtgggaggtgctga
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