KEGG   Mirounga leonina (Southern elephant seal): 118023992
Entry
118023992         CDS       T07472                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
mlx  Mirounga leonina (Southern elephant seal)
Pathway
mlx03013  Nucleocytoplasmic transport
mlx05014  Amyotrophic lateral sclerosis
mlx05164  Influenza A
Brite
KEGG Orthology (KO) [BR:mlx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118023992 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    118023992 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    118023992 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlx03019]
    118023992 (RAE1)
   03036 Chromosome and associated proteins [BR:mlx03036]
    118023992 (RAE1)
Messenger RNA biogenesis [BR:mlx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     118023992 (RAE1)
Chromosome and associated proteins [BR:mlx03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    118023992 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 118023992
NCBI-ProteinID: XP_034881329
LinkDB
Position
Unknown
AA seq 368 aa
MSLFGTTSGFGTSGTSMFGSTNTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgtttggaaccacctcgggttttggaactagtgggaccagcatgtttggcagc
acaaacacagataaccacaaccctatgaaggatattgaagtaacatcctctcctgatgac
agcattggttgtctatcttttagcccaccaaccttgcccggcaactttcttattgcagga
tcgtgggctaacgacgttcgctgctgggaagttcaagatagtggacagactattccaaaa
gcccagcagatgcacacggggcctgtgttagatgtctgctggagtgatgatgggagcaaa
gtatttacagcatcatgtgataaaactgccaaaatgtgggacctcaacagtaaccaggca
atacagattgcacagcacgatgctcctgtgaaaaccatacattggatcaaagcaccaaac
tacagctgtgtgatgaccgggagttgggataagactttgaagttttgggatacacgatca
tcaaatcccatgatggttttgcagctccctgaaagatgttactgtgccgatgtgatctac
ccaatggccgtggtggcaactgcagagagaggactgattgtctaccagttagagaatcaa
ccttctgagttcaggaggatagaatctccactgaaacatcagcatcgatgtgtggctatt
tttaaagacaaacagaacaagccgactggtttcgccctgggaagcattgaggggagggtt
gctattcactacatcaaccccccaaatcccgccaaagataactttaccttcaaatgtcac
cgctcgaacggaaccaatacttcagcccctcaggacatctatgcggtaaatgggatcgca
ttccatcctgtccatggcactcttgccactgtgggatctgatggtagattcagcttttgg
gacaaagatgccagaacgaaactaaaaacttcagaacagttagatcagccgatctcggct
tgctgcttcaatcacaatgggaacatatttgcctatgcttccagctacgactggtcaaag
ggacatgaattttataatccccaaaagaaaaattacattttcctgcgtaatgcagccgaa
gagctaaaacccaggaataagaagtag

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